BLASTX nr result

ID: Coptis23_contig00007114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007114
         (1578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543464.1| PREDICTED: protein disulfide isomerase-like ...   215   2e-53
ref|XP_003597231.1| Protein disulfide isomerase L-2 [Medicago tr...   214   3e-53
ref|XP_002313512.1| predicted protein [Populus trichocarpa] gi|2...   214   4e-53
gb|ABK94380.1| unknown [Populus trichocarpa]                          214   4e-53
ref|XP_002866387.1| hypothetical protein ARALYDRAFT_496212 [Arab...   213   1e-52

>ref|XP_003543464.1| PREDICTED: protein disulfide isomerase-like 1-4-like isoform 1
            [Glycine max]
          Length = 558

 Score =  215 bits (548), Expect = 2e-53
 Identities = 103/148 (69%), Positives = 119/148 (80%)
 Frame = +3

Query: 1083 KNLGKKLHNFFGISGDGPQVLAFTM*SDDAKKYRFNDEITLHSIKAFGEDFVGDKPKPFY 1262
            +++GK +  +FGISG+ P+VL +T  +DD KK+  + E+T   IKAFGEDFV DK KPFY
Sbjct: 346  EDVGKPVSEYFGISGNAPKVLGYTG-NDDGKKFVLDGEVTTDKIKAFGEDFVEDKLKPFY 404

Query: 1263 KSEPIPNSNDKDVKIVVGTNFDEIVFDESKDVLLEIYAPWCGHCQALEPAYNKLAKHLRC 1442
            KS+P+P SND DVKIVVG NFDEIV DESKDVLLEIYAPWCGHCQ+LEP YNKLAKHLR 
Sbjct: 405  KSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQSLEPIYNKLAKHLRN 464

Query: 1443 IDSLLIVKMDGTANEHPAVKVGGFPTFL 1526
            IDSL+I KMDGT NEHP  K  GFPT L
Sbjct: 465  IDSLVIAKMDGTTNEHPRAKPDGFPTLL 492



 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 31/64 (48%), Positives = 50/64 (78%)
 Frame = +2

Query: 860  YPMQYFFVDKLHKSYSGHKSKDAIVSSVKKRTGPGAFNITTLQDAELIFNSENKLVYAFL 1039
            +P  +FFVD +HK Y+G ++KDAIV+ ++K+ GPG +N+TT+++A+ I  +E K+V  FL
Sbjct: 150  FPTVHFFVDGIHKPYNGQRTKDAIVTWIRKKIGPGIYNLTTVEEAQRILTNETKVVLGFL 209

Query: 1040 DSLV 1051
            +SLV
Sbjct: 210  NSLV 213



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = +3

Query: 1227 EDFVGDKPKPFYKSEPIPNSNDKDVKIVVGTNFDEIVFDESKDVLLEIYAPWCGHCQALE 1406
            EDF  D  + + +    P  ++KDV ++   NF + V   ++ V++E YAPWCGHCQAL 
Sbjct: 59   EDFEEDDAEAYKQ----PEVDEKDVVVLKEKNFTDAV-KNNRFVMVEFYAPWCGHCQALA 113

Query: 1407 PAYNKLAKHLRCIDSLLIVKMDGTANEHPAVK--VGGFPT 1520
            P Y   A  L+  D +++ K+D T     A +  V GFPT
Sbjct: 114  PEYAAAATELKGED-VILAKVDATEENELAQQYDVQGFPT 152


>ref|XP_003597231.1| Protein disulfide isomerase L-2 [Medicago truncatula]
            gi|355486279|gb|AES67482.1| Protein disulfide isomerase
            L-2 [Medicago truncatula]
          Length = 564

 Score =  214 bits (546), Expect(2) = 3e-53
 Identities = 104/148 (70%), Positives = 119/148 (80%)
 Frame = +3

Query: 1083 KNLGKKLHNFFGISGDGPQVLAFTM*SDDAKKYRFNDEITLHSIKAFGEDFVGDKPKPFY 1262
            +++GK + ++FGISG  PQVLA+T  +DD +K+ F  E+T   IKAFGEDF+ DK KPF+
Sbjct: 347  EDVGKPVSDYFGISGTAPQVLAYTG-NDDGRKFVFEGEVTGDKIKAFGEDFLEDKLKPFF 405

Query: 1263 KSEPIPNSNDKDVKIVVGTNFDEIVFDESKDVLLEIYAPWCGHCQALEPAYNKLAKHLRC 1442
            KS+PIP SND DVKIVVG NFDEIV DESKDVLLEIYAPWCGHCQ LEP YNKLAKHLR 
Sbjct: 406  KSDPIPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQHLEPIYNKLAKHLRS 465

Query: 1443 IDSLLIVKMDGTANEHPAVKVGGFPTFL 1526
            IDSL+I KMDGT NEHP  K  GFPT L
Sbjct: 466  IDSLVIAKMDGTQNEHPRAKSDGFPTLL 493



 Score = 22.3 bits (46), Expect(2) = 3e-53
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 1531 PAGNNSTNPINVE 1569
            PAGN S +PI VE
Sbjct: 496  PAGNKSFDPITVE 508



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 14/126 (11%)
 Frame = +2

Query: 716  VLSHGRSIRLVFESPFCDLCHV-------GCACMAGQSIFRFFSCGFADLDSELA----- 859
            V++  R + + F +P+C  C             + G ++    +   A  D+E+A     
Sbjct: 91   VVNKNRFVLVEFYAPWCGHCQALAPEYAAAATELKGDNVI--LAKLDATEDNEVAQKFDV 148

Query: 860  --YPMQYFFVDKLHKSYSGHKSKDAIVSSVKKRTGPGAFNITTLQDAELIFNSENKLVYA 1033
              +P   FF+D +HKSY+G ++K+AIV+ +KK+TGPG  NIT+L +A+ I +SE K+V  
Sbjct: 149  QGFPTILFFIDGVHKSYTGQRTKEAIVTWIKKKTGPGIHNITSLDEAKTILSSETKVVLG 208

Query: 1034 FLDSLV 1051
            FL+SLV
Sbjct: 209  FLNSLV 214



 Score = 75.9 bits (185), Expect = 3e-11
 Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
 Frame = +3

Query: 1227 EDFVGDKPKPFYKSEPIPNSNDKDVKIVVGTNFDEIVFDESKDVLLEIYAPWCGHCQALE 1406
            EDF G +    +++   P  ++KDV ++  TNF ++V ++++ VL+E YAPWCGHCQAL 
Sbjct: 59   EDFSGYEDSEIHQA---PEFDEKDVVVLNDTNFTDVV-NKNRFVLVEFYAPWCGHCQALA 114

Query: 1407 PAYNKLAKHLRCIDSLLIVKMDGTANEHPAVK--VGGFPTFL 1526
            P Y   A  L+  D++++ K+D T +   A K  V GFPT L
Sbjct: 115  PEYAAAATELKG-DNVILAKLDATEDNEVAQKFDVQGFPTIL 155


>ref|XP_002313512.1| predicted protein [Populus trichocarpa] gi|222849920|gb|EEE87467.1|
            predicted protein [Populus trichocarpa]
          Length = 583

 Score =  214 bits (546), Expect = 4e-53
 Identities = 101/148 (68%), Positives = 121/148 (81%)
 Frame = +3

Query: 1083 KNLGKKLHNFFGISGDGPQVLAFTM*SDDAKKYRFNDEITLHSIKAFGEDFVGDKPKPFY 1262
            +++GK +  +FGISG  P+VLA+T  +DDAKK+ F+ ++TL  IKAFGEDF+ DK KPF+
Sbjct: 371  EDVGKPVSEYFGISGTAPKVLAYTG-NDDAKKFVFDGDVTLDKIKAFGEDFIEDKLKPFF 429

Query: 1263 KSEPIPNSNDKDVKIVVGTNFDEIVFDESKDVLLEIYAPWCGHCQALEPAYNKLAKHLRC 1442
            KS+P+P SND DVKIVVG NFDEIV DESKDVLLEIYAPWCGHCQ+LEP YNKLA HLR 
Sbjct: 430  KSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQSLEPTYNKLATHLRG 489

Query: 1443 IDSLLIVKMDGTANEHPAVKVGGFPTFL 1526
            I+S++I KMDGT NEHP  K  GFPT L
Sbjct: 490  IESIVIAKMDGTTNEHPRAKSDGFPTLL 517



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 35/64 (54%), Positives = 47/64 (73%)
 Frame = +2

Query: 860  YPMQYFFVDKLHKSYSGHKSKDAIVSSVKKRTGPGAFNITTLQDAELIFNSENKLVYAFL 1039
            +P  YFFVD +H+ Y G ++KD IV+ +KK+ GPG +NITT+ DAE +  SE KLV  FL
Sbjct: 175  FPTVYFFVDGVHRPYPGPRNKDGIVTWIKKKIGPGIYNITTVDDAERLLTSETKLVLGFL 234

Query: 1040 DSLV 1051
            +SLV
Sbjct: 235  NSLV 238



 Score = 64.3 bits (155), Expect = 9e-08
 Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = +3

Query: 1278 PNSNDKDVKIVVGTNFDEIVFDESKDVLLEIYAPWCGHCQALEPAYNKLAKHLRCIDSLL 1457
            P  +DKDV ++   NF + V  ++K V++E YAPWCGHCQ+L P Y   A  L+  + ++
Sbjct: 97   PEIDDKDVVVLKEGNFSDFV-TKNKFVMVEFYAPWCGHCQSLAPEYAAAATELKA-EEVM 154

Query: 1458 IVKMDGTANEHPAVK--VGGFPT 1520
            + K+D T     A +  + GFPT
Sbjct: 155  LAKVDATEENELAQEYDIQGFPT 177


>gb|ABK94380.1| unknown [Populus trichocarpa]
          Length = 461

 Score =  214 bits (546), Expect = 4e-53
 Identities = 101/148 (68%), Positives = 121/148 (81%)
 Frame = +3

Query: 1083 KNLGKKLHNFFGISGDGPQVLAFTM*SDDAKKYRFNDEITLHSIKAFGEDFVGDKPKPFY 1262
            +++GK +  +FGISG  P+VLA+T  +DDAKK+ F+ ++TL  IKAFGEDF+ DK KPF+
Sbjct: 249  EDVGKPVSEYFGISGTAPKVLAYTG-NDDAKKFVFDGDVTLDKIKAFGEDFIEDKLKPFF 307

Query: 1263 KSEPIPNSNDKDVKIVVGTNFDEIVFDESKDVLLEIYAPWCGHCQALEPAYNKLAKHLRC 1442
            KS+P+P SND DVKIVVG NFDEIV DESKDVLLEIYAPWCGHCQ+LEP YNKLA HLR 
Sbjct: 308  KSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQSLEPTYNKLATHLRG 367

Query: 1443 IDSLLIVKMDGTANEHPAVKVGGFPTFL 1526
            I+S++I KMDGT NEHP  K  GFPT L
Sbjct: 368  IESIVIAKMDGTTNEHPRAKSDGFPTLL 395



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 35/64 (54%), Positives = 47/64 (73%)
 Frame = +2

Query: 860  YPMQYFFVDKLHKSYSGHKSKDAIVSSVKKRTGPGAFNITTLQDAELIFNSENKLVYAFL 1039
            +P  YFFVD +H+ Y G ++KD IV+ +KK+ GPG +NITT+ DAE +  SE KLV  FL
Sbjct: 53   FPTVYFFVDGVHRPYPGPRNKDGIVTWIKKKIGPGIYNITTVDDAERLLTSETKLVLGFL 112

Query: 1040 DSLV 1051
            +SLV
Sbjct: 113  NSLV 116


>ref|XP_002866387.1| hypothetical protein ARALYDRAFT_496212 [Arabidopsis lyrata subsp.
            lyrata] gi|297312222|gb|EFH42646.1| hypothetical protein
            ARALYDRAFT_496212 [Arabidopsis lyrata subsp. lyrata]
          Length = 597

 Score =  213 bits (541), Expect = 1e-52
 Identities = 100/148 (67%), Positives = 118/148 (79%)
 Frame = +3

Query: 1083 KNLGKKLHNFFGISGDGPQVLAFTM*SDDAKKYRFNDEITLHSIKAFGEDFVGDKPKPFY 1262
            ++ GK +  +FG+SG+GP+++A+T  ++D KKY F+ EI    IK FGEDF+ DK KPFY
Sbjct: 372  EDYGKPVAEYFGVSGNGPKLIAYTG-NEDPKKYFFDGEIKSDKIKTFGEDFLNDKLKPFY 430

Query: 1263 KSEPIPNSNDKDVKIVVGTNFDEIVFDESKDVLLEIYAPWCGHCQALEPAYNKLAKHLRC 1442
            KS+PIP  ND DVKIVVG NFDEIV D+SKDVLLE+YAPWCGHCQALEP YNKLAKHLR 
Sbjct: 431  KSDPIPEKNDGDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMYNKLAKHLRS 490

Query: 1443 IDSLLIVKMDGTANEHPAVKVGGFPTFL 1526
            IDSL+I KMDGT NEHP  K  GFPT L
Sbjct: 491  IDSLVIAKMDGTTNEHPKAKAEGFPTIL 518



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 33/64 (51%), Positives = 46/64 (71%)
 Frame = +2

Query: 860  YPMQYFFVDKLHKSYSGHKSKDAIVSSVKKRTGPGAFNITTLQDAELIFNSENKLVYAFL 1039
            +P   FFVD  HK Y+G ++K+ IV+ VKK+ GPG +N+TTL DAE +  S NK+V  +L
Sbjct: 176  FPTILFFVDGEHKPYTGGRTKETIVTWVKKKIGPGVYNLTTLDDAEKVLTSGNKVVLGYL 235

Query: 1040 DSLV 1051
            +SLV
Sbjct: 236  NSLV 239



 Score = 68.2 bits (165), Expect = 6e-09
 Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
 Frame = +3

Query: 1272 PIPNSNDKDVKIVVGTNFDEIVFDESKDVLLEIYAPWCGHCQALEPAYNKLAKHLRCIDS 1451
            P P  ++KDV ++   NF +++ + ++ VL+E YAPWCGHCQ+L P Y   A  L+  D 
Sbjct: 96   PTPEIDEKDVVVIKERNFTDVI-ENNQYVLVEFYAPWCGHCQSLVPEYAAAATELK-DDG 153

Query: 1452 LLIVKMDGTANEHPA--VKVGGFPTFL 1526
            +++ K+D T     A    V GFPT L
Sbjct: 154  VVLAKIDATEENELAQEYSVQGFPTIL 180


Top