BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007183
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   220   2e-66
ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communi...   197   8e-58
ref|XP_003520572.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   192   2e-56
ref|XP_003553467.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   186   4e-54
ref|NP_563675.1| transducin/WD-40 repeat-containing protein [Ara...   184   9e-54

>ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
           [Vitis vinifera] gi|296085216|emb|CBI28711.3| unnamed
           protein product [Vitis vinifera]
          Length = 433

 Score =  220 bits (560), Expect(2) = 2e-66
 Identities = 117/200 (58%), Positives = 148/200 (74%), Gaps = 1/200 (0%)
 Frame = +1

Query: 283 TSGFLLDTCEVGMEAGLLESDDKEETLCPAISDICASPDGSLIAVAIQSLHGVVLLSCNL 462
           TSG LLDTCEVG +AG LES+ + E    A+ D+C +PDG+L+A AIQSL G++LL+CN+
Sbjct: 236 TSGSLLDTCEVGSQAGFLESNGRGEEHYSAVIDLCTTPDGTLVAAAIQSLQGIMLLNCNI 295

Query: 463 SGRTLSITKVVSM-GGTFIPTSLAMSSSAERLWIVTGASNLPALDSPSFARVSVISGLKK 639
           S ++LSI KVVS+ GG+FIPTSL  +S AE LW+VTG S L  LDS S ARV VISG + 
Sbjct: 296 SAKSLSIAKVVSITGGSFIPTSLGTASCAEFLWMVTGVSTLHGLDSHSLARVRVISGFRI 355

Query: 640 HGSDSSDDKPVVLDDNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXXVKIAMRNLLIKRQ 819
              DS + +P +L+D+EIPGG KLLEKLQGSVSI             VK+AM NLLIK+Q
Sbjct: 356 SSPDSVEHEPTMLEDDEIPGGEKLLEKLQGSVSIEN--KVFSAAAEAVKMAMCNLLIKKQ 413

Query: 820 YSVEKRELRKKSRNDRKLKQ 879
           YS +KRE RK++RND+K+KQ
Sbjct: 414 YSADKREFRKRTRNDKKIKQ 433



 Score = 59.7 bits (143), Expect(2) = 2e-66
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = +3

Query: 147 FVTCLSFVCTQEYPQGFLLSGSGDSTVRLWD 239
           FV+CL+FVC  +YP+GFL+SGSGDSTVRLWD
Sbjct: 204 FVSCLAFVCAPDYPEGFLVSGSGDSTVRLWD 234


>ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communis]
           gi|223535946|gb|EEF37605.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 435

 Score =  197 bits (501), Expect(2) = 8e-58
 Identities = 110/200 (55%), Positives = 137/200 (68%), Gaps = 1/200 (0%)
 Frame = +1

Query: 283 TSGFLLDTCEVGMEAGLLESDDKEETLCPAISDICASPDGSLIAVAIQSLHGVVLLSCNL 462
           T+G LLDTCEVG + G L+S   +E  C A++D+C  P+ +L+AVAIQSL G++LLSC+L
Sbjct: 239 TAGRLLDTCEVGAKTGCLDSSKNDED-CSAVTDLCTIPNDNLVAVAIQSLQGIMLLSCDL 297

Query: 463 SGRTLSITKVVS-MGGTFIPTSLAMSSSAERLWIVTGASNLPALDSPSFARVSVISGLKK 639
             ++L + KVV  MG  FIPTSL  SSSAE +W+VTG S L   D  S ARV V+SG  K
Sbjct: 298 DSQSLHVIKVVFVMGENFIPTSLGSSSSAELIWMVTGVSKLQGSDHNSLARVRVLSGFTK 357

Query: 640 HGSDSSDDKPVVLDDNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXXVKIAMRNLLIKRQ 819
              DS+D +  VL DNE+PG  KLLEKLQGSV I +           VK AM NLLIK+Q
Sbjct: 358 SIPDSTDGELHVLGDNEVPGAEKLLEKLQGSVFIDE--KVFQAAAEAVKTAMCNLLIKKQ 415

Query: 820 YSVEKRELRKKSRNDRKLKQ 879
           Y+ EKRE RK+ RNDRK+KQ
Sbjct: 416 YTTEKREFRKRGRNDRKVKQ 435



 Score = 53.9 bits (128), Expect(2) = 8e-58
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +3

Query: 147 FVTCLSFVCTQEYPQGFLLSGSGDSTVRLWD 239
           FV+CL+F+   +YPQG L+SGSGDSTVRLWD
Sbjct: 207 FVSCLAFIWAADYPQGLLVSGSGDSTVRLWD 237


>ref|XP_003520572.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
           [Glycine max]
          Length = 419

 Score =  192 bits (487), Expect(2) = 2e-56
 Identities = 110/198 (55%), Positives = 132/198 (66%), Gaps = 1/198 (0%)
 Frame = +1

Query: 286 SGFLLDTCEVGMEAGLLESDDKEETLCPAISDICASPDGSLIAVAIQSLHGVVLLSCNLS 465
           SG LLDTCEV ++AGLLES+ K E    A++D+C   DG L+AVAIQSL G+VLLSCN+S
Sbjct: 229 SGALLDTCEVAIKAGLLESNGKAEERGHAVTDLCTVLDGLLVAVAIQSLQGIVLLSCNVS 288

Query: 466 GRTLSITKVVSMGG-TFIPTSLAMSSSAERLWIVTGASNLPALDSPSFARVSVISGLKKH 642
            +TLS+ KVVS+ G  F+PT L  S S  +LW+VTG S LP  + PS A V VIS +   
Sbjct: 289 AQTLSVAKVVSVAGEAFVPTCLGSSPSIGKLWMVTGVSGLPGFNYPSLACVRVISSI--- 345

Query: 643 GSDSSDDKPVVLDDNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXXVKIAMRNLLIKRQY 822
                + +PVVL D+ IPGG KLLE LQGS S+             VK AM NLLIK+QY
Sbjct: 346 ---DVEKEPVVLGDDNIPGGEKLLETLQGSASVDDN--AFLAAAEAVKTAMCNLLIKKQY 400

Query: 823 SVEKRELRKKSRNDRKLK 876
             E RE RKKSRNDRKLK
Sbjct: 401 PSENREYRKKSRNDRKLK 418



 Score = 55.1 bits (131), Expect(2) = 2e-56
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +3

Query: 147 FVTCLSFVCTQEYPQGFLLSGSGDSTVRLWD 239
           FV+CL+F+  QE PQGFLLSGSGDSTVRLW+
Sbjct: 196 FVSCLAFIQAQECPQGFLLSGSGDSTVRLWN 226


>ref|XP_003553467.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
           [Glycine max]
          Length = 417

 Score =  186 bits (472), Expect(2) = 4e-54
 Identities = 108/198 (54%), Positives = 129/198 (65%), Gaps = 1/198 (0%)
 Frame = +1

Query: 286 SGFLLDTCEVGMEAGLLESDDKEETLCPAISDICASPDGSLIAVAIQSLHGVVLLSCNLS 465
           SG LLDTCEV ++AGLLES+ K E    A+ D+C   DG ++AVAIQSL G+VLLSCN+ 
Sbjct: 227 SGALLDTCEVAIKAGLLESNGKAEEHGHAVIDLCTVLDGLIVAVAIQSLQGIVLLSCNVC 286

Query: 466 GRTLSITKVVSMGG-TFIPTSLAMSSSAERLWIVTGASNLPALDSPSFARVSVISGLKKH 642
            +TLS  KVVS+ G  F+PT L  S S  +LW+VTG S LP  +  S ARV VISG+   
Sbjct: 287 AQTLSFAKVVSVAGEAFVPTCLGSSPSIRKLWMVTGVSGLPGCNYLSLARVRVISGI--- 343

Query: 643 GSDSSDDKPVVLDDNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXXVKIAMRNLLIKRQY 822
                + +PVV  D+ IPGG KLLE LQGS S+             VK AM NLLIK+QY
Sbjct: 344 ---DVEQEPVVPGDDNIPGGEKLLETLQGSASVDDS--AFLATAEAVKTAMCNLLIKKQY 398

Query: 823 SVEKRELRKKSRNDRKLK 876
             E RE RKKSRNDRKLK
Sbjct: 399 PSENREYRKKSRNDRKLK 416



 Score = 52.8 bits (125), Expect(2) = 4e-54
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +3

Query: 147 FVTCLSFVCTQEYPQGFLLSGSGDSTVRLWD 239
           FV+CL+F+  QE PQG LLSGSGDSTVRLW+
Sbjct: 194 FVSCLAFIQAQECPQGLLLSGSGDSTVRLWN 224


>ref|NP_563675.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|13877931|gb|AAK44043.1|AF370228_1 unknown protein
           [Arabidopsis thaliana] gi|16323464|gb|AAL15226.1|
           unknown protein [Arabidopsis thaliana]
           gi|332189411|gb|AEE27532.1| transducin/WD-40
           repeat-containing protein [Arabidopsis thaliana]
          Length = 427

 Score =  184 bits (468), Expect(2) = 9e-54
 Identities = 102/197 (51%), Positives = 136/197 (69%), Gaps = 1/197 (0%)
 Frame = +1

Query: 283 TSGFLLDTCEVGMEAGLLESDDKEETLCPAISDICASPDGSLIAVAIQSLHGVVLLSCNL 462
           TSG LLDTCEV   AG  ES++ E      ++DICA P+ SL AVAIQS  G+ LLSC+L
Sbjct: 237 TSGSLLDTCEVSTVAGHAESNENESPTQVTVTDICAIPNSSLAAVAIQSFQGIFLLSCDL 296

Query: 463 SGRTLSITKVVSM-GGTFIPTSLAMSSSAERLWIVTGASNLPALDSPSFARVSVISGLKK 639
           +  TLSITKV+ + G +FIPTS+A+S+S+  LW+V+GASNLP  + P F+RV VIS L+ 
Sbjct: 297 TAHTLSITKVIKIPGESFIPTSIAVSASSRLLWMVSGASNLPGSNHPGFSRVRVISCLET 356

Query: 640 HGSDSSDDKPVVLDDNEIPGGSKLLEKLQGSVSISKGXXXXXXXXXXVKIAMRNLLIKRQ 819
             S        +L+D +IPGG+KLLE+LQG V+I +           V+ AM +LL+K+Q
Sbjct: 357 ESSS-------ILEDEQIPGGTKLLEQLQGKVTIEES--VMSAAAEAVRAAMSSLLMKKQ 407

Query: 820 YSVEKRELRKKSRNDRK 870
           YS EKRE RK++RND+K
Sbjct: 408 YSEEKREFRKRTRNDKK 424



 Score = 53.1 bits (126), Expect(2) = 9e-54
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = +3

Query: 138 YGRFVTCLSFVCTQEYPQGFLLSGSGDSTVRLWD 239
           +  F+TC +FV T E  QG+L+SGSGDSTVRLWD
Sbjct: 202 HSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWD 235