BLASTX nr result

ID: Coptis23_contig00007206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007206
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531053.1| conserved hypothetical protein [Ricinus comm...   139   2e-31
ref|XP_004158645.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   138   5e-31
ref|XP_004134564.1| PREDICTED: uncharacterized membrane protein ...   138   5e-31
ref|XP_002300337.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
ref|XP_002280109.1| PREDICTED: uncharacterized membrane protein ...   137   1e-30

>ref|XP_002531053.1| conserved hypothetical protein [Ricinus communis]
           gi|223529348|gb|EEF31314.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 641

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/97 (70%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
 Frame = +2

Query: 35  MDFSSFLTSLATSCIIFVILMLVFSWLSKKPSNHVIYYPNRILKGLEPYD--SPRRSTFA 208
           MDFSSFLTSLATS +IF++LM +F+WLS++P N V+YYPNRILKGLEP++  S  R+ FA
Sbjct: 1   MDFSSFLTSLATSFVIFLVLMFLFTWLSRRPGNAVVYYPNRILKGLEPWEGGSRTRNPFA 60

Query: 209 WVKEACTSTEADIISISGVDTAVYFVFLSTVLGILTL 319
           W++EA +STE DII +SGVDTAVYFVFLSTVL IL L
Sbjct: 61  WIREAMSSTEQDIIDMSGVDTAVYFVFLSTVLSILVL 97


>ref|XP_004158645.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized membrane protein
           C2G11.09-like [Cucumis sativus]
          Length = 725

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/96 (70%), Positives = 81/96 (84%), Gaps = 1/96 (1%)
 Frame = +2

Query: 35  MDFSSFLTSLATSCIIFVILMLVFSWLSKKPSNHVIYYPNRILKGLEP-YDSPRRSTFAW 211
           MDFSSFLTSL TS +IF++LMLVF+WLS +P NHVIYYPNRILKGL+P   S  RS FAW
Sbjct: 1   MDFSSFLTSLGTSFVIFLVLMLVFAWLSSRPCNHVIYYPNRILKGLDPTVGSRSRSPFAW 60

Query: 212 VKEACTSTEADIISISGVDTAVYFVFLSTVLGILTL 319
           + EA +S+E D+IS+SGVD+AVYFVFL+TVLGI  L
Sbjct: 61  ITEALSSSEKDVISMSGVDSAVYFVFLATVLGIFVL 96


>ref|XP_004134564.1| PREDICTED: uncharacterized membrane protein C2G11.09-like [Cucumis
           sativus]
          Length = 725

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/96 (70%), Positives = 81/96 (84%), Gaps = 1/96 (1%)
 Frame = +2

Query: 35  MDFSSFLTSLATSCIIFVILMLVFSWLSKKPSNHVIYYPNRILKGLEP-YDSPRRSTFAW 211
           MDFSSFLTSL TS +IF++LMLVF+WLS +P NHVIYYPNRILKGL+P   S  RS FAW
Sbjct: 1   MDFSSFLTSLGTSFVIFLVLMLVFAWLSSRPCNHVIYYPNRILKGLDPTVGSRSRSPFAW 60

Query: 212 VKEACTSTEADIISISGVDTAVYFVFLSTVLGILTL 319
           + EA +S+E D+IS+SGVD+AVYFVFL+TVLGI  L
Sbjct: 61  ITEALSSSEKDVISMSGVDSAVYFVFLATVLGIFVL 96


>ref|XP_002300337.1| predicted protein [Populus trichocarpa] gi|222847595|gb|EEE85142.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/97 (69%), Positives = 82/97 (84%), Gaps = 2/97 (2%)
 Frame = +2

Query: 35  MDFSSFLTSLATSCIIFVILMLVFSWLSKKPSNHVIYYPNRILKGLEPYD--SPRRSTFA 208
           MDFSSFLTSL TS +IFV+LML+F+WLS+KP N  +YYPNRILKGLEP+D  S  R+ FA
Sbjct: 1   MDFSSFLTSLGTSFLIFVVLMLLFTWLSRKPGNSFVYYPNRILKGLEPWDGASRSRNPFA 60

Query: 209 WVKEACTSTEADIISISGVDTAVYFVFLSTVLGILTL 319
           W++EA +S+E D+I++SGVDTAVYFVFLST L IL L
Sbjct: 61  WIREAFSSSEQDVINMSGVDTAVYFVFLSTALAILVL 97


>ref|XP_002280109.1| PREDICTED: uncharacterized membrane protein C24H6.13-like [Vitis
           vinifera]
          Length = 724

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/97 (68%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
 Frame = +2

Query: 35  MDFSSFLTSLATSCIIFVILMLVFSWLSKKPSNHVIYYPNRILKGLEPYDSPR--RSTFA 208
           MDFSSFLTSL TS +IFV+LML+F+WLS+KP N VIYYPNRILKG++P++  +  R+ FA
Sbjct: 1   MDFSSFLTSLGTSFLIFVVLMLLFAWLSRKPGNSVIYYPNRILKGMDPWEGGKRTRNPFA 60

Query: 209 WVKEACTSTEADIISISGVDTAVYFVFLSTVLGILTL 319
           W++EA TS+E D+IS+SGVD+AVY VFLST LGIL L
Sbjct: 61  WIREAITSSEDDVISMSGVDSAVYLVFLSTALGILIL 97


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