BLASTX nr result

ID: Coptis23_contig00007130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007130
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283575.1| PREDICTED: myb-related protein 306 isoform 1...   445   e-122
ref|XP_002284926.1| PREDICTED: myb-related protein 306 [Vitis vi...   439   e-121
gb|ABK59040.1| R2R3 Myb30 transcription factor [Vitis vinifera]       438   e-120
emb|CBI22219.3| unnamed protein product [Vitis vinifera]              425   e-116
gb|ADL36762.1| MYB domain class transcription factor [Malus x do...   422   e-116

>ref|XP_002283575.1| PREDICTED: myb-related protein 306 isoform 1 [Vitis vinifera]
          Length = 327

 Score =  445 bits (1145), Expect = e-122
 Identities = 238/340 (70%), Positives = 267/340 (78%), Gaps = 5/340 (1%)
 Frame = -3

Query: 1269 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1090
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 60

Query: 1089 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 910
            LRPGIKRGNFTDHEE+MIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+KLQ
Sbjct: 61   LRPGIKRGNFTDHEERMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 909  TG--LDGQNRDGFSTFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKAS 736
            TG   DG +RD     Q+I++GQWERRLQTDIH AK+AL EALSL+ KP+SS    L  +
Sbjct: 121  TGSSSDGHSRDVSLASQSISRGQWERRLQTDIHMAKQALHEALSLE-KPHSSS-DQLNPT 178

Query: 735  NGYYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDS 556
            NGY + TR   P Q+ +YASSTENI+RLLEGWM N+PKQA  +S TTQ SF N  G TDS
Sbjct: 179  NGYQTCTR---PGQASSYASSTENIARLLEGWMRNSPKQARASSATTQNSFINTAG-TDS 234

Query: 555  SSREGTPSAENNNEIVSQGAFDSLF---ALNSSTPDVSPSMSLDDSTENSFFQDESKPNF 385
            +S EGTPSA NN +I    A++ LF   +L+SS  ++S S     S E SFFQ+ESKP+ 
Sbjct: 235  TSSEGTPSAANNEDIELTEAYEMLFGFDSLDSSNSEISQS----KSPEASFFQEESKPDL 290

Query: 384  ETPVPLSLLEKWLFEENILGQSHEDLMHEISSLDDSLNLF 265
               VPLS LEKWLFEE    Q  EDL     SLD+S + F
Sbjct: 291  SDQVPLSFLEKWLFEEG-GAQGKEDLTD--ISLDESPDFF 327


>ref|XP_002284926.1| PREDICTED: myb-related protein 306 [Vitis vinifera]
          Length = 307

 Score =  439 bits (1129), Expect = e-121
 Identities = 229/337 (67%), Positives = 255/337 (75%), Gaps = 2/337 (0%)
 Frame = -3

Query: 1269 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1090
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQEHGPGNWRAVPT+TGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTSTGLLRCSKSCRLRWTNY 60

Query: 1089 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 910
            LRPGIKRGNFTD EEK IIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+K  
Sbjct: 61   LRPGIKRGNFTDQEEKTIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFP 120

Query: 909  TGLDGQNRDGFSTFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKASNG 730
            TG+D  N+DGFS    I+KGQWERRLQTDIH AK+ALCEALS+D    SS L DLK+SNG
Sbjct: 121  TGVDDHNQDGFS----ISKGQWERRLQTDIHMAKQALCEALSID---TSSSLPDLKSSNG 173

Query: 729  YYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDSSS 550
            Y   TR   PVQ+ TYASS ENI++LLEGWM N+PK   TNSE TQ S N+  G T    
Sbjct: 174  YNPNTR---PVQASTYASSAENIAKLLEGWMRNSPKSTRTNSEATQNSKNSSEGAT---- 226

Query: 549  REGTPSAENNNEIVSQGAFDSLFALNSSTPDVSPS--MSLDDSTENSFFQDESKPNFETP 376
               TP            A DSLF+ NSS  D+S S   + + + E   FQDESKPN ET 
Sbjct: 227  ---TPD-----------ALDSLFSFNSSNSDLSLSNDETANFTPETILFQDESKPNLETQ 272

Query: 375  VPLSLLEKWLFEENILGQSHEDLMHEISSLDDSLNLF 265
            VPL+++EKWLF+E    Q  EDL+    SL+D+  LF
Sbjct: 273  VPLTMIEKWLFDEGAATQEQEDLID--MSLEDTAQLF 307


>gb|ABK59040.1| R2R3 Myb30 transcription factor [Vitis vinifera]
          Length = 307

 Score =  438 bits (1126), Expect = e-120
 Identities = 228/337 (67%), Positives = 255/337 (75%), Gaps = 2/337 (0%)
 Frame = -3

Query: 1269 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1090
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQ+HGPGNWRAVPT+TGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQDHGPGNWRAVPTSTGLLRCSKSCRLRWTNY 60

Query: 1089 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 910
            LRPGIKRGNFTD EEK IIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+K  
Sbjct: 61   LRPGIKRGNFTDQEEKTIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFP 120

Query: 909  TGLDGQNRDGFSTFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKASNG 730
            TG+D  N+DGFS    I+KGQWERRLQTDIH AK+ALCEALS+D    SS L DLK+SNG
Sbjct: 121  TGVDDHNQDGFS----ISKGQWERRLQTDIHMAKQALCEALSID---TSSSLPDLKSSNG 173

Query: 729  YYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDSSS 550
            Y   TR   PVQ+ TYASS ENI++LLEGWM N+PK   TNSE TQ S N+  G T    
Sbjct: 174  YNPNTR---PVQASTYASSAENIAKLLEGWMRNSPKSTRTNSEATQNSKNSSEGAT---- 226

Query: 549  REGTPSAENNNEIVSQGAFDSLFALNSSTPDVSPS--MSLDDSTENSFFQDESKPNFETP 376
               TP            A DSLF+ NSS  D+S S   + + + E   FQDESKPN ET 
Sbjct: 227  ---TPD-----------ALDSLFSFNSSNSDLSLSNDETANFTPETILFQDESKPNLETQ 272

Query: 375  VPLSLLEKWLFEENILGQSHEDLMHEISSLDDSLNLF 265
            VPL+++EKWLF+E    Q  EDL+    SL+D+  LF
Sbjct: 273  VPLTMIEKWLFDEGAATQEQEDLID--MSLEDTAQLF 307


>emb|CBI22219.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  425 bits (1092), Expect = e-116
 Identities = 229/340 (67%), Positives = 256/340 (75%), Gaps = 5/340 (1%)
 Frame = -3

Query: 1269 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1090
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 60

Query: 1089 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 910
            LRPGIKRGNFTDHEE+MIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+KLQ
Sbjct: 61   LRPGIKRGNFTDHEERMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 909  TG--LDGQNRDGFSTFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKAS 736
            TG   DG +RD     Q+I++GQWERRLQTDIH AK+AL EALSL+ KP++S        
Sbjct: 121  TGSSSDGHSRDVSLASQSISRGQWERRLQTDIHMAKQALHEALSLE-KPHTS-------- 171

Query: 735  NGYYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDS 556
                            +YASSTENI+RLLEGWM N+PKQA  +S TTQ SF N  G TDS
Sbjct: 172  ----------------SYASSTENIARLLEGWMRNSPKQARASSATTQNSFINTAG-TDS 214

Query: 555  SSREGTPSAENNNEIVSQGAFDSLF---ALNSSTPDVSPSMSLDDSTENSFFQDESKPNF 385
            +S EGTPSA NN +I    A++ LF   +L+SS  ++S S     S E SFFQ+ESKP+ 
Sbjct: 215  TSSEGTPSAANNEDIELTEAYEMLFGFDSLDSSNSEISQS----KSPEASFFQEESKPDL 270

Query: 384  ETPVPLSLLEKWLFEENILGQSHEDLMHEISSLDDSLNLF 265
               VPLS LEKWLFEE    Q  EDL     SLD+S + F
Sbjct: 271  SDQVPLSFLEKWLFEEG-GAQGKEDLTD--ISLDESPDFF 307


>gb|ADL36762.1| MYB domain class transcription factor [Malus x domestica]
          Length = 374

 Score =  422 bits (1086), Expect = e-116
 Identities = 238/382 (62%), Positives = 271/382 (70%), Gaps = 47/382 (12%)
 Frame = -3

Query: 1269 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1090
            MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWR+VPTNTGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 1089 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 910
            LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+KLQ
Sbjct: 61   LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 909  TGLDG----QNRDGFSTFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPN-------- 766
            TGLDG     ++DG S  Q I+KGQWERRLQTDIH AK+ALCEALS+D KPN        
Sbjct: 121  TGLDGHDHHNHQDGNSHDQPISKGQWERRLQTDIHMAKQALCEALSID-KPNVISTTTVS 179

Query: 765  -SSCLSDLKAS--NGYYSL----TRPIQPVQSGTYASSTENISRLLEGWMANAPKQA--E 613
                L DLK S   G Y++    +   +P  + TYAS+TENI++LLE WM N+PK +  +
Sbjct: 180  HDLHLQDLKPSINIGNYNINDNPSTSTRPHHTSTYASNTENIAKLLENWMKNSPKVSAHQ 239

Query: 612  TNSETTQ----YSFNNVN---------------GTTDSSSREGTPSAENNNEIVSQGAFD 490
            TNS+ T      SFNN N               G + S+S EG  SA    +     AFD
Sbjct: 240  TNSDQTNADQTNSFNNNNNNDNDNKGGATATTRGRSMSTSSEGAHSATTTPD----QAFD 295

Query: 489  SLFALNSSTPDVSPSMSLDDSTEN-------SFFQDESKPNFETPVPLSLLEKWLFEENI 331
            SLF+ NSS  DVS SMS+D++  N         FQDESKPN E  VPLSLLEKWL ++  
Sbjct: 296  SLFSFNSSPSDVSQSMSVDENNANFIADQASCLFQDESKPNLEGQVPLSLLEKWLLDD-A 354

Query: 330  LGQSHEDLMHEISSLDDSLNLF 265
               +HEDL++   SL++   LF
Sbjct: 355  APHAHEDLIN--ISLENGAGLF 374


Top