BLASTX nr result

ID: Coptis23_contig00007132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007132
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondri...   399   e-109
emb|CBI34574.3| unnamed protein product [Vitis vinifera]              399   e-109
ref|XP_002304577.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103
ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis] gi...   379   e-103
ref|XP_002877665.1| predicted protein [Arabidopsis lyrata subsp....   377   e-102

>ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Vitis
           vinifera]
          Length = 361

 Score =  399 bits (1026), Expect = e-109
 Identities = 189/229 (82%), Positives = 214/229 (93%)
 Frame = -2

Query: 689 LDAVLDVGGVYDESKDRYDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQ 510
           LDAVLDVGGVYD S+DRYDHHQKGF EVFGHGF TKLSSAGLVYKH+GMEIIAKEL+LDQ
Sbjct: 82  LDAVLDVGGVYDPSRDRYDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGMEIIAKELQLDQ 141

Query: 509 GHPDVHRLFLAVYKSFVEAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDN 330
           GHPDV RLFLAVYKSF+EA+DA DNGIN+YDTD P RYV+NT L SRVG+LNLDWMD D 
Sbjct: 142 GHPDVLRLFLAVYKSFMEAVDAVDNGINQYDTDQPLRYVNNTHLSSRVGKLNLDWMDPDQ 201

Query: 329 SAEKENEAFHRAMSLAGSEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKF 150
           S+EKENEAF RAM+L+GSEF++NVRF+A+SWLPARSIV++CLAAR D+D SGEIM L++F
Sbjct: 202 SSEKENEAFERAMNLSGSEFLDNVRFHAKSWLPARSIVMECLAARMDIDPSGEIMVLNRF 261

Query: 149 CPWKLHIYELEEEMKIDPPIKYVLYEDDRSKNWRVQAVAVSPDKFESRK 3
           CPWKLH++ELEEEMKIDPPIKYVLY+DDRSK+WRVQAVAV+PDKFESRK
Sbjct: 262 CPWKLHLFELEEEMKIDPPIKYVLYQDDRSKHWRVQAVAVAPDKFESRK 310



 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 39/67 (58%), Positives = 49/67 (73%)
 Frame = -3

Query: 1027 RSLSQGLIFFHKPTLLLLPLMATSQITHSSFNTTTSSPKRVGTHNGTFHCDEALGCYLIR 848
            R  ++ L FF  P  L LPLMA S++  S+F+T     KRVGTHNG+FHCDEALGC++IR
Sbjct: 6    RGFTEKLFFF--PRYLTLPLMAHSRV--SAFSTAPGL-KRVGTHNGSFHCDEALGCFMIR 60

Query: 847  LTDKFNN 827
            LTDKF +
Sbjct: 61   LTDKFRD 67


>emb|CBI34574.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  399 bits (1026), Expect = e-109
 Identities = 189/229 (82%), Positives = 214/229 (93%)
 Frame = -2

Query: 689 LDAVLDVGGVYDESKDRYDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQ 510
           LDAVLDVGGVYD S+DRYDHHQKGF EVFGHGF TKLSSAGLVYKH+GMEIIAKEL+LDQ
Sbjct: 59  LDAVLDVGGVYDPSRDRYDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGMEIIAKELQLDQ 118

Query: 509 GHPDVHRLFLAVYKSFVEAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDN 330
           GHPDV RLFLAVYKSF+EA+DA DNGIN+YDTD P RYV+NT L SRVG+LNLDWMD D 
Sbjct: 119 GHPDVLRLFLAVYKSFMEAVDAVDNGINQYDTDQPLRYVNNTHLSSRVGKLNLDWMDPDQ 178

Query: 329 SAEKENEAFHRAMSLAGSEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKF 150
           S+EKENEAF RAM+L+GSEF++NVRF+A+SWLPARSIV++CLAAR D+D SGEIM L++F
Sbjct: 179 SSEKENEAFERAMNLSGSEFLDNVRFHAKSWLPARSIVMECLAARMDIDPSGEIMVLNRF 238

Query: 149 CPWKLHIYELEEEMKIDPPIKYVLYEDDRSKNWRVQAVAVSPDKFESRK 3
           CPWKLH++ELEEEMKIDPPIKYVLY+DDRSK+WRVQAVAV+PDKFESRK
Sbjct: 239 CPWKLHLFELEEEMKIDPPIKYVLYQDDRSKHWRVQAVAVAPDKFESRK 287



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 27/44 (61%), Positives = 36/44 (81%), Gaps = 2/44 (4%)
 Frame = -3

Query: 952 ITHSSFNTTTSSP--KRVGTHNGTFHCDEALGCYLIRLTDKFNN 827
           + HS  +  +++P  KRVGTHNG+FHCDEALGC++IRLTDKF +
Sbjct: 1   MAHSRVSAFSTAPGLKRVGTHNGSFHCDEALGCFMIRLTDKFRD 44


>ref|XP_002304577.1| predicted protein [Populus trichocarpa] gi|222842009|gb|EEE79556.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  381 bits (978), Expect = e-103
 Identities = 181/231 (78%), Positives = 205/231 (88%)
 Frame = -2

Query: 695 ETLDAVLDVGGVYDESKDRYDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKL 516
           E LDAVLDVGGVYD S+DRYDHHQKGF EVFGHGF TKLSSAGLVYKH+G EIIAKEL++
Sbjct: 64  EGLDAVLDVGGVYDPSRDRYDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGKEIIAKELQV 123

Query: 515 DQGHPDVHRLFLAVYKSFVEAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDL 336
           D+GHPDVHRLFLAVYKSF+EAIDA DNGIN+YDTD P +YV+NT L SRVG+ NLDW D 
Sbjct: 124 DEGHPDVHRLFLAVYKSFMEAIDAIDNGINQYDTDQPPKYVNNTHLSSRVGKFNLDWTDP 183

Query: 335 DNSAEKENEAFHRAMSLAGSEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLH 156
           D S++KENEAF RAM+LAGSEF++NVRF+A+SWLPARSIV++CLA R DVD SGEIM L 
Sbjct: 184 DQSSKKENEAFERAMALAGSEFLDNVRFHAKSWLPARSIVMECLATRFDVDPSGEIMVLK 243

Query: 155 KFCPWKLHIYELEEEMKIDPPIKYVLYEDDRSKNWRVQAVAVSPDKFESRK 3
            FCPWKLH++ELE E+KIDP +KYVLY+DDRSK WRVQAVA SPD FESRK
Sbjct: 244 TFCPWKLHLFELEGELKIDPLVKYVLYQDDRSKQWRVQAVAKSPDSFESRK 294


>ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis]
           gi|223541884|gb|EEF43430.1| Protein MYG1, putative
           [Ricinus communis]
          Length = 373

 Score =  379 bits (972), Expect = e-103
 Identities = 177/231 (76%), Positives = 208/231 (90%)
 Frame = -2

Query: 695 ETLDAVLDVGGVYDESKDRYDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKL 516
           E+LDAVLDVGGVYD   DRYDHHQKGFEEVFGHGF TKLSSAGLVYKH+G EIIAKEL+L
Sbjct: 92  ESLDAVLDVGGVYDPVHDRYDHHQKGFEEVFGHGFTTKLSSAGLVYKHFGKEIIAKELQL 151

Query: 515 DQGHPDVHRLFLAVYKSFVEAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDL 336
           D+GHP+VHRLFLA+YKSF+EAIDA DNGIN+YDTD P RYV+NT L SRVGRLNLDW++ 
Sbjct: 152 DEGHPNVHRLFLAIYKSFMEAIDAVDNGINQYDTDKPPRYVNNTHLSSRVGRLNLDWIEP 211

Query: 335 DNSAEKENEAFHRAMSLAGSEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLH 156
           D S EKENE F RAM+LAGSEF++++ ++A+SWLPARSIV++CL AR DVD SGEIM L 
Sbjct: 212 DQSPEKENEVFQRAMTLAGSEFLDSLHYHAKSWLPARSIVMECLEARSDVDPSGEIMVLA 271

Query: 155 KFCPWKLHIYELEEEMKIDPPIKYVLYEDDRSKNWRVQAVAVSPDKFESRK 3
            FCPWKLH++E+EEE+KI+P IKYVLY+DDRSK+WRVQAVAV+PD+FESR+
Sbjct: 272 TFCPWKLHLFEIEEELKIEPSIKYVLYQDDRSKHWRVQAVAVAPDRFESRR 322



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 6/57 (10%)
 Frame = -3

Query: 979 LLPLMAT------SQITHSSFNTTTSSPKRVGTHNGTFHCDEALGCYLIRLTDKFNN 827
           L+PLMA+      S   +S+ +   + PKRVGTHNG+FHCDEALGC++IRLT+KF+N
Sbjct: 23  LIPLMASPPYPNVSSPAYSTGSPCHAPPKRVGTHNGSFHCDEALGCFMIRLTNKFSN 79


>ref|XP_002877665.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323503|gb|EFH53924.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 355

 Score =  377 bits (968), Expect = e-102
 Identities = 177/231 (76%), Positives = 206/231 (89%)
 Frame = -2

Query: 695 ETLDAVLDVGGVYDESKDRYDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKL 516
           E LDA LDVGGVYD   +RYDHHQKGF EVFG GF TKLSSAGLVYKHYG+EII+KEL+L
Sbjct: 73  EKLDAALDVGGVYDPQSERYDHHQKGFSEVFGLGFNTKLSSAGLVYKHYGLEIISKELQL 132

Query: 515 DQGHPDVHRLFLAVYKSFVEAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDL 336
           DQ HPDV RLFLAVYK+F+EA+DA DNGI++YDTD P RYV+NT L  R+GRLNLDW++ 
Sbjct: 133 DQRHPDVFRLFLAVYKNFIEAVDAIDNGIHQYDTDQPPRYVNNTSLGHRIGRLNLDWIEP 192

Query: 335 DNSAEKENEAFHRAMSLAGSEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLH 156
           D S+EKE+EAFHRAM LAGSEF+E V F+A+SWLPARSIV++CLA R D+D+SGEIMKL 
Sbjct: 193 DQSSEKEDEAFHRAMELAGSEFLECVHFHAKSWLPARSIVMECLAKRYDIDSSGEIMKLS 252

Query: 155 KFCPWKLHIYELEEEMKIDPPIKYVLYEDDRSKNWRVQAVAVSPDKFESRK 3
           K CPWKLHI+ELEEEMKIDPPIKYVLY+DDRS+NWR+QAV+VSP++FESRK
Sbjct: 253 KQCPWKLHIFELEEEMKIDPPIKYVLYQDDRSENWRIQAVSVSPERFESRK 303


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