BLASTX nr result

ID: Coptis23_contig00007143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007143
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    61   4e-07
ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    61   4e-07
ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicag...    61   4e-07
ref|XP_003618163.1| DEAD-box ATP-dependent RNA helicase [Medicag...    60   5e-07
ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   8e-07

>ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
           [Glycine max] gi|356565649|ref|XP_003551051.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like
           isoform 2 [Glycine max]
          Length = 706

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 98  VLKAVDKAGYKTPSPIQMAAIPLGLPQRDVIG 3
           +LKAV+KAGYKTPSPIQMAAIPLGL QRDVIG
Sbjct: 297 LLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIG 328


>ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Glycine
           max]
          Length = 701

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 98  VLKAVDKAGYKTPSPIQMAAIPLGLPQRDVIG 3
           +LKAV+KAGYKTPSPIQMAAIPLGL QRDVIG
Sbjct: 292 LLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIG 323


>ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355503536|gb|AES84739.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 781

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -3

Query: 98  VLKAVDKAGYKTPSPIQMAAIPLGLPQRDVIG 3
           +LKAV+KAGYKTPSPIQMAAIPLGL QRDVIG
Sbjct: 297 LLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIG 328


>ref|XP_003618163.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355493178|gb|AES74381.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 666

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 98  VLKAVDKAGYKTPSPIQMAAIPLGLPQRDVIG 3
           +LKAV+KAGYKTPSPIQMA+IPLGL QRDVIG
Sbjct: 259 ILKAVEKAGYKTPSPIQMASIPLGLQQRDVIG 290


>ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 712

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 98  VLKAVDKAGYKTPSPIQMAAIPLGLPQRDVIG 3
           +LKAV++AGYKTPSPIQMAAIPLGL QRDVIG
Sbjct: 303 LLKAVERAGYKTPSPIQMAAIPLGLQQRDVIG 334


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