BLASTX nr result

ID: Coptis23_contig00007198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007198
         (1322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21017.3| unnamed protein product [Vitis vinifera]              214   5e-53
ref|XP_002285025.2| PREDICTED: uncharacterized protein LOC100254...   201   3e-49
emb|CAN81198.1| hypothetical protein VITISV_036369 [Vitis vinifera]   200   6e-49
ref|XP_004136474.1| PREDICTED: uncharacterized protein LOC101218...   186   2e-44
ref|XP_002515539.1| conserved hypothetical protein [Ricinus comm...   181   4e-43

>emb|CBI21017.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  214 bits (544), Expect = 5e-53
 Identities = 133/253 (52%), Positives = 150/253 (59%), Gaps = 20/253 (7%)
 Frame = +3

Query: 321  ALFSLLEEDLKNDLSSXXXXXXXXXXXXXXXXXXXX----GSDDELSGLLNS-------- 464
            ALF+ LEEDLKND  S                        G DDEL G+ NS        
Sbjct: 87   ALFNQLEEDLKNDSPSIDDNDEEISEEDLARLERELEEALGDDDELLGMFNSITDEIESN 146

Query: 465  -EKSXXXXXXXXXRPVELKKWQLRRLASALKIGRRKTSIKSLAAELCLDRAVVXXXXXXX 641
             +           RPV+LK WQLRRLASALK GRRKTSIKSLAAELCLDRAVV       
Sbjct: 147  NDAEEVEDDEDEERPVKLKNWQLRRLASALKTGRRKTSIKSLAAELCLDRAVVLELLREP 206

Query: 642  XXXXXXXXXXXXHRIVQT-TLXXXXXXXXXXXXFTKDVLE----PQPEV--KLPVDMMQS 800
                         + V T T+             T+  +E     +PEV  K+PV +MQS
Sbjct: 207  PPNLLLMSAALPDKPVPTITVPETEPVEAVPLDTTRGAVEAAEPAEPEVKGKVPVHVMQS 266

Query: 801  RWSMQKRLKKVQLETLERVYNRTKRPTNAMISSVVHVTNLPRKRVVKWFEDKRAEDGVPH 980
            RWS QKRLKKVQ+ETLERVY RTKRPTNAMISS+VHVTNLPRKRVVKWFEDKR EDGVP 
Sbjct: 267  RWSAQKRLKKVQVETLERVYRRTKRPTNAMISSIVHVTNLPRKRVVKWFEDKRTEDGVPE 326

Query: 981  NRLPYQPSTSESM 1019
            +RLP+Q STSE++
Sbjct: 327  HRLPFQRSTSETV 339


>ref|XP_002285025.2| PREDICTED: uncharacterized protein LOC100254226 [Vitis vinifera]
          Length = 402

 Score =  201 bits (511), Expect = 3e-49
 Identities = 130/266 (48%), Positives = 145/266 (54%), Gaps = 40/266 (15%)
 Frame = +3

Query: 321 ALFSLLEEDLKNDLSSXXXXXXXXXXXXXXXXXXXX----GSDDELSGLLNS-------- 464
           ALF+ LEEDLKND  S                        G DDEL G+ NS        
Sbjct: 87  ALFNQLEEDLKNDSPSIDDNDEEISEEDLARLERELEEALGDDDELLGMFNSITDEIESN 146

Query: 465 ---------------------EKSXXXXXXXXXRPVELKKWQLRRLASALKIGRRKTSIK 581
                                E+          RPV+LK WQLRRLASALK GRRKTSIK
Sbjct: 147 NDAEEVGAEVEEEEEEEEDEEEEEEEEDDEDEERPVKLKNWQLRRLASALKTGRRKTSIK 206

Query: 582 SLAAELCLDRAVVXXXXXXXXXXXXXXXXXXXHRIVQT-TLXXXXXXXXXXXXFTKDVLE 758
           SLAAELCLDRAVV                    + V T T+             T+  +E
Sbjct: 207 SLAAELCLDRAVVLELLREPPPNLLLMSAALPDKPVPTITVPETEPVEAVPLDTTRGAVE 266

Query: 759 ----PQPEV--KLPVDMMQSRWSMQKRLKKVQLETLERVYNRTKRPTNAMISSVVHVTNL 920
                +PEV  K+PV +MQSRWS QKRLKKVQ+ETLERVY RTKRPTNAMISS+VHVTNL
Sbjct: 267 AAEPAEPEVKGKVPVHVMQSRWSAQKRLKKVQVETLERVYRRTKRPTNAMISSIVHVTNL 326

Query: 921 PRKRVVKWFEDKRAEDGVPHNRLPYQ 998
           PRKRVVKWFEDKR EDGVP +RLP+Q
Sbjct: 327 PRKRVVKWFEDKRTEDGVPEHRLPFQ 352


>emb|CAN81198.1| hypothetical protein VITISV_036369 [Vitis vinifera]
          Length = 282

 Score =  200 bits (509), Expect = 6e-49
 Identities = 113/180 (62%), Positives = 127/180 (70%), Gaps = 7/180 (3%)
 Frame = +3

Query: 501  RPVELKKWQLRRLASALKIGRRKTSIKSLAAELCLDRAVVXXXXXXXXXXXXXXXXXXXH 680
            RPV+LK WQLRRLASALK GRRKTSIKSLAAELCLDRAVV                    
Sbjct: 100  RPVKLKNWQLRRLASALKTGRRKTSIKSLAAELCLDRAVVLELLREPPPNLLLMSAALPD 159

Query: 681  RIVQT-TLXXXXXXXXXXXXFTKDVLE----PQPEV--KLPVDMMQSRWSMQKRLKKVQL 839
            + V T T+             T+  +E     +PEV  K+PV +MQSRWS QKRLKKVQ+
Sbjct: 160  KPVPTITVPETEPVEAVPLDTTRGAVEAAEPAEPEVKGKVPVHVMQSRWSAQKRLKKVQV 219

Query: 840  ETLERVYNRTKRPTNAMISSVVHVTNLPRKRVVKWFEDKRAEDGVPHNRLPYQPSTSESM 1019
            ETLERVY RTKRPTNAMISS+VHVTNLPRKRVVKWFEDKR EDGVP +RLP+Q STSE++
Sbjct: 220  ETLERVYRRTKRPTNAMISSIVHVTNLPRKRVVKWFEDKRTEDGVPEHRLPFQRSTSETV 279


>ref|XP_004136474.1| PREDICTED: uncharacterized protein LOC101218040 [Cucumis sativus]
          Length = 324

 Score =  186 bits (471), Expect = 2e-44
 Identities = 116/248 (46%), Positives = 131/248 (52%), Gaps = 17/248 (6%)
 Frame = +3

Query: 324  LFSLLEEDLKNDLSSXXXXXXXXXXXXXXXXXXXXGSDDELS-----------GLL---- 458
            LFS LEEDLKND SS                    G DDE S           GL     
Sbjct: 93   LFSQLEEDLKNDASSLDE-----------------GEDDEFSEEDLARLERELGLALGID 135

Query: 459  --NSEKSXXXXXXXXXRPVELKKWQLRRLASALKIGRRKTSIKSLAAELCLDRAVVXXXX 632
                E+           PV+LK WQLRRLA ALK GRRKTSIKSLAAELCLDR VV    
Sbjct: 136  VDEEEEEAEEDDEEEEMPVKLKNWQLRRLALALKKGRRKTSIKSLAAELCLDRTVVLELL 195

Query: 633  XXXXXXXXXXXXXXXHRIVQTTLXXXXXXXXXXXXFTKDVLEPQPEVKLPVDMMQSRWSM 812
                                + +               D  + +   K+PV +MQ  W+ 
Sbjct: 196  REPPPNLLMLSASLPDTPKPSIIETKTLQTTDEEPLVVDTAKEEEVTKVPVHVMQQSWAA 255

Query: 813  QKRLKKVQLETLERVYNRTKRPTNAMISSVVHVTNLPRKRVVKWFEDKRAEDGVPHNRLP 992
            QKRLKKVQ+ETLERVY RTKRPTNAMISS+V VTNLPRKR+VKWFEDKR EDGVP  RLP
Sbjct: 256  QKRLKKVQIETLERVYRRTKRPTNAMISSIVQVTNLPRKRIVKWFEDKRVEDGVPDPRLP 315

Query: 993  YQPSTSES 1016
            +  S+ +S
Sbjct: 316  FDRSSPQS 323


>ref|XP_002515539.1| conserved hypothetical protein [Ricinus communis]
            gi|223545483|gb|EEF46988.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 338

 Score =  181 bits (459), Expect = 4e-43
 Identities = 114/249 (45%), Positives = 136/249 (54%), Gaps = 17/249 (6%)
 Frame = +3

Query: 324  LFSLLEEDLKNDLS-------SXXXXXXXXXXXXXXXXXXXXGSD--DELSGLLNSE--- 467
            LF++LEEDLKND S                            G D  DE   LL+S+   
Sbjct: 87   LFNMLEEDLKNDKSLASDDDDDDISEEDFEKLQRELEAALGIGEDENDEDVNLLSSDAHD 146

Query: 468  ---KSXXXXXXXXXRPVELKKWQLRRLASALKIGRRKTSIKSLAAELCLDRAVVXXXXXX 638
               ++         RPV++K WQ+RRLA  LK GRR+TSIKSLAAELCLDRA+V      
Sbjct: 147  VEHENIEDDDEEEERPVKVKNWQMRRLARTLKNGRRRTSIKSLAAELCLDRAIVLELLRD 206

Query: 639  XXXXXXXXXXXXXHRIVQTTLXXXXXXXXXXXXFTK--DVLEPQPEVKLPVDMMQSRWSM 812
                              T L             T   D +  + E K+PV +M+  W+ 
Sbjct: 207  PPPNLVMMSAALRDEPESTPLMAKAEPIEVIPMETSKVDDMNSESEKKVPVHVMRHSWTA 266

Query: 813  QKRLKKVQLETLERVYNRTKRPTNAMISSVVHVTNLPRKRVVKWFEDKRAEDGVPHNRLP 992
            QKRLKKV +ETLERVY RTKRPTNAMISS+V VTNLPRK+VVKWFEDKR EDGVP  RLP
Sbjct: 267  QKRLKKVHVETLERVYKRTKRPTNAMISSIVQVTNLPRKKVVKWFEDKRNEDGVPEQRLP 326

Query: 993  YQPSTSESM 1019
            YQ S  E++
Sbjct: 327  YQRSAPEAV 335


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