BLASTX nr result

ID: Coptis23_contig00007188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007188
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269363.1| PREDICTED: uncharacterized protein LOC100255...   330   3e-88
emb|CBI37976.3| unnamed protein product [Vitis vinifera]              318   2e-84
ref|XP_002305468.1| predicted protein [Populus trichocarpa] gi|2...   317   3e-84
ref|XP_002313753.1| predicted protein [Populus trichocarpa] gi|2...   303   4e-80
ref|XP_003540948.1| PREDICTED: uncharacterized protein LOC780560...   301   2e-79

>ref|XP_002269363.1| PREDICTED: uncharacterized protein LOC100255631 [Vitis vinifera]
          Length = 589

 Score =  330 bits (847), Expect = 3e-88
 Identities = 189/278 (67%), Positives = 205/278 (73%), Gaps = 4/278 (1%)
 Frame = +3

Query: 27   SKNREDLDSRSSGTKTIGTDXXXXXXXXXXXXIGSSMK---LTSLTEKREGNKRSAGGDI 197
            ++NREDLDSR+SGTKT G D             G+SM+    +S  EKREG KRSAGGDI
Sbjct: 288  TENREDLDSRASGTKTNGGDSSDNEAESSVNESGNSMQKLGTSSSAEKREGVKRSAGGDI 347

Query: 198  APTTRHCRSVSMDSFMGGLPNFGAESPKLPPSPGTRSGQHSHSNSMDGTSTAFSLDFGNG 377
            APTTRH RSVSMDSFMG + NFG ESPKL PSPGTR GQ S SNSMDG S  FSL+FGNG
Sbjct: 348  APTTRHYRSVSMDSFMGKM-NFGDESPKLLPSPGTRPGQLSPSNSMDGNSATFSLEFGNG 406

Query: 378  EFNGAELKKIMANEKLAEIALADPKRAKRILANRQSAARSKERKMRYISELEHKVXXXXX 557
            EF+GAELKKIMANEKLAEIAL DPKRAKRILANRQSAARSKERKMRYISELEHKV     
Sbjct: 407  EFSGAELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQT 466

Query: 558  XXXXXXXXXXXXXRDSSGLTSQNHELKFRLQAMEQQAHLRDALNEALTAEVQRLKLATAQ 737
                         RDS+GLTSQN+ELKFRLQAMEQQA LRDALNEALTAEVQRLKLATA+
Sbjct: 467  EATTLSAQLTLLQRDSAGLTSQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATAE 526

Query: 738  LGGEVHNSS-FAQQLSMNPXXXXXXXXXTNKLNMFQLK 848
            LGGE   S     QLS+NP           +LN+ QL+
Sbjct: 527  LGGESQASKCLVPQLSVNPQMFHLHHQQPTQLNIHQLQ 564


>emb|CBI37976.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  318 bits (814), Expect = 2e-84
 Identities = 183/275 (66%), Positives = 196/275 (71%), Gaps = 1/275 (0%)
 Frame = +3

Query: 27  SKNREDLDSRSSGTKTIGTDXXXXXXXXXXXXIGSSMKLTSLTEKREGNKRSAGGDIAPT 206
           ++NREDLDSR+SGTKT G D                         REG KRSAGGDIAPT
Sbjct: 87  TENREDLDSRASGTKTNGGDSSD----------------NEAESSREGVKRSAGGDIAPT 130

Query: 207 TRHCRSVSMDSFMGGLPNFGAESPKLPPSPGTRSGQHSHSNSMDGTSTAFSLDFGNGEFN 386
           TRH RSVSMDSFMG + NFG ESPKL PSPGTR GQ S SNSMDG S  FSL+FGNGEF+
Sbjct: 131 TRHYRSVSMDSFMGKM-NFGDESPKLLPSPGTRPGQLSPSNSMDGNSATFSLEFGNGEFS 189

Query: 387 GAELKKIMANEKLAEIALADPKRAKRILANRQSAARSKERKMRYISELEHKVXXXXXXXX 566
           GAELKKIMANEKLAEIAL DPKRAKRILANRQSAARSKERKMRYISELEHKV        
Sbjct: 190 GAELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEAT 249

Query: 567 XXXXXXXXXXRDSSGLTSQNHELKFRLQAMEQQAHLRDALNEALTAEVQRLKLATAQLGG 746
                     RDS+GLTSQN+ELKFRLQAMEQQA LRDALNEALTAEVQRLKLATA+LGG
Sbjct: 250 TLSAQLTLLQRDSAGLTSQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATAELGG 309

Query: 747 EVHNSS-FAQQLSMNPXXXXXXXXXTNKLNMFQLK 848
           E   S     QLS+NP           +LN+ QL+
Sbjct: 310 ESQASKCLVPQLSVNPQMFHLHHQQPTQLNIHQLQ 344


>ref|XP_002305468.1| predicted protein [Populus trichocarpa] gi|222848432|gb|EEE85979.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  317 bits (812), Expect = 3e-84
 Identities = 181/260 (69%), Positives = 199/260 (76%), Gaps = 5/260 (1%)
 Frame = +3

Query: 27  SKNREDLDSRSSGTKTIGTDXXXXXXXXXXXXIGSSMK---LTSLTEKREGNKRSAGGDI 197
           ++NREDLDSR+SGTKT G D             G ++    L+S TEKREG KRSAGGDI
Sbjct: 189 NENREDLDSRASGTKTNGGDSSDNEAESSVNESGGNLPRAGLSSSTEKREGIKRSAGGDI 248

Query: 198 APTTRHCRSVSMDSFMGGLPNFGAESPKLPPSPGTRSGQHSHSNSMDGTSTAFSLDFGNG 377
           APTTRH RSVSMDSFMG L NFG ESPKLPPSPGTR GQ S ++S+DG   AFSLDFGNG
Sbjct: 249 APTTRHYRSVSMDSFMGKL-NFGNESPKLPPSPGTRPGQLSPTDSIDGN--AFSLDFGNG 305

Query: 378 EFNGAELKKIMANEKLAEIALADPKRAKRILANRQSAARSKERKMRYISELEHKVXXXXX 557
           EF+GAELKKIMANEKLAEIALADPKRAKRILANRQSAARSKERKMRYISELEHKV     
Sbjct: 306 EFSGAELKKIMANEKLAEIALADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQT 365

Query: 558 XXXXXXXXXXXXXRDSSGLTSQNHELKFRLQAMEQQAHLRDALNEALTAEVQRLKLATAQ 737
                        RDS GLT+QN+ELKFR+QAMEQQA LRDALNEALTAEV+RLK+ATA+
Sbjct: 366 EATTLSAQLTLLQRDSVGLTNQNNELKFRIQAMEQQAQLRDALNEALTAEVRRLKIATAE 425

Query: 738 LGG--EVHNSSFAQQLSMNP 791
            GG  +   S   QQLS+NP
Sbjct: 426 QGGDSDPSKSMVQQQLSINP 445


>ref|XP_002313753.1| predicted protein [Populus trichocarpa] gi|222850161|gb|EEE87708.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  303 bits (777), Expect = 4e-80
 Identities = 177/260 (68%), Positives = 193/260 (74%), Gaps = 5/260 (1%)
 Frame = +3

Query: 27  SKNREDLDSRSSGTKTIGTDXXXXXXXXXXXXIGSSMK---LTSLTEKREGNKRSAGGDI 197
           ++NREDLDSR+SGTKT G D             G S+     +S TEKREG KRSAGGDI
Sbjct: 20  NENREDLDSRASGTKTNGGDSSDNEAESSVNESGGSVPRGGFSSSTEKREGIKRSAGGDI 79

Query: 198 APTTRHCRSVSMDSFMGGLPNFGAESPKLPPSPGTRSGQHSHSNSMDGTSTAFSLDFGNG 377
           APT+RH RSVSMDSFMG L NFG ESPKLPPSPGTR GQ S +NSMDG   AFSL+FGNG
Sbjct: 80  APTSRHYRSVSMDSFMGKL-NFGDESPKLPPSPGTRPGQLSPTNSMDGN--AFSLEFGNG 136

Query: 378 EFNGAELKKIMANEKLAEIALADPKRAKRILANRQSAARSKERKMRYISELEHKVXXXXX 557
           EF+GAELKKIMANEKLAEIA  DPKRAKRILANRQSAARSKERKMRYISELEHKV     
Sbjct: 137 EFSGAELKKIMANEKLAEIASTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQT 196

Query: 558 XXXXXXXXXXXXXRDSSGLTSQNHELKFRLQAMEQQAHLRDALNEALTAEVQRLKLATAQ 737
                        RDS GLTSQN+ELKFRLQAMEQQA LRD +NEAL  EV+RLK+ATA+
Sbjct: 197 EATTLSAQLTLLQRDSVGLTSQNNELKFRLQAMEQQAQLRD-VNEALNGEVRRLKIATAE 255

Query: 738 LGGEVHNSS--FAQQLSMNP 791
            GG+   S     QQLS+NP
Sbjct: 256 QGGDSDPSKGLVQQQLSVNP 275


>ref|XP_003540948.1| PREDICTED: uncharacterized protein LOC780560 [Glycine max]
          Length = 538

 Score =  301 bits (772), Expect = 2e-79
 Identities = 170/255 (66%), Positives = 185/255 (72%), Gaps = 1/255 (0%)
 Frame = +3

Query: 30   KNREDLDSRSSGTKTIGTDXXXXXXXXXXXXIGSSMKLTSLTEKREGNKRSAGGDIAPTT 209
            +NR+DLDSR+SGTKT G D             G         EKREG KRSAGG+IAPTT
Sbjct: 245  ENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDGGVRQGGNEKREGMKRSAGGEIAPTT 304

Query: 210  RHCRSVSMDSFMGGLPNFGAESPKLPPSPGTRSGQHSHSNSMDGTSTAFSLDFGNGEFNG 389
            RH RSVSMDSF+G L NF  ESPKLPPSPG RS   S +  +DG S AFSL+FGNGEF+G
Sbjct: 305  RHYRSVSMDSFIGKL-NFDEESPKLPPSPGQRSALMSPAGGIDGNSAAFSLEFGNGEFSG 363

Query: 390  AELKKIMANEKLAEIALADPKRAKRILANRQSAARSKERKMRYISELEHKVXXXXXXXXX 569
             ELKKIMANEKLAEIAL DPKRAKRILANRQSAARSKERKMRYISELEHKV         
Sbjct: 364  PELKKIMANEKLAEIALIDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATT 423

Query: 570  XXXXXXXXXRDSSGLTSQNHELKFRLQAMEQQAHLRDALNEALTAEVQRLKLATAQLGGE 749
                     RDS+GLT+QN ELKFRLQ+MEQQA LRDALNEALTAEVQRLKLATA+L G+
Sbjct: 424  LSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELSGD 483

Query: 750  VHNSS-FAQQLSMNP 791
             H S     Q S+NP
Sbjct: 484  SHGSGCLIPQHSVNP 498


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