BLASTX nr result

ID: Coptis23_contig00007213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007213
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002881687.1| peroxisomal membrane protein [Arabidopsis ly...   372   e-100
gb|AAM65850.1| putative peroxisomal membrane carrier protein [Ar...   371   e-100
ref|NP_181526.1| solute carrier family 25 member 17 [Arabidopsis...   369   e-100
ref|XP_002315175.1| predicted protein [Populus trichocarpa] gi|2...   369   e-100
emb|CBI31533.3| unnamed protein product [Vitis vinifera]              366   4e-99

>ref|XP_002881687.1| peroxisomal membrane protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327526|gb|EFH57946.1| peroxisomal membrane protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 331

 Score =  372 bits (954), Expect = e-100
 Identities = 191/256 (74%), Positives = 220/256 (85%), Gaps = 1/256 (0%)
 Frame = -3

Query: 989 GTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAISGCVNVLLTNPI 810
           GTAASQGVYYYFYQ+FR++AEATA  R KKG GDG+VGMF+SL+VAA +G VNVL+TNPI
Sbjct: 73  GTAASQGVYYYFYQVFRNQAEATALARKKKGLGDGSVGMFASLLVAAFAGSVNVLMTNPI 132

Query: 809 WVVVTRMQTHKKGLIEDKLTHNIS-SDDSVQIAAIEPPPYGTTNAVQEVYGEAGIRGFWK 633
           WV+VTRMQTH+K + +D+   ++S S D+  +  +EP PYGT N +QEVY EAG+ GFWK
Sbjct: 133 WVIVTRMQTHRK-MTKDQTAASVSPSSDAEALVTVEPRPYGTFNTIQEVYDEAGVTGFWK 191

Query: 632 GVFPTLIMVSNPSIQFMLYETXXXXXKARRAEKGNTGVTALEVFLLGAVAKLGATVMTYP 453
           GV PTLIMVSNP++QFMLYET     K +RA KG+  VTALE FLLGAVAKLGATV TYP
Sbjct: 192 GVIPTLIMVSNPAMQFMLYETMLTKLKKKRALKGSNSVTALETFLLGAVAKLGATVTTYP 251

Query: 452 LLVVKSRLQAKQVTGGDKQHQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLF 273
           LLVVKSRLQAKQVT GDK+HQYKGTLDAILKMI+YEGLYGFYKGMSTKIVQSVLAAAVLF
Sbjct: 252 LLVVKSRLQAKQVTTGDKRHQYKGTLDAILKMIQYEGLYGFYKGMSTKIVQSVLAAAVLF 311

Query: 272 MIKEELVKWARLLLTS 225
           MIKEELVK A+LLL++
Sbjct: 312 MIKEELVKGAKLLLSN 327


>gb|AAM65850.1| putative peroxisomal membrane carrier protein [Arabidopsis
           thaliana]
          Length = 331

 Score =  371 bits (952), Expect = e-100
 Identities = 194/260 (74%), Positives = 216/260 (83%)
 Frame = -3

Query: 989 GTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAISGCVNVLLTNPI 810
           GTAASQGVYYYFYQ+FR++AEATA  R KKG GDG+VGMF+SL+VAA +G VNVL+TNPI
Sbjct: 73  GTAASQGVYYYFYQVFRNRAEATALARKKKGLGDGSVGMFASLLVAAFAGSVNVLMTNPI 132

Query: 809 WVVVTRMQTHKKGLIEDKLTHNISSDDSVQIAAIEPPPYGTTNAVQEVYGEAGIRGFWKG 630
           WV+VTRMQTH+K   +        S ++  + A+EP PYGT N ++EVY EAGI GFWKG
Sbjct: 133 WVIVTRMQTHRKMTKDQTAAPESPSSNAEALVAVEPRPYGTFNTIREVYDEAGITGFWKG 192

Query: 629 VFPTLIMVSNPSIQFMLYETXXXXXKARRAEKGNTGVTALEVFLLGAVAKLGATVMTYPL 450
           V PTLIMVSNPS+QFMLYET     K +RA KG+  VTALE FLLGAVAKLGATV TYPL
Sbjct: 193 VIPTLIMVSNPSMQFMLYETMLTKLKKKRALKGSNNVTALETFLLGAVAKLGATVTTYPL 252

Query: 449 LVVKSRLQAKQVTGGDKQHQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFM 270
           LVVKSRLQAKQVT GDK+ QYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFM
Sbjct: 253 LVVKSRLQAKQVTTGDKRQQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFM 312

Query: 269 IKEELVKWARLLLTSNVVSI 210
           IKEELVK A+LLL SN  SI
Sbjct: 313 IKEELVKGAKLLL-SNATSI 331


>ref|NP_181526.1| solute carrier family 25 member 17 [Arabidopsis thaliana]
           gi|75218946|sp|O04200.1|PXN_ARATH RecName:
           Full=Peroxisomal nicotinamide adenine dinucleotide
           carrier; AltName: Full=Peroxisomal NAD carrier; AltName:
           Full=Peroxisomal membrane protein 38, (PMP36);
           Short=AtPMP38; AltName: Full=Protein ABERRANT PEROXISOME
           MORPHOLOGY 3; AltName: Full=Solute carrier family 25
           member 17 gi|2088650|gb|AAB95282.1| putative peroxisomal
           membrane carrier protein [Arabidopsis thaliana]
           gi|14532468|gb|AAK63962.1| At2g39970/T28M21.13
           [Arabidopsis thaliana] gi|15146342|dbj|BAB62814.1|
           36kDa-peroxisomal membrane protein (PMP36) [Arabidopsis
           thaliana] gi|27764928|gb|AAO23585.1| At2g39970/T28M21.13
           [Arabidopsis thaliana] gi|330254663|gb|AEC09757.1|
           solute carrier family 25 member 17 [Arabidopsis
           thaliana]
          Length = 331

 Score =  369 bits (948), Expect = e-100
 Identities = 190/255 (74%), Positives = 214/255 (83%)
 Frame = -3

Query: 989 GTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAISGCVNVLLTNPI 810
           GTAASQGVYYYFYQ+FR++AEATA  R KKG GDG+VGMF+SL+VAA +G VNVL+TNPI
Sbjct: 73  GTAASQGVYYYFYQVFRNRAEATALARKKKGLGDGSVGMFASLLVAAFAGSVNVLMTNPI 132

Query: 809 WVVVTRMQTHKKGLIEDKLTHNISSDDSVQIAAIEPPPYGTTNAVQEVYGEAGIRGFWKG 630
           WV+VTRMQTH+K   +        S ++  + A+EP PYGT N ++EVY EAGI GFWKG
Sbjct: 133 WVIVTRMQTHRKMTKDQTAAPESPSSNAEALVAVEPRPYGTFNTIREVYDEAGITGFWKG 192

Query: 629 VFPTLIMVSNPSIQFMLYETXXXXXKARRAEKGNTGVTALEVFLLGAVAKLGATVMTYPL 450
           V PTLIMVSNPS+QFMLYET     K +RA KG+  VTALE FLLGAVAKLGATV TYPL
Sbjct: 193 VIPTLIMVSNPSMQFMLYETMLTKLKKKRALKGSNNVTALETFLLGAVAKLGATVTTYPL 252

Query: 449 LVVKSRLQAKQVTGGDKQHQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFM 270
           LVVKSRLQAKQVT GDK+ QYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFM
Sbjct: 253 LVVKSRLQAKQVTTGDKRQQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFM 312

Query: 269 IKEELVKWARLLLTS 225
           IKEELVK A+LLL++
Sbjct: 313 IKEELVKGAKLLLSN 327


>ref|XP_002315175.1| predicted protein [Populus trichocarpa] gi|222864215|gb|EEF01346.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  369 bits (946), Expect = e-100
 Identities = 190/266 (71%), Positives = 220/266 (82%), Gaps = 2/266 (0%)
 Frame = -3

Query: 989 GTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAISGCVNVLLTNPI 810
           GTA SQGVYYYFYQIFRD+AEA AR   + G GDG+VGM SSL+VAA++GC NVLLTNPI
Sbjct: 73  GTACSQGVYYYFYQIFRDRAEAIARENKRNGIGDGSVGMLSSLMVAALAGCTNVLLTNPI 132

Query: 809 WVVVTRMQTHKKGLIEDKLTHNISSDDSVQIAAIEPPPYGTTNAVQEVYGEAGIRGFWKG 630
           WVVVTRMQTH K   + +  H+  + D   +  IE PPYGT +A+QE+Y EAGI+GFWKG
Sbjct: 133 WVVVTRMQTHTKNSNKSQPGHSSIAPDEKALDPIECPPYGTGHAIQELYDEAGIQGFWKG 192

Query: 629 VFPTLIMVSNPSIQFMLYETXXXXXKARRA--EKGNTGVTALEVFLLGAVAKLGATVMTY 456
           VFPTLIMVSNPS+QFMLYET     K +RA  ++G+TGVTALE+FLLGA+AKLGATV+TY
Sbjct: 193 VFPTLIMVSNPSMQFMLYETMLKKLKRKRALVKQGDTGVTALEIFLLGALAKLGATVVTY 252

Query: 455 PLLVVKSRLQAKQVTGGDKQHQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVL 276
           PLLVVKSRLQAKQ T GDK+H Y+GTLDAILKMIRYEGL+GFYKGMSTKIVQSVLAAAVL
Sbjct: 253 PLLVVKSRLQAKQTTTGDKRHNYEGTLDAILKMIRYEGLHGFYKGMSTKIVQSVLAAAVL 312

Query: 275 FMIKEELVKWARLLLTSNVVSINKVK 198
           FMIKEELV+ AR+LLT    S  + +
Sbjct: 313 FMIKEELVRGARMLLTKGGASTARTR 338


>emb|CBI31533.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  366 bits (940), Expect = 4e-99
 Identities = 189/262 (72%), Positives = 220/262 (83%), Gaps = 3/262 (1%)
 Frame = -3

Query: 989 GTAASQGVYYYFYQIFRDKAEATARYRLKKGTGDGTVGMFSSLVVAAISGCVNVLLTNPI 810
           GTAASQGVYYYFYQIFR+KAEA+A  R+K G GDG+VGMFSSLVVAA+SGCVNVLLTNPI
Sbjct: 73  GTAASQGVYYYFYQIFRNKAEASALERMKNGIGDGSVGMFSSLVVAALSGCVNVLLTNPI 132

Query: 809 WVVVTRMQTHKKGLIEDKLTHNIS-SDDSVQIAAIEPPPYGTTNAVQEVYGEAGIRGFWK 633
           WV+VTRMQTH K   + K  ++ + + +   ++AIEP PYGT++A+QEVYGEAG+RGFWK
Sbjct: 133 WVIVTRMQTHTKISKQSKPIYSPAVAANEAAVSAIEPTPYGTSHAIQEVYGEAGVRGFWK 192

Query: 632 GVFPTLIMVSNPSIQFMLYETXXXXXKARRA--EKGNTGVTALEVFLLGAVAKLGATVMT 459
           GV PTLIMVSNPSIQFMLYET     + RRA  +K + G+TA E+FLLGA+AKLGATV+T
Sbjct: 193 GVLPTLIMVSNPSIQFMLYETMLKKLRKRRASQKKDSGGITASEIFLLGALAKLGATVVT 252

Query: 458 YPLLVVKSRLQAKQVTGGDKQHQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAV 279
           YPLLVVKSRLQAKQV GGDK+H YKGT DAI KMI YEG  GFYKGM+TKIVQSVLAAAV
Sbjct: 253 YPLLVVKSRLQAKQVAGGDKRHHYKGTCDAIGKMIHYEGFAGFYKGMNTKIVQSVLAAAV 312

Query: 278 LFMIKEELVKWARLLLTSNVVS 213
           LFM+KEELV+  RLLL+  V +
Sbjct: 313 LFMVKEELVRGVRLLLSKKVTN 334


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