BLASTX nr result

ID: Coptis23_contig00007144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007144
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space...   148   5e-34
ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|1...   142   2e-32
ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space...   135   5e-30
ref|XP_002513150.1| Intermembrane space import and assembly prot...   133   1e-29
ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space...   132   4e-29

>ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40 [Vitis vinifera] gi|147853097|emb|CAN78563.1|
           hypothetical protein VITISV_010402 [Vitis vinifera]
           gi|297742718|emb|CBI35352.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  148 bits (373), Expect = 5e-34
 Identities = 78/131 (59%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = -3

Query: 391 IGQVQIDQTIKAESSLSKAQQPHSMEDLIAEATAFGDSETESLDAKIEKALECPCVAPLR 212
           +GQV+ +Q+    +S S+     S++ LIAEA AFGD E ESLDAK +KALECPC+A LR
Sbjct: 1   MGQVESNQSSAPNNSQSRPSD--SLDALIAEAAAFGDDENESLDAKAQKALECPCIAHLR 58

Query: 211 SGPCGTPFIDAFRCFLKSTAEEKGSDCVHPFVALQNCIKLNPDAF-XXXXXXXXXXXXXX 35
           SGPCGT F +AF CFLKS+AEEKGSDCVHPFVALQNCIK NP+AF               
Sbjct: 59  SGPCGTQFSEAFVCFLKSSAEEKGSDCVHPFVALQNCIKANPNAFSKDILDDDDEVKKEE 118

Query: 34  XKTGEYKISPP 2
             T EYKI PP
Sbjct: 119 EPTQEYKIIPP 129


>ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|118481972|gb|ABK92917.1|
           unknown [Populus trichocarpa]
           gi|222865469|gb|EEF02600.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  142 bits (359), Expect = 2e-32
 Identities = 71/128 (55%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
 Frame = -3

Query: 370 QTIKAESSLSKAQQPH-----SMEDLIAEATAFGDSETESLDAKIEKALECPCVAPLRSG 206
           Q+  A S  +   +PH     SME L+AEA A+G+ E ESL+AK +KALECPC+A LR+G
Sbjct: 5   QSEVAPSDTADQMEPHFSSSPSMESLLAEAVAYGNDENESLEAKAQKALECPCIADLRNG 64

Query: 205 PCGTPFIDAFRCFLKSTAEEKGSDCVHPFVALQNCIKLNPDAFXXXXXXXXXXXXXXXKT 26
           PCG  F ++F CFLKST+EEKGSDCVHPFVALQNCIK NP+AF                 
Sbjct: 65  PCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKANPNAFSKDILEEAEEKKEEEPA 124

Query: 25  GEYKISPP 2
            EYKI PP
Sbjct: 125 QEYKIIPP 132


>ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/91 (70%), Positives = 70/91 (76%)
 Frame = -3

Query: 349 SLSKAQQPHSMEDLIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRC 170
           S S    P SME LIAEA A+G+   ESLDAK  +ALECPC+A LR GPCG  F DAF C
Sbjct: 23  SASPVSGPPSMESLIAEAEAYGNETNESLDAKANRALECPCIADLRKGPCGIQFSDAFLC 82

Query: 169 FLKSTAEEKGSDCVHPFVALQNCIKLNPDAF 77
           F KSTAEEKGSDCVHPFVALQ+CIK NP+AF
Sbjct: 83  FFKSTAEEKGSDCVHPFVALQSCIKANPNAF 113


>ref|XP_002513150.1| Intermembrane space import and assembly protein 40, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223548161|gb|EEF49653.1| Intermembrane space import
           and assembly protein 40, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 135

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/105 (60%), Positives = 78/105 (74%)
 Frame = -3

Query: 391 IGQVQIDQTIKAESSLSKAQQPHSMEDLIAEATAFGDSETESLDAKIEKALECPCVAPLR 212
           +GQ Q +     ++   ++    S+E LIAEA A+G+ E ESLDAK +KALECPC+A LR
Sbjct: 1   MGQAQSEVAAVDQTQNHQSSPATSVESLIAEAAAYGNDENESLDAKAQKALECPCIADLR 60

Query: 211 SGPCGTPFIDAFRCFLKSTAEEKGSDCVHPFVALQNCIKLNPDAF 77
            G CG  F +AF CFLKSTAEEKGSDCVHPFVALQ+C+K NP+AF
Sbjct: 61  KGSCGIQFSEAFVCFLKSTAEEKGSDCVHPFVALQDCLKANPEAF 105


>ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/91 (69%), Positives = 69/91 (75%)
 Frame = -3

Query: 349 SLSKAQQPHSMEDLIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRC 170
           S S    P SME LIAEA A+G+   ESLDAK  +ALECPC+A LR G CG  F DAF C
Sbjct: 23  SASPVSGPPSMESLIAEAEAYGNETNESLDAKANRALECPCIADLRKGSCGIQFSDAFLC 82

Query: 169 FLKSTAEEKGSDCVHPFVALQNCIKLNPDAF 77
           F KSTAEEKGSDCVHPFVALQ+CIK NP+AF
Sbjct: 83  FFKSTAEEKGSDCVHPFVALQSCIKANPNAF 113


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