BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007227
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   228   5e-58
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              228   5e-58
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   218   3e-55
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   214   6e-54
ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|3555...   214   8e-54

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  228 bits (580), Expect = 5e-58
 Identities = 105/142 (73%), Positives = 122/142 (85%)
 Frame = +2

Query: 2    DSDGGLITAVMIANQVKRQVDGFISMYYKGTMTCDDETCNFTSRSLNMRVIGESERGTVC 181
            + D G ++  +IANQVKRQ DGFISMYYKG+M CDDETC  T+ SLN+RVIG+SERGTVC
Sbjct: 1377 EGDVGRMSPALIANQVKRQADGFISMYYKGSMMCDDETCKHTTNSLNLRVIGDSERGTVC 1436

Query: 182  PNYPRCNGHLVRKYTEVDLYKQLSYFCHVLDAVRFIEKLDLKLRIPLEKDLARIRLVVDL 361
            PNYPRCNG LVRKYTE DLYKQLSYFCHVLD VR IEK+++  RIP+EK+LARIR +V+L
Sbjct: 1437 PNYPRCNGRLVRKYTEADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNL 1496

Query: 362  AASVVQKIRDRCAYGWIQMKDL 427
            AAS  QKIRDRCAYGW+Q+ DL
Sbjct: 1497 AASTTQKIRDRCAYGWVQLDDL 1518


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  228 bits (580), Expect = 5e-58
 Identities = 105/142 (73%), Positives = 122/142 (85%)
 Frame = +2

Query: 2    DSDGGLITAVMIANQVKRQVDGFISMYYKGTMTCDDETCNFTSRSLNMRVIGESERGTVC 181
            + D G ++  +IANQVKRQ DGFISMYYKG+M CDDETC  T+ SLN+RVIG+SERGTVC
Sbjct: 1416 EGDVGRMSPALIANQVKRQADGFISMYYKGSMMCDDETCKHTTNSLNLRVIGDSERGTVC 1475

Query: 182  PNYPRCNGHLVRKYTEVDLYKQLSYFCHVLDAVRFIEKLDLKLRIPLEKDLARIRLVVDL 361
            PNYPRCNG LVRKYTE DLYKQLSYFCHVLD VR IEK+++  RIP+EK+LARIR +V+L
Sbjct: 1476 PNYPRCNGRLVRKYTEADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNL 1535

Query: 362  AASVVQKIRDRCAYGWIQMKDL 427
            AAS  QKIRDRCAYGW+Q+ DL
Sbjct: 1536 AASTTQKIRDRCAYGWVQLDDL 1557


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  218 bits (556), Expect = 3e-55
 Identities = 99/138 (71%), Positives = 120/138 (86%)
 Frame = +2

Query: 14   GLITAVMIANQVKRQVDGFISMYYKGTMTCDDETCNFTSRSLNMRVIGESERGTVCPNYP 193
            G I++ +IANQVKRQV+GFIS YYKG M CDDETCN+T+RSLN+RVIG+SERGTVCPNYP
Sbjct: 1420 GNISSALIANQVKRQVEGFISTYYKGVMMCDDETCNYTTRSLNLRVIGDSERGTVCPNYP 1479

Query: 194  RCNGHLVRKYTEVDLYKQLSYFCHVLDAVRFIEKLDLKLRIPLEKDLARIRLVVDLAASV 373
            RCNGHL+R+YTE DLYKQL+YFC VLD VR IEK++  +R+ +EK+L RIR VV+ AAS 
Sbjct: 1480 RCNGHLLRQYTEADLYKQLAYFCFVLDTVRCIEKVESNMRLQVEKELVRIRPVVEAAAST 1539

Query: 374  VQKIRDRCAYGWIQMKDL 427
            V+K RDRCAY W+Q+KDL
Sbjct: 1540 VEKFRDRCAYSWVQLKDL 1557


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  214 bits (545), Expect = 6e-54
 Identities = 97/142 (68%), Positives = 118/142 (83%)
 Frame = +2

Query: 2    DSDGGLITAVMIANQVKRQVDGFISMYYKGTMTCDDETCNFTSRSLNMRVIGESERGTVC 181
            + D G I+  M+ANQVKRQ +GF+SMYYKG MTCDDETC   +RSLN+R+IG+SERGTVC
Sbjct: 1381 EGDTGRISPAMLANQVKRQAEGFVSMYYKGLMTCDDETCKHITRSLNLRLIGDSERGTVC 1440

Query: 182  PNYPRCNGHLVRKYTEVDLYKQLSYFCHVLDAVRFIEKLDLKLRIPLEKDLARIRLVVDL 361
            PNYPRCNG LVRKYTE +LYKQLS++C++LD VR +EK+D   RI LEK + +IR +VDL
Sbjct: 1441 PNYPRCNGRLVRKYTEAELYKQLSFYCYLLDTVRCMEKMDAGTRISLEKKITKIRPMVDL 1500

Query: 362  AASVVQKIRDRCAYGWIQMKDL 427
            A S VQKIRDRCAYGW+Q+ DL
Sbjct: 1501 AVSTVQKIRDRCAYGWVQLSDL 1522


>ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|355513051|gb|AES94674.1|
           DNA polymerase [Medicago truncatula]
          Length = 611

 Score =  214 bits (544), Expect = 8e-54
 Identities = 94/142 (66%), Positives = 120/142 (84%)
 Frame = +2

Query: 2   DSDGGLITAVMIANQVKRQVDGFISMYYKGTMTCDDETCNFTSRSLNMRVIGESERGTVC 181
           ++  G I+A MIANQVKRQ + F+ MYY+G + CDDETC  T+RS++ R++G+SERGTVC
Sbjct: 466 ENGAGRISAAMIANQVKRQAEKFVLMYYRGLLMCDDETCKHTTRSVSFRLVGDSERGTVC 525

Query: 182 PNYPRCNGHLVRKYTEVDLYKQLSYFCHVLDAVRFIEKLDLKLRIPLEKDLARIRLVVDL 361
           PNYPRCNGHL RKYTE DLYKQLSYFCHV D V +IEK++ K RIP+EK+L +IR +VDL
Sbjct: 526 PNYPRCNGHLNRKYTEADLYKQLSYFCHVFDTVCYIEKMEAKSRIPIEKELIKIRPIVDL 585

Query: 362 AASVVQKIRDRCAYGWIQMKDL 427
           AAS +QKIRDRCA+GW++++DL
Sbjct: 586 AASTIQKIRDRCAFGWVKLQDL 607