BLASTX nr result
ID: Coptis23_contig00007220
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00007220 (683 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|2... 91 3e-16 ref|XP_002522017.1| Translational activator GCN1, putative [Rici... 88 1e-15 ref|XP_003553769.1| PREDICTED: translational activator GCN1-like... 88 2e-15 ref|XP_003631859.1| PREDICTED: translational activator GCN1 isof... 87 2e-15 ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof... 87 2e-15 >ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|222862668|gb|EEF00175.1| predicted protein [Populus trichocarpa] Length = 865 Score = 90.5 bits (223), Expect = 3e-16 Identities = 41/46 (89%), Positives = 46/46 (100%) Frame = +3 Query: 3 VLGSVPREVLPSYIKLVRDAISTSRDKERRKRKGGPVLIPGFCLPK 140 V+GSVP+EVLPSYIKLVRDA+STSRDKERRK+KGGPV+IPGFCLPK Sbjct: 416 VIGSVPKEVLPSYIKLVRDAVSTSRDKERRKKKGGPVVIPGFCLPK 461 >ref|XP_002522017.1| Translational activator GCN1, putative [Ricinus communis] gi|223538821|gb|EEF40421.1| Translational activator GCN1, putative [Ricinus communis] Length = 2459 Score = 88.2 bits (217), Expect = 1e-15 Identities = 40/46 (86%), Positives = 45/46 (97%) Frame = +3 Query: 3 VLGSVPREVLPSYIKLVRDAISTSRDKERRKRKGGPVLIPGFCLPK 140 V+ SVP+EVLPSY+KLVRDA+STSRDKERRK+KGGPVLIPGFCLPK Sbjct: 2010 VVSSVPKEVLPSYLKLVRDAVSTSRDKERRKKKGGPVLIPGFCLPK 2055 >ref|XP_003553769.1| PREDICTED: translational activator GCN1-like [Glycine max] Length = 2870 Score = 87.8 bits (216), Expect = 2e-15 Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +3 Query: 3 VLGSVPREVLPSYIKLVRDAISTSRDKERRKRKGGPVLIPGFCLPK 140 V+ SVP+EVLPSYIKLVRDA+STSRDKERRK+KGGPVLIPGFCLPK Sbjct: 2421 VIISVPKEVLPSYIKLVRDAVSTSRDKERRKKKGGPVLIPGFCLPK 2466 >ref|XP_003631859.1| PREDICTED: translational activator GCN1 isoform 2 [Vitis vinifera] Length = 2461 Score = 87.4 bits (215), Expect = 2e-15 Identities = 40/46 (86%), Positives = 44/46 (95%) Frame = +3 Query: 3 VLGSVPREVLPSYIKLVRDAISTSRDKERRKRKGGPVLIPGFCLPK 140 V SVP+EVLPSYIK+VRDA+STSRDKERRK+KGGPVLIPGFCLPK Sbjct: 2012 VTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPK 2057 >ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera] Length = 2613 Score = 87.4 bits (215), Expect = 2e-15 Identities = 40/46 (86%), Positives = 44/46 (95%) Frame = +3 Query: 3 VLGSVPREVLPSYIKLVRDAISTSRDKERRKRKGGPVLIPGFCLPK 140 V SVP+EVLPSYIK+VRDA+STSRDKERRK+KGGPVLIPGFCLPK Sbjct: 2164 VTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPK 2209