BLASTX nr result

ID: Coptis23_contig00007155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007155
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589724.1| Isochorismatase [Medicago truncatula] gi|355...   306   4e-81
ref|XP_002272282.1| PREDICTED: isochorismatase-like isoform 1 [V...   301   1e-79
ref|XP_002331086.1| predicted protein [Populus trichocarpa] gi|2...   298   7e-79
ref|XP_002530911.1| Isochorismatase, putative [Ricinus communis]...   296   3e-78
ref|XP_003534679.1| PREDICTED: isochorismatase-like [Glycine max]     288   1e-75

>ref|XP_003589724.1| Isochorismatase [Medicago truncatula] gi|355478772|gb|AES59975.1|
           Isochorismatase [Medicago truncatula]
          Length = 203

 Score =  306 bits (783), Expect = 4e-81
 Identities = 144/196 (73%), Positives = 172/196 (87%)
 Frame = +3

Query: 54  SSPSSYKKFEIRNKTPNPKTSVLLVIDMQNYFSSMANPIIPNLNTTITLCRKANIPVIFT 233
           SS SSY+K+E+R + PNP+T  LLVIDMQNYFSSMA+PI+ NLNTTITLCR+A+IPVIFT
Sbjct: 8   SSSSSYEKYEVRKRNPNPQTCALLVIDMQNYFSSMASPILANLNTTITLCRRASIPVIFT 67

Query: 234 RHSHKSPSDYGMLDEWWNNDLVIDGTIDAELINSMGRLKDDKVVEKNTYSAFRGTGLEEY 413
           RH HKSPSD+GML+EWW  D+++DG+I+AEL+ ++ R  +D VVEK+TYSAFR TGLEE 
Sbjct: 68  RHCHKSPSDHGMLEEWWFGDIIMDGSIEAELMTALDRSGEDMVVEKSTYSAFRNTGLEEK 127

Query: 414 LKEKGVEEVIVTGVMTNLCCETSAREALIRGFRVFFSTDATATSSMELHEATLKNMAYGF 593
           LKE GV+EVIVTGVMTNLCCET+AREA IRGFRVFFSTDATATS ++LHEATLKNMAYGF
Sbjct: 128 LKEMGVDEVIVTGVMTNLCCETTAREAFIRGFRVFFSTDATATSDLDLHEATLKNMAYGF 187

Query: 594 AYLVDCKRLEEGFTGK 641
           AY +DC RL+   TG+
Sbjct: 188 AYFLDCHRLKHALTGE 203


>ref|XP_002272282.1| PREDICTED: isochorismatase-like isoform 1 [Vitis vinifera]
           gi|359484032|ref|XP_003633056.1| PREDICTED:
           isochorismatase-like isoform 2 [Vitis vinifera]
          Length = 198

 Score =  301 bits (770), Expect = 1e-79
 Identities = 141/191 (73%), Positives = 166/191 (86%)
 Frame = +3

Query: 66  SYKKFEIRNKTPNPKTSVLLVIDMQNYFSSMANPIIPNLNTTITLCRKANIPVIFTRHSH 245
           SYK+++IR + PNPK SVLLVIDMQNYFSS+A PIIP + TTI LCR+A+IPVIFTRHSH
Sbjct: 7   SYKEYDIRKRNPNPKNSVLLVIDMQNYFSSIAKPIIPAITTTIALCRRASIPVIFTRHSH 66

Query: 246 KSPSDYGMLDEWWNNDLVIDGTIDAELINSMGRLKDDKVVEKNTYSAFRGTGLEEYLKEK 425
           KSP+D+ ML EWW  DL++DGT +AEL++ +GR+  DKVVEK TYSAFRGT LEEYL E+
Sbjct: 67  KSPADHAMLGEWWGGDLILDGTTEAELMSEIGRMPTDKVVEKTTYSAFRGTRLEEYLAER 126

Query: 426 GVEEVIVTGVMTNLCCETSAREALIRGFRVFFSTDATATSSMELHEATLKNMAYGFAYLV 605
           GVEEVIV+GVMTNLCCET+AREA +RGFRVFFSTDATAT++ E+HEATL NMAYGFAYLV
Sbjct: 127 GVEEVIVSGVMTNLCCETTAREAFVRGFRVFFSTDATATATAEMHEATLMNMAYGFAYLV 186

Query: 606 DCKRLEEGFTG 638
           DC RL+ G  G
Sbjct: 187 DCDRLDTGLFG 197


>ref|XP_002331086.1| predicted protein [Populus trichocarpa] gi|222872814|gb|EEF09945.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  298 bits (764), Expect = 7e-79
 Identities = 142/199 (71%), Positives = 173/199 (86%), Gaps = 1/199 (0%)
 Frame = +3

Query: 48  ADSSPSSYKKFEIRNKTPNPKTSVLLVIDMQNYFSSMANPIIPNLNTTITLCRKANIPVI 227
           A ++ SSYKK+E R++ P+PKTS+LLVID+QNYFSSM NPI+P L TTI LCR+++IPV+
Sbjct: 3   AAAAASSYKKYETRSRNPDPKTSLLLVIDVQNYFSSMVNPILPQLLTTIDLCRRSSIPVL 62

Query: 228 FTRHSHKSPSDYGMLDEWWNNDLVIDGTIDAELINSMGRLK-DDKVVEKNTYSAFRGTGL 404
           FTRH+HKSP DYGML EWW+NDLV+DGT++AEL+  + RL   ++VVEKNTYSAF  TGL
Sbjct: 63  FTRHNHKSPPDYGMLGEWWDNDLVLDGTVEAELMPEIRRLAGQNEVVEKNTYSAFENTGL 122

Query: 405 EEYLKEKGVEEVIVTGVMTNLCCETSAREALIRGFRVFFSTDATATSSMELHEATLKNMA 584
           +E L E GV+EVIVTGVMTNLCCET+AREA ++GFRVFFSTDATATS +ELHEATLKN+A
Sbjct: 123 QERLVEMGVKEVIVTGVMTNLCCETTAREAFVKGFRVFFSTDATATSDLELHEATLKNLA 182

Query: 585 YGFAYLVDCKRLEEGFTGK 641
           YGFAYLVDC RL++G  GK
Sbjct: 183 YGFAYLVDCDRLQDGLLGK 201


>ref|XP_002530911.1| Isochorismatase, putative [Ricinus communis]
           gi|223529505|gb|EEF31460.1| Isochorismatase, putative
           [Ricinus communis]
          Length = 202

 Score =  296 bits (759), Expect = 3e-78
 Identities = 143/198 (72%), Positives = 166/198 (83%), Gaps = 3/198 (1%)
 Frame = +3

Query: 45  MADSSPSSYKKFEIRNKTPNPKTSVLLVIDMQNYFSSMANPIIPNLNTTITLCRKANIPV 224
           MA   PSSYKK+EIR + P+PK SVLLV+D QNYFSSM  PI+PNL  TI LCR+A+IPV
Sbjct: 1   MATRCPSSYKKYEIRRRDPDPKFSVLLVVDAQNYFSSMVKPILPNLLQTIDLCRRASIPV 60

Query: 225 IFTRHSHKSPSDYGMLDEWWNNDLVIDGTIDAELINSMGRL---KDDKVVEKNTYSAFRG 395
            FTRH HKSP+DYGML EWWNNDL+IDGT++++L+  + RL   KD +VVEKNTYSAF  
Sbjct: 61  FFTRHRHKSPADYGMLGEWWNNDLIIDGTVESQLVPEIKRLVLGKDHEVVEKNTYSAFTN 120

Query: 396 TGLEEYLKEKGVEEVIVTGVMTNLCCETSAREALIRGFRVFFSTDATATSSMELHEATLK 575
           T L E L E GVEEVIVTGVMTNLCCET+AR+A +RGFRVFFSTDATATS +ELHEATLK
Sbjct: 121 TRLHERLLEMGVEEVIVTGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLK 180

Query: 576 NMAYGFAYLVDCKRLEEG 629
           N+AYGFAY+VDC+RLE G
Sbjct: 181 NLAYGFAYMVDCQRLENG 198


>ref|XP_003534679.1| PREDICTED: isochorismatase-like [Glycine max]
          Length = 202

 Score =  288 bits (736), Expect = 1e-75
 Identities = 135/192 (70%), Positives = 163/192 (84%)
 Frame = +3

Query: 63  SSYKKFEIRNKTPNPKTSVLLVIDMQNYFSSMANPIIPNLNTTITLCRKANIPVIFTRHS 242
           +SY K+EIR + P PK+  LLVID+QN+FSSMA PI+ NLNTTI+LCR+A+IPVIFTRH 
Sbjct: 9   TSYTKYEIRKRNPEPKSCALLVIDVQNHFSSMATPILHNLNTTISLCRRASIPVIFTRHC 68

Query: 243 HKSPSDYGMLDEWWNNDLVIDGTIDAELINSMGRLKDDKVVEKNTYSAFRGTGLEEYLKE 422
           HKSPSD GML+EWW+ DL++DGT +AEL+ ++ R   D VVEK+TYSAFR TGLEE L E
Sbjct: 69  HKSPSDAGMLEEWWSGDLIVDGTAEAELLEALDRKSSDLVVEKSTYSAFRSTGLEEKLVE 128

Query: 423 KGVEEVIVTGVMTNLCCETSAREALIRGFRVFFSTDATATSSMELHEATLKNMAYGFAYL 602
            GV+EVIVTGVMTNLCCET++REA +RGFRVFFS DATATS +ELHEA LKN+AYGFAYL
Sbjct: 129 MGVKEVIVTGVMTNLCCETTSREAFVRGFRVFFSADATATSDVELHEAALKNLAYGFAYL 188

Query: 603 VDCKRLEEGFTG 638
           VDC+RL+   +G
Sbjct: 189 VDCQRLQHALSG 200


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