BLASTX nr result

ID: Coptis23_contig00007126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007126
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   167   1e-39
emb|CBI38032.3| unnamed protein product [Vitis vinifera]              167   1e-39
emb|CBI18352.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   163   2e-38
emb|CAN74342.1| hypothetical protein VITISV_005473 [Vitis vinifera]   163   2e-38

>ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 712

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/87 (94%), Positives = 87/87 (100%)
 Frame = +1

Query: 22  SYKGSRIPRPMRSWVESRLTTELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 201
           SYKGS+IPRPMRSWVES+L+TELLKAV++AGYKTPSPIQMAAIPLGLQQRDVIGIAETGS
Sbjct: 281 SYKGSKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 340

Query: 202 GKTAAFVLPMLTYISRLPPMSEENEAE 282
           GKTAAFVLPMLTYISRLPPMSEENEAE
Sbjct: 341 GKTAAFVLPMLTYISRLPPMSEENEAE 367


>emb|CBI38032.3| unnamed protein product [Vitis vinifera]
          Length = 797

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/87 (94%), Positives = 87/87 (100%)
 Frame = +1

Query: 22  SYKGSRIPRPMRSWVESRLTTELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 201
           SYKGS+IPRPMRSWVES+L+TELLKAV++AGYKTPSPIQMAAIPLGLQQRDVIGIAETGS
Sbjct: 295 SYKGSKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 354

Query: 202 GKTAAFVLPMLTYISRLPPMSEENEAE 282
           GKTAAFVLPMLTYISRLPPMSEENEAE
Sbjct: 355 GKTAAFVLPMLTYISRLPPMSEENEAE 381


>emb|CBI18352.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/87 (91%), Positives = 86/87 (98%)
 Frame = +1

Query: 22  SYKGSRIPRPMRSWVESRLTTELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 201
           SYKGS+IPRPMRSWVES+L+ ELLKAV++AGYKTPSPIQMAAIPLGLQQRDVIGIAETGS
Sbjct: 199 SYKGSKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 258

Query: 202 GKTAAFVLPMLTYISRLPPMSEENEAE 282
           GKTAAFVLPMLTYISRLPP+SEENEAE
Sbjct: 259 GKTAAFVLPMLTYISRLPPISEENEAE 285


>ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
           vinifera]
          Length = 709

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/87 (91%), Positives = 86/87 (98%)
 Frame = +1

Query: 22  SYKGSRIPRPMRSWVESRLTTELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 201
           SYKGS+IPRPMRSWVES+L+ ELLKAV++AGYKTPSPIQMAAIPLGLQQRDVIGIAETGS
Sbjct: 278 SYKGSKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 337

Query: 202 GKTAAFVLPMLTYISRLPPMSEENEAE 282
           GKTAAFVLPMLTYISRLPP+SEENEAE
Sbjct: 338 GKTAAFVLPMLTYISRLPPISEENEAE 364


>emb|CAN74342.1| hypothetical protein VITISV_005473 [Vitis vinifera]
          Length = 661

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/87 (91%), Positives = 86/87 (98%)
 Frame = +1

Query: 22  SYKGSRIPRPMRSWVESRLTTELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 201
           SYKGS+IPRPMRSWVES+L+ ELLKAV++AGYKTPSPIQMAAIPLGLQQRDVIGIAETGS
Sbjct: 248 SYKGSKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGS 307

Query: 202 GKTAAFVLPMLTYISRLPPMSEENEAE 282
           GKTAAFVLPMLTYISRLPP+SEENEAE
Sbjct: 308 GKTAAFVLPMLTYISRLPPISEENEAE 334


Top