BLASTX nr result

ID: Coptis23_contig00007177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007177
         (1745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30694.3| unnamed protein product [Vitis vinifera]              234   5e-59
ref|XP_003524206.1| PREDICTED: uncharacterized protein LOC100808...   220   8e-55
ref|XP_003532757.1| PREDICTED: uncharacterized protein LOC100787...   210   8e-52
ref|XP_003629774.1| Myb family transcription factor APL [Medicag...   194   5e-47
emb|CBI21992.3| unnamed protein product [Vitis vinifera]              189   2e-45

>emb|CBI30694.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  234 bits (597), Expect = 5e-59
 Identities = 169/439 (38%), Positives = 226/439 (51%), Gaps = 19/439 (4%)
 Frame = -2

Query: 1384 FDLNEDASSQDDESTTE-EIDPTFEAADTTMTSGNNDNAGGIER---SSTIRQYVRSKMP 1217
            FDLNE+++S +D++  E E+    +  +   +S NN+N    E+    +++RQYVRSKMP
Sbjct: 25   FDLNEESNSPEDDAAAEAEVSMEDDEGEREGSSANNNNVSAGEKRRGKNSVRQYVRSKMP 84

Query: 1216 RLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDCG 1037
            RLRWTPDLHLSFVHAVERLGGQ RATPKLVL+LMNV+GLSIAHVKSHLQMYRSK+LD+ G
Sbjct: 85   RLRWTPDLHLSFVHAVERLGGQARATPKLVLELMNVKGLSIAHVKSHLQMYRSKRLDESG 144

Query: 1036 QVLSHSAIPMQG-------CPSMFYHGSSPHGHFS-ERRDPFPGNNVYESNRPRRTLQYP 881
            QVL  +   M G        P + +  +    HFS E+       N  E +R    L+  
Sbjct: 145  QVLCKTYRRMGGRDRDRDCSPGILFRPTGSCRHFSMEKSGMEQAWNPGECSRSYNLLRCT 204

Query: 880  IYLEPYDTRGGFSRQQEWPLTQ---GSMIKPISLHGKDL--GLNEPIRPSRFLEQKRWPP 716
            +  + YD R   SR+Q++  +Q      +   +L  K      N P RPSRFLE+K+WPP
Sbjct: 205  LSQQQYDFRANSSRRQQYASSQYYNALRLSTSALQSKQYFGQGNGPTRPSRFLEEKKWPP 264

Query: 715  RDLIDNHHAKNQRFSTNVIWTGGSSQNLPHINWATP--VSNDVIYNTKKDSWWNTSTNMK 542
            R+LI N   +  R       T  +SQ+L H    TP  V   + Y +KK S W+ +   +
Sbjct: 265  RELIGNPWREKTR-------TNAASQSLVHQICTTPRCVGATLTY-SKKPSEWSPANEER 316

Query: 541  SRQLQSNSSDPILISDNVEPEYETPFRLESRKMTTHQPKDTLEELRKIKGNLSLENPFFK 362
              Q QS+   P  IS    P+ E PFRLES            +E R             K
Sbjct: 317  LGQFQSHLHYPKTISSISTPQIEPPFRLESN-----------QEKR------------LK 353

Query: 361  EKECVPNLQLSLRHDQGNESEDKATGGTNNIXXXXXXXXXXXXXXXRQDAQPNEQIQDIS 182
            E+E +P+LQL L     NE +       +                 RQ  QP E+ ++ +
Sbjct: 354  EEEWLPDLQLRLSQRSANEEDTH-----HKSKYEMNTMLSLSPYSSRQQEQPTEKQKEET 408

Query: 181  QHKRWTLQAGCCNATLRLS 125
            Q   W  Q     A L LS
Sbjct: 409  QTNAWPSQTTTGKADLSLS 427


>ref|XP_003524206.1| PREDICTED: uncharacterized protein LOC100808625 [Glycine max]
          Length = 401

 Score =  220 bits (561), Expect = 8e-55
 Identities = 156/420 (37%), Positives = 211/420 (50%), Gaps = 27/420 (6%)
 Frame = -2

Query: 1486 DMADRVEISDKEESIGSDXXXXXXXXXXXXKLSCFDLNEDASSQDDESTTEE-IDPTFEA 1310
            D  +R E +D + S+GS               S FDLNE+ASS+D+    ++  +   E 
Sbjct: 3    DEYERSEHADDDSSMGSSQKC-----------SSFDLNEEASSKDNNDNDDKGFEEAREE 51

Query: 1309 ADTTMTSGNNDNAGGIERSSTIRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKL 1130
              +T  S +    G  ER   +RQYVRSKMPRLRWTP+LHLSFVHAVERLGGQERATPKL
Sbjct: 52   GTSTNKSSSMTKEGSNERRGGVRQYVRSKMPRLRWTPELHLSFVHAVERLGGQERATPKL 111

Query: 1129 VLQLMNVRGLSIAHVKSHLQMYRSKKLDDCGQVLSH---SAIPMQGCPSMFYHGSSPHGH 959
            VLQLMNVRGLSIAHVKSHLQMYRSKKLD+ GQVL     S   +     + +   +P  H
Sbjct: 112  VLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLGQTYKSTHELGRISHVAHQSMNPRQH 171

Query: 958  FSERRDPFPGNNVYESNRPRRTLQYPIYLEPYDTRGGFSRQQEWPL-------------- 821
            F          + Y  +     L +P  L    T+    R+Q+W                
Sbjct: 172  FKMGNGGIILASDYNDHSYFHGLMHPCSLSHSHTKAIDLRRQQWYFNNHQPFRRPSYFSN 231

Query: 820  ---------TQGSMIKPISLHGKDLGLNEPIRPSRFLEQKRWPPRDLIDNHHAKNQRFST 668
                     TQG  +    ++  D     P+RPS+FLE+K+WPP D+++NHH K +R   
Sbjct: 232  EVVSSTALQTQGRSLSSNQINLMDATSIAPMRPSQFLEEKKWPPLDIMNNHHWK-KRLPA 290

Query: 667  NVIWTGGSSQNLPHINWATPVSNDVIYNTKKDSWWNTSTNMKSRQLQSNSSDPILISDNV 488
            N I +   SQ + H    T  S        + S  N   N + ++  SNS +    S++ 
Sbjct: 291  N-ITSNAVSQPVVHQFGTTAAS------LLRPSELNFGNNTRIKEHLSNSDEHRNYSNSF 343

Query: 487  EPEYETPFRLESRKMTTHQPKDTLEELRKIKGNLSLENPFFKEKECVPNLQLSLRHDQGN 308
            + E+E PFR++S +          E+L+             KE +  P+L+LSL    GN
Sbjct: 344  KLEFEPPFRIKSNQ----------EKLQ-------------KENQWAPDLRLSLSQRDGN 380


>ref|XP_003532757.1| PREDICTED: uncharacterized protein LOC100787138 [Glycine max]
          Length = 384

 Score =  210 bits (535), Expect = 8e-52
 Identities = 148/388 (38%), Positives = 195/388 (50%), Gaps = 27/388 (6%)
 Frame = -2

Query: 1390 SCFDLNEDASSQDDESTTEEIDPTFEAAD---TTMTSGNNDNAGGIERSSTIRQYVRSKM 1220
            S FDLNE+ASS+D+    E  D   EA D   +T  S +    G  ER   +RQYVRSKM
Sbjct: 25   SSFDLNEEASSEDNNDNDEGYDE--EAKDEGTSTNKSSSITKEGSNERRGGVRQYVRSKM 82

Query: 1219 PRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDC 1040
            PRLRWTP+LHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLD+ 
Sbjct: 83   PRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEA 142

Query: 1039 GQVLSHSAIPMQGCPSMFYHGSSPHGHFSERRDPFPGNNVYESNRPRRTLQYPIYLEPYD 860
            GQ                +   +P  HF          + Y        L +P  L P  
Sbjct: 143  GQA---------------HQSMNPRQHFKMGNGGIILASDYNDRSYFHGLMHPSSLSPSQ 187

Query: 859  TRGGFSRQQEWPL-----------------------TQGSMIKPISLHGKDLGLNEPIRP 749
            ++   SR Q+W                         TQG  +    ++  D     P++P
Sbjct: 188  SKAIDSRHQQWYFNSHQPYRRPSYFSNEVVSSTTLQTQGRSMSSNQINLMDATSIAPMKP 247

Query: 748  SRFLEQKRWPPRDLIDNHHAKNQRFSTNVIWTGGSSQNLPHINWATPVSNDVIYNTKKDS 569
            S+FLE+K+WPP D+++NHH K +R   N+    GS   +      +P        + + S
Sbjct: 248  SQFLEEKKWPPLDIMNNHHWK-KRLPANISSNSGSQPVVHQFGTTSP--------SLRPS 298

Query: 568  WWNTSTNMK-SRQLQSNSSDPILISDNVEPEYETPFRLESRKMTTHQPKDTLEELRKIKG 392
              N   N + S +  SNS +    S++++ E E  FR++S +          E+L+    
Sbjct: 299  ELNFGNNTRISWEHLSNSDEHRNYSNSLKLELEPLFRIKSNQ----------EKLQ---- 344

Query: 391  NLSLENPFFKEKECVPNLQLSLRHDQGN 308
                     KEK+  P+L+LSL    GN
Sbjct: 345  ---------KEKQWAPDLRLSLSQRDGN 363


>ref|XP_003629774.1| Myb family transcription factor APL [Medicago truncatula]
            gi|355523796|gb|AET04250.1| Myb family transcription
            factor APL [Medicago truncatula]
          Length = 426

 Score =  194 bits (494), Expect = 5e-47
 Identities = 155/427 (36%), Positives = 210/427 (49%), Gaps = 60/427 (14%)
 Frame = -2

Query: 1384 FDLNEDASSQDDESTTEEIDPTFEAADTTMTSGNNDN-------------------AGGI 1262
            FDLNE+AS  D +   EE D   EA D  + +  +D+                   +G  
Sbjct: 38   FDLNEEASRSDQDVNNEEND---EACDHELVNNGDDDDEKLAKDDDEGSSSSTKRSSGSN 94

Query: 1261 ERSST-IRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHV 1085
            ER    +RQYVRSKMPRLRWTPDLH SF+HAVERLGGQERATPKLVLQLMNVRGLSIAHV
Sbjct: 95   ERRRNGVRQYVRSKMPRLRWTPDLHHSFMHAVERLGGQERATPKLVLQLMNVRGLSIAHV 154

Query: 1084 KSHLQMYRSKKLDDCGQVLSHSAIPMQGCPSMFYH----GSSPHGHFSERRDPFPGNNVY 917
            KSHLQMYRSKKLD+ GQVLS +        S+ +H       PH HF        G  V 
Sbjct: 155  KSHLQMYRSKKLDEAGQVLSPTHRSTHELGSISHHVAHQSMIPHQHFKMAN----GGIVL 210

Query: 916  ESNRPRRTLQYPIYLEPYDTRGGF---------SRQQEWPLTQGS---------MIKP-- 797
            E+N  + +  +   L P                SR QEW L   S         ++ P  
Sbjct: 211  ETNYNQHSYNFHSLLHPSSLSHSHSHSHSKPINSRHQEWYLNHQSWRPSYMSNELVMPST 270

Query: 796  -ISLHGK-DLGLNE--------------PIRPSRFLEQKRWPPRDLIDNHHAKNQRFSTN 665
             ++  G+  + LN+              P+RPS+FLE+KRWPP D+++NH          
Sbjct: 271  TLNTQGRSSITLNQQLQVKDNTVTTTLAPMRPSQFLEEKRWPPLDIMNNH---------- 320

Query: 664  VIWTGGSSQNLPHINWATPVSNDVIYNTKKDSWWNTSTNMKSRQLQSNSSDPILISDNVE 485
              W     +NL H +++   S+       + S+ N   N +SR+  SN ++     ++ +
Sbjct: 321  PYW----KKNL-HDHFS---SDRTSLRPAEVSFGN---NTRSRENISNINNDHNYFNSSK 369

Query: 484  PEYETPFRLESRKMTTHQPKDTLEELRKIKGNLSLENPFFKEKECVPNLQLSLRHDQGNE 305
             E++ PFR++  + T                         K+K+ VP+LQLSL    GN 
Sbjct: 370  IEFDPPFRIKLNQET-----------------------LLKDKQWVPDLQLSLSQTNGN- 405

Query: 304  SEDKATG 284
            ++ K+ G
Sbjct: 406  NDGKSDG 412


>emb|CBI21992.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  189 bits (480), Expect = 2e-45
 Identities = 109/191 (57%), Positives = 128/191 (67%), Gaps = 8/191 (4%)
 Frame = -2

Query: 1483 MADRVEISDKEESIGSDXXXXXXXXXXXXKLSCFDLNEDASSQDDESTT----EEIDPTF 1316
            MA+R+EISD   S GS+                FDLN+ A  ++D STT     E+    
Sbjct: 1    MAERIEISDDNRSDGSEIQTKTSSLLCFPGHLSFDLNQKAMDEEDSSTTGVPENEVKEDE 60

Query: 1315 EAADTTMT-SGNNDNAGGIERSSTIRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERAT 1139
             + D   + S NN    G ER+ T+RQY+RSKMPRLRWTPDLHL+FV+AVERLGGQERAT
Sbjct: 61   TSTDANYSNSSNNTTVEGKERT-TVRQYIRSKMPRLRWTPDLHLAFVNAVERLGGQERAT 119

Query: 1138 PKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDCGQVLSHSAIPMQGCPSM--FYHGSSPH 965
            PKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDD GQVLSH++ PM     +   Y  +SP+
Sbjct: 120  PKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDSGQVLSHTSRPMYVRDHILEMYQRASPY 179

Query: 964  GHF-SERRDPF 935
            GHF  E R  F
Sbjct: 180  GHFRMENRSHF 190


Top