BLASTX nr result

ID: Coptis23_contig00007220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007220
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|2...    91   3e-16
ref|XP_002522017.1| Translational activator GCN1, putative [Rici...    88   1e-15
ref|XP_003553769.1| PREDICTED: translational activator GCN1-like...    88   2e-15
ref|XP_003631859.1| PREDICTED: translational activator GCN1 isof...    87   2e-15
ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof...    87   2e-15

>ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|222862668|gb|EEF00175.1|
           predicted protein [Populus trichocarpa]
          Length = 865

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 41/46 (89%), Positives = 46/46 (100%)
 Frame = +3

Query: 3   VLGSVPREVLPSYIKLVRDAISTSRDKERRKRKGGPVLIPGFCLPK 140
           V+GSVP+EVLPSYIKLVRDA+STSRDKERRK+KGGPV+IPGFCLPK
Sbjct: 416 VIGSVPKEVLPSYIKLVRDAVSTSRDKERRKKKGGPVVIPGFCLPK 461


>ref|XP_002522017.1| Translational activator GCN1, putative [Ricinus communis]
            gi|223538821|gb|EEF40421.1| Translational activator GCN1,
            putative [Ricinus communis]
          Length = 2459

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 40/46 (86%), Positives = 45/46 (97%)
 Frame = +3

Query: 3    VLGSVPREVLPSYIKLVRDAISTSRDKERRKRKGGPVLIPGFCLPK 140
            V+ SVP+EVLPSY+KLVRDA+STSRDKERRK+KGGPVLIPGFCLPK
Sbjct: 2010 VVSSVPKEVLPSYLKLVRDAVSTSRDKERRKKKGGPVLIPGFCLPK 2055


>ref|XP_003553769.1| PREDICTED: translational activator GCN1-like [Glycine max]
          Length = 2870

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 41/46 (89%), Positives = 45/46 (97%)
 Frame = +3

Query: 3    VLGSVPREVLPSYIKLVRDAISTSRDKERRKRKGGPVLIPGFCLPK 140
            V+ SVP+EVLPSYIKLVRDA+STSRDKERRK+KGGPVLIPGFCLPK
Sbjct: 2421 VIISVPKEVLPSYIKLVRDAVSTSRDKERRKKKGGPVLIPGFCLPK 2466


>ref|XP_003631859.1| PREDICTED: translational activator GCN1 isoform 2 [Vitis vinifera]
          Length = 2461

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 40/46 (86%), Positives = 44/46 (95%)
 Frame = +3

Query: 3    VLGSVPREVLPSYIKLVRDAISTSRDKERRKRKGGPVLIPGFCLPK 140
            V  SVP+EVLPSYIK+VRDA+STSRDKERRK+KGGPVLIPGFCLPK
Sbjct: 2012 VTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPK 2057


>ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera]
          Length = 2613

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 40/46 (86%), Positives = 44/46 (95%)
 Frame = +3

Query: 3    VLGSVPREVLPSYIKLVRDAISTSRDKERRKRKGGPVLIPGFCLPK 140
            V  SVP+EVLPSYIK+VRDA+STSRDKERRK+KGGPVLIPGFCLPK
Sbjct: 2164 VTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPK 2209


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