BLASTX nr result

ID: Coptis23_contig00007154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007154
         (1273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267313.1| PREDICTED: uncharacterized protein LOC100252...   290   5e-76
emb|CAN73547.1| hypothetical protein VITISV_038181 [Vitis vinifera]   284   3e-74
gb|ACF86628.1| unknown [Zea mays] gi|195634795|gb|ACG36866.1| BS...   269   1e-69
ref|XP_002514599.1| conserved hypothetical protein [Ricinus comm...   261   2e-67
ref|XP_004154940.1| PREDICTED: uncharacterized LOC101212458 [Cuc...   260   6e-67

>ref|XP_002267313.1| PREDICTED: uncharacterized protein LOC100252678 [Vitis vinifera]
          Length = 302

 Score =  290 bits (742), Expect = 5e-76
 Identities = 165/272 (60%), Positives = 200/272 (73%), Gaps = 25/272 (9%)
 Frame = -3

Query: 1262 MDFWARARNFAEETAKRSTEL--------------AKRSHEFTINGSSKISDIVSETAKK 1125
            MD W +AR+FAEE AKRS EL              AKRS E     + +  +I SETAK+
Sbjct: 1    MDLWLKARSFAEEAAKRSQELTIGTTKISDIVSETAKRSKEIASETAKRSKEIASETAKR 60

Query: 1124 SKE-------KADQIKIEALKRAEQIKSLAENISAPQIPLVDSSIPSDA-ELDMFGVTDD 969
            SKE       +ADQIKIEALK A++IK LA+ IS    P V SS  ++A +L+ FGVTD+
Sbjct: 61   SKEIAVEASKRADQIKIEALKGADKIKLLADGIS----PSVRSSPETEASDLEKFGVTDE 116

Query: 968  LREFVKGITHNTFQDFPIQDGPEISEIPTVSNVRQDLTEWQERHATLVLLTVKEISSLRY 789
            L EFVKGIT NTFQDFP++D  E+S++PTVSNVRQDLT+WQERHA LVL TVKE+S LRY
Sbjct: 117  LGEFVKGITMNTFQDFPLEDDTEMSDVPTVSNVRQDLTQWQERHANLVLSTVKEVSKLRY 176

Query: 788  QLCPRHMKERKFWKIYFILVNTHVAPYEKRYMGE-KLKSAEKEKDDELKENPPVGTSSKP 612
            +LCPR MKERKFW+IYFILVN+HVAPYEK+YM + K KSAE+EK+D +KE P  GT+ K 
Sbjct: 177  ELCPRFMKERKFWRIYFILVNSHVAPYEKQYMEDVKQKSAEEEKEDNVKEIPKAGTTVKV 236

Query: 611  ESTPTIR-PKTSTSSA-EQDLDVFLLGDLGSS 522
            E+  + +  +TSTSSA EQDLDVFLLGDLG S
Sbjct: 237  EAKESNKQSRTSTSSATEQDLDVFLLGDLGDS 268


>emb|CAN73547.1| hypothetical protein VITISV_038181 [Vitis vinifera]
          Length = 314

 Score =  284 bits (727), Expect = 3e-74
 Identities = 166/284 (58%), Positives = 201/284 (70%), Gaps = 37/284 (13%)
 Frame = -3

Query: 1262 MDFWARARNFAEETAKRSTEL--------------AKRSHEFTINGSSKISDIVSETAKK 1125
            MD W +AR+FAEE AKRS EL              AKRS E     + +  +I SETAK+
Sbjct: 1    MDLWLKARSFAEEAAKRSQELTIGTTKISDIVSETAKRSKEIASETAKRSKEIASETAKR 60

Query: 1124 SKE-------KADQIKIEALKRAEQIKSLAENISAPQIPLVDSSIPSDA-ELDMFGVTDD 969
            SKE       +ADQIKIEALK A++IK LA+ IS    P V SS  ++A +L+ FGVTD+
Sbjct: 61   SKEIAVEASKRADQIKIEALKGADKIKLLADGIS----PSVRSSPETEASDLEKFGVTDE 116

Query: 968  LREFVKGITHNTFQDFPIQDGPEISEIPTVSNVRQDLTEWQERHATLVLLTVKEISSLRY 789
            LREFVKGIT NTFQDFP++D  E+S++PTVSNVRQDLT+WQERHA LVL TVKE+S LRY
Sbjct: 117  LREFVKGITMNTFQDFPLEDDTEMSDVPTVSNVRQDLTQWQERHANLVLSTVKEVSKLRY 176

Query: 788  QLCPRHMKERKFWKIYFILVNTHVAP------------YEKRYMGE-KLKSAEKEKDDEL 648
            +LCPR MKERKFW+IYFILVN+HVAP            YEK+YM + K KSAE+EK+D +
Sbjct: 177  ELCPRFMKERKFWRIYFILVNSHVAPFSNRSYXMVSIRYEKQYMEDVKXKSAEEEKEDNV 236

Query: 647  KENPPVGTSSKPESTPTIR-PKTSTSSA-EQDLDVFLLGDLGSS 522
            KE P  GT+ K E+  + +  +TSTSSA EQDLDVFLLGDLG S
Sbjct: 237  KEIPKAGTTVKVEAKESNKQSRTSTSSATEQDLDVFLLGDLGDS 280


>gb|ACF86628.1| unknown [Zea mays] gi|195634795|gb|ACG36866.1| BSD domain containing
            protein [Zea mays] gi|413923791|gb|AFW63723.1| BSD domain
            containing protein [Zea mays]
          Length = 300

 Score =  269 bits (688), Expect = 1e-69
 Identities = 142/259 (54%), Positives = 179/259 (69%), Gaps = 13/259 (5%)
 Frame = -3

Query: 1262 MDFWARARNFAEETAKRSTEL----AKRSHEFTINGSSKISDIVSETAKKSKEKADQIKI 1095
            MD W RAR FA E AKRS EL    AKRS       + K  +I SETA KS+E A +   
Sbjct: 1    MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATK 60

Query: 1094 EALKRAEQIKSLAENISAPQIPLVD---------SSIPSDAELDMFGVTDDLREFVKGIT 942
            +A   A QIK LA ++  P IP +          SS+P  AEL+ +G+TDDLREFVKG+T
Sbjct: 61   QADLLAGQIKHLASDLPVPSIPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMT 120

Query: 941  HNTFQDFPIQDGPEISEIPTVSNVRQDLTEWQERHATLVLLTVKEISSLRYQLCPRHMKE 762
             NTF+DFP+QD PE+S++PTVSNVRQDL EWQ RH TLVL  VKEIS  RY+LCPR+MKE
Sbjct: 121  INTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVLSAVKEISKFRYELCPRYMKE 180

Query: 761  RKFWKIYFILVNTHVAPYEKRYMGEKLKSAEKEKDDELKENPPVGTSSKPESTPTIRPKT 582
            RKFW++YF+LVN+++AP+EK+Y  E    AE+EK D  KE     T+++P+ T  +  KT
Sbjct: 181  RKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDT-KVPSKT 239

Query: 581  STSSAEQDLDVFLLGDLGS 525
            S+++ E DLDVFLLGDLGS
Sbjct: 240  SSTNPEHDLDVFLLGDLGS 258


>ref|XP_002514599.1| conserved hypothetical protein [Ricinus communis]
            gi|223546203|gb|EEF47705.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 312

 Score =  261 bits (668), Expect = 2e-67
 Identities = 155/284 (54%), Positives = 186/284 (65%), Gaps = 42/284 (14%)
 Frame = -3

Query: 1262 MDFWARARNFAEETAKRSTEL----AKRSHEFTINGSSKISDIVSETAKKSKEKA----- 1110
            MDFW +AR+FAEE AKRS EL    AKRS E TI GSSK+SDIVSETAK+SKE A     
Sbjct: 1    MDFWQKARSFAEEAAKRSQELTKEAAKRSQELTI-GSSKLSDIVSETAKRSKEIAAEASR 59

Query: 1109 --------------------------------DQIKIEALKRAEQIKSLAENISAPQIPL 1026
                                            +QIK +A+KRA+QIKSLA    +  +  
Sbjct: 60   RSQEIRITSSLKLSDIVSETAKRSKEIAAEASNQIKSQAIKRADQIKSLATTSGSGAVAS 119

Query: 1025 VDSSIPSDAELDMFGVTDDLREFVKGITHNTFQDFPIQDGPEISEIPTVSNVRQDLTEWQ 846
                   + EL+ FG+T++LREFVK IT  TFQDFP+QD  E+S++P VSNVRQDLTEWQ
Sbjct: 120  AVEP-QQEKELERFGITEELREFVKEITIATFQDFPLQDDSEMSDVPAVSNVRQDLTEWQ 178

Query: 845  ERHATLVLLTVKEISSLRYQLCPRHMKERKFWKIYFILVNTHVAPYEKRYMGEKLK-SAE 669
            E+HA LVL +VKEIS LRY+LCPR MKERKFW+IYFILVN HV PYEKRYM E  + S E
Sbjct: 179  EKHANLVLSSVKEISKLRYELCPRTMKERKFWRIYFILVNKHVDPYEKRYMEEAAQDSTE 238

Query: 668  KEKDDELKENPPVGTSSKPESTPTIRPKTSTSSAEQDLDVFLLG 537
            + KD E+++ P    +SKPE   + R   S +SAEQDLDVFLLG
Sbjct: 239  QVKDHEVEKLPEAMVTSKPEVKKSSR--QSKASAEQDLDVFLLG 280


>ref|XP_004154940.1| PREDICTED: uncharacterized LOC101212458 [Cucumis sativus]
          Length = 299

 Score =  260 bits (664), Expect = 6e-67
 Identities = 147/272 (54%), Positives = 188/272 (69%), Gaps = 25/272 (9%)
 Frame = -3

Query: 1262 MDFWARARNFAEETAKRSTEL----AKRSHEFTINGSSKISDIVSETAKKSKE------- 1116
            MDFW +AR+FAEE AKRS EL    A+RS E TI GSS++SDIVSETAK+SKE       
Sbjct: 1    MDFWNKARSFAEEAAKRSQELTLEAARRSQELTI-GSSRLSDIVSETAKRSKEFATEASK 59

Query: 1115 KADQIKIEALKRAEQIKSLAENISAPQIPLVDSSIPSDAE--LDMFGVTDDLREFVKGIT 942
            +ADQIK EA+KRA+ IK L E      +   ++S     E  L  FG+ ++LR+FVKGIT
Sbjct: 60   RADQIKAEAVKRADLIKHLVERTPPSGVLEKNASDEETREENLQRFGINEELRDFVKGIT 119

Query: 941  HNTFQDFPIQDGPEISEIPTVSNVRQDLTEWQERHATLVLLTVKEISSLRYQLCPRHMKE 762
             +TF+DFP++D  E+S +PTVSN+ QDLTEWQ +HA+LVLLTVKEIS LRY+LCPR MKE
Sbjct: 120  MSTFRDFPLEDDSEMSNVPTVSNISQDLTEWQAKHASLVLLTVKEISKLRYELCPRIMKE 179

Query: 761  RKFWKIYFILVNTHVAPYEKRYMGEKLKSAEKEKDDELKENPPVGTSS---------KPE 609
            RKFW+IYF+LVN H+ PYEK+YM   +  ++K  +D + E      +S         K E
Sbjct: 180  RKFWRIYFLLVNRHITPYEKKYMEGVMLKSDKPVEDGMMEPIEAEITSASTGMMEPVKAE 239

Query: 608  STPTIRPK---TSTSSAEQDLDVFLLGDLGSS 522
             T T + K    ++SS++QDLDVFLLGDLG S
Sbjct: 240  ITSTSQEKKTAPNSSSSDQDLDVFLLGDLGDS 271


Top