BLASTX nr result

ID: Coptis23_contig00007171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007171
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK16652.1| CDC2 homolog [Populus tremula x Populus tremuloides]    94   9e-18
ref|XP_002306004.1| hypothetical protein POPTRDRAFT_648419 [Popu...    94   9e-18
gb|ABK93808.1| unknown [Populus trichocarpa]                           94   9e-18
gb|ABM26975.1| cdc2 protein [Larix x marschlinsii]                     93   2e-17
emb|CAA54746.1| cdc2Pa [Picea abies] gi|116778762|gb|ABK20983.1|...    93   2e-17

>gb|AAK16652.1| CDC2 homolog [Populus tremula x Populus tremuloides]
          Length = 294

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   KSAFPKWPSKDLTTVVPDLEPAGLDLLSKMLYLDPCKRITARSALEHEYFK 155
           KSAFPKWPSKDL TVVP LE AG+DLLSKML+LDP KRITARSALEHEYFK
Sbjct: 238 KSAFPKWPSKDLATVVPTLEKAGVDLLSKMLFLDPTKRITARSALEHEYFK 288


>ref|XP_002306004.1| hypothetical protein POPTRDRAFT_648419 [Populus trichocarpa]
           gi|222848968|gb|EEE86515.1| hypothetical protein
           POPTRDRAFT_648419 [Populus trichocarpa]
          Length = 294

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   KSAFPKWPSKDLTTVVPDLEPAGLDLLSKMLYLDPCKRITARSALEHEYFK 155
           KSAFPKWPSKDL TVVP LE AG+DLLSKML+LDP KRITARSALEHEYFK
Sbjct: 238 KSAFPKWPSKDLATVVPTLEKAGVDLLSKMLFLDPTKRITARSALEHEYFK 288


>gb|ABK93808.1| unknown [Populus trichocarpa]
          Length = 294

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   KSAFPKWPSKDLTTVVPDLEPAGLDLLSKMLYLDPCKRITARSALEHEYFK 155
           KSAFPKWPSKDL TVVP LE AG+DLLSKML+LDP KRITARSALEHEYFK
Sbjct: 238 KSAFPKWPSKDLATVVPTLEKAGVDLLSKMLFLDPTKRITARSALEHEYFK 288


>gb|ABM26975.1| cdc2 protein [Larix x marschlinsii]
          Length = 206

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   KSAFPKWPSKDLTTVVPDLEPAGLDLLSKMLYLDPCKRITARSALEHEYFK 155
           KSAFPKWP+KDL TVVP LEPAG+DLLSKML L+P KRITARSALEHEYFK
Sbjct: 154 KSAFPKWPAKDLATVVPGLEPAGIDLLSKMLCLEPSKRITARSALEHEYFK 204


>emb|CAA54746.1| cdc2Pa [Picea abies] gi|116778762|gb|ABK20983.1| unknown [Picea
           sitchensis]
          Length = 294

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   KSAFPKWPSKDLTTVVPDLEPAGLDLLSKMLYLDPCKRITARSALEHEYFK 155
           KSAFPKWP+KDL TVVP LEPAG+DLLSKML L+P KRITARSALEHEYFK
Sbjct: 238 KSAFPKWPAKDLATVVPGLEPAGIDLLSKMLCLEPSKRITARSALEHEYFK 288


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