BLASTX nr result

ID: Coptis23_contig00007116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007116
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucu...    61   8e-08
ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]    59   3e-07
ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max]        56   4e-06

>ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucumis sativus]
          Length = 446

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/86 (43%), Positives = 46/86 (53%)
 Frame = +1

Query: 1   ARVALNLLEIAATTAAGRKQSEMCSKIRPVEDLASDASSMPVGDEGCDVLRKEENGVGSF 180
           AR ALN LEI+A TAA R                   +S+ + D   +   +    V S 
Sbjct: 201 ARTALNALEISAITAAAR------------------TNSVQIDDRNVEDPDENTTNVESS 242

Query: 181 VAIVTLDDAKNALQCKHLAYDRAREE 258
           VA+VTLDD K ALQCKH+AYD+A EE
Sbjct: 243 VAVVTLDDVKEALQCKHIAYDKAGEE 268


>ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]
          Length = 513

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/86 (45%), Positives = 46/86 (53%)
 Frame = +1

Query: 1   ARVALNLLEIAATTAAGRKQSEMCSKIRPVEDLASDASSMPVGDEGCDVLRKEENGVGSF 180
           AR ALN LEI+A TAA R  S      R VED   + ++                   S 
Sbjct: 275 ARTALNALEISAITAAARTNSVQIDD-RNVEDPDENTTNFE-----------------SS 316

Query: 181 VAIVTLDDAKNALQCKHLAYDRAREE 258
           VA+VTLDD K ALQCKH+AYD+A EE
Sbjct: 317 VAVVTLDDVKEALQCKHIAYDKAGEE 342


>ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max]
          Length = 533

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 35/86 (40%), Positives = 45/86 (52%)
 Frame = +1

Query: 1   ARVALNLLEIAATTAAGRKQSEMCSKIRPVEDLASDASSMPVGDEGCDVLRKEENGVGSF 180
           ARVALN LEIAA TAA R Q  M   +   E+   D ++                   + 
Sbjct: 302 ARVALNALEIAAVTAAARLQQGMELDLHTNEECKDDVAA-------------------AA 342

Query: 181 VAIVTLDDAKNALQCKHLAYDRAREE 258
             +V++ DAK ALQCKH+AYD+A EE
Sbjct: 343 AVVVSVADAKEALQCKHVAYDKAGEE 368


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