BLASTX nr result
ID: Coptis23_contig00007138
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00007138
(289 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565338.1| RNA helicase, ATP-dependent, SK12/DOB1 protein ... 69 2e-23
gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana] 69 2e-23
ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. ly... 70 4e-23
gb|AEB38217.1| HEN2 [Helianthus annuus] gi|328693213|gb|AEB38218... 66 1e-21
gb|AEB38192.1| HEN2 [Helianthus paradoxus] gi|328693163|gb|AEB38... 66 1e-21
>ref|NP_565338.1| RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis
thaliana] gi|20197305|gb|AAC67203.2| expressed protein
[Arabidopsis thaliana] gi|28973761|gb|AAO64196.1|
putative DEAD/DEAH box RNA helicase (HUA ENHANCER2)
[Arabidopsis thaliana] gi|330250934|gb|AEC06028.1| RNA
helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis
thaliana]
Length = 995
Score = 68.9 bits (167), Expect(2) = 2e-23
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = -2
Query: 288 VPVQLPLICALSNCRVSVPSDLRPVEAWQSILLAVQ*LASGFPNGFQSL 142
VPVQLPLI ALS R+SVPSDLRPVEA QSILLA+Q L+S FP GF L
Sbjct: 682 VPVQLPLISALSRLRISVPSDLRPVEARQSILLALQELSSRFPLGFPKL 730
Score = 64.7 bits (156), Expect(2) = 2e-23
Identities = 27/45 (60%), Positives = 38/45 (84%)
Frame = -1
Query: 154 FPKLNPVKDMGIEDPELVELVNQIEELEKELFAHPLHTSSQDTEV 20
FPKL+PVKDM I+D E+V+LV+QIEE+E++L AHP+H S D ++
Sbjct: 727 FPKLHPVKDMNIQDTEIVDLVSQIEEVEQKLLAHPMHKSEDDQQI 771
>gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana]
Length = 991
Score = 68.9 bits (167), Expect(2) = 2e-23
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = -2
Query: 288 VPVQLPLICALSNCRVSVPSDLRPVEAWQSILLAVQ*LASGFPNGFQSL 142
VPVQLPLI ALS R+SVPSDLRPVEA QSILLA+Q L+S FP GF L
Sbjct: 678 VPVQLPLISALSRLRISVPSDLRPVEARQSILLALQELSSRFPLGFPKL 726
Score = 64.7 bits (156), Expect(2) = 2e-23
Identities = 27/45 (60%), Positives = 38/45 (84%)
Frame = -1
Query: 154 FPKLNPVKDMGIEDPELVELVNQIEELEKELFAHPLHTSSQDTEV 20
FPKL+PVKDM I+D E+V+LV+QIEE+E++L AHP+H S D ++
Sbjct: 723 FPKLHPVKDMNIQDTEIVDLVSQIEEVEQKLLAHPMHKSEDDQQI 767
>ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. lyrata]
gi|297329585|gb|EFH60004.1| HUA enhancer 2 [Arabidopsis
lyrata subsp. lyrata]
Length = 984
Score = 70.1 bits (170), Expect(2) = 4e-23
Identities = 38/49 (77%), Positives = 40/49 (81%)
Frame = -2
Query: 288 VPVQLPLICALSNCRVSVPSDLRPVEAWQSILLAVQ*LASGFPNGFQSL 142
VPVQLPLI ALS R+SVPSDLRPVEA QSILLAVQ L+S FP GF L
Sbjct: 671 VPVQLPLISALSRLRISVPSDLRPVEARQSILLAVQELSSRFPLGFPKL 719
Score = 62.8 bits (151), Expect(2) = 4e-23
Identities = 26/45 (57%), Positives = 37/45 (82%)
Frame = -1
Query: 154 FPKLNPVKDMGIEDPELVELVNQIEELEKELFAHPLHTSSQDTEV 20
FPKL+PVKDM I+D E+V+LV+ IEE+E++L AHP+H S D ++
Sbjct: 716 FPKLHPVKDMNIQDTEIVDLVSHIEEVEQKLLAHPMHKSQDDQQI 760
>gb|AEB38217.1| HEN2 [Helianthus annuus] gi|328693213|gb|AEB38218.1| HEN2
[Helianthus annuus] gi|328693215|gb|AEB38219.1| HEN2
[Helianthus annuus] gi|328693217|gb|AEB38220.1| HEN2
[Helianthus annuus] gi|328693219|gb|AEB38221.1| HEN2
[Helianthus annuus] gi|328693221|gb|AEB38222.1| HEN2
[Helianthus annuus] gi|328693227|gb|AEB38225.1| HEN2
[Helianthus annuus] gi|328693229|gb|AEB38226.1| HEN2
[Helianthus annuus]
Length = 128
Score = 66.2 bits (160), Expect(2) = 1e-21
Identities = 28/44 (63%), Positives = 38/44 (86%)
Frame = -1
Query: 151 PKLNPVKDMGIEDPELVELVNQIEELEKELFAHPLHTSSQDTEV 20
PKLNPVKDMGIE+PE V+LVNQIE+LE++L +HPL+ S + ++
Sbjct: 47 PKLNPVKDMGIEEPEFVDLVNQIEKLEQQLLSHPLNKSQDENQI 90
Score = 61.6 bits (148), Expect(2) = 1e-21
Identities = 31/49 (63%), Positives = 37/49 (75%)
Frame = -2
Query: 288 VPVQLPLICALSNCRVSVPSDLRPVEAWQSILLAVQ*LASGFPNGFQSL 142
VPVQLPLI ALS R+++P+DLRP+EA Q+ILLAVQ L FP G L
Sbjct: 1 VPVQLPLISALSKLRITIPTDLRPLEARQNILLAVQELEKRFPQGLPKL 49
>gb|AEB38192.1| HEN2 [Helianthus paradoxus] gi|328693163|gb|AEB38193.1| HEN2
[Helianthus paradoxus] gi|328693173|gb|AEB38198.1| HEN2
[Helianthus paradoxus] gi|328693175|gb|AEB38199.1| HEN2
[Helianthus paradoxus] gi|328693177|gb|AEB38200.1| HEN2
[Helianthus paradoxus] gi|328693179|gb|AEB38201.1| HEN2
[Helianthus paradoxus] gi|328693183|gb|AEB38203.1| HEN2
[Helianthus exilis] gi|328693187|gb|AEB38205.1| HEN2
[Helianthus argophyllus] gi|328693189|gb|AEB38206.1|
HEN2 [Helianthus argophyllus]
gi|328693191|gb|AEB38207.1| HEN2 [Helianthus annuus]
gi|328693193|gb|AEB38208.1| HEN2 [Helianthus annuus]
gi|328693195|gb|AEB38209.1| HEN2 [Helianthus annuus]
gi|328693197|gb|AEB38210.1| HEN2 [Helianthus annuus]
gi|328693199|gb|AEB38211.1| HEN2 [Helianthus annuus]
gi|328693201|gb|AEB38212.1| HEN2 [Helianthus annuus]
gi|328693203|gb|AEB38213.1| HEN2 [Helianthus annuus]
gi|328693205|gb|AEB38214.1| HEN2 [Helianthus annuus]
gi|328693207|gb|AEB38215.1| HEN2 [Helianthus annuus]
gi|328693209|gb|AEB38216.1| HEN2 [Helianthus annuus]
gi|328693223|gb|AEB38223.1| HEN2 [Helianthus annuus]
gi|328693225|gb|AEB38224.1| HEN2 [Helianthus annuus]
Length = 126
Score = 66.2 bits (160), Expect(2) = 1e-21
Identities = 28/44 (63%), Positives = 38/44 (86%)
Frame = -1
Query: 151 PKLNPVKDMGIEDPELVELVNQIEELEKELFAHPLHTSSQDTEV 20
PKLNPVKDMGIE+PE V+LVNQIE+LE++L +HPL+ S + ++
Sbjct: 47 PKLNPVKDMGIEEPEFVDLVNQIEKLEQQLLSHPLNKSQDENQI 90
Score = 61.6 bits (148), Expect(2) = 1e-21
Identities = 31/49 (63%), Positives = 37/49 (75%)
Frame = -2
Query: 288 VPVQLPLICALSNCRVSVPSDLRPVEAWQSILLAVQ*LASGFPNGFQSL 142
VPVQLPLI ALS R+++P+DLRP+EA Q+ILLAVQ L FP G L
Sbjct: 1 VPVQLPLISALSKLRITIPTDLRPLEARQNILLAVQELEKRFPQGLPKL 49