BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007104
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei...   292   2e-81
gb|ACJ84781.1| unknown [Medicago truncatula]                          290   5e-80
ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotei...   291   6e-80
emb|CBI36876.3| unnamed protein product [Vitis vinifera]              287   6e-80
gb|ACU24174.1| unknown [Glycine max]                                  289   2e-79

>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
          Length = 245

 Score =  292 bits (747), Expect(2) = 2e-81
 Identities = 153/206 (74%), Positives = 167/206 (81%), Gaps = 5/206 (2%)
 Frame = +2

Query: 53  PNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDVTSATN 232
           PN TIYINNLNEK+KL+ LKKSL AVFSQFGKI++VLAFKTLKH GQAWVVF++V+SATN
Sbjct: 12  PNMTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATN 71

Query: 233 ALKQMQGFPFYDKPMRIQYAKTKSDVIAKADNTFVPXXXXXXXXXXXXXXXXXQQHDANQ 412
           AL+QMQGFPFYDKPMRIQYAKTKSDVIAKAD TFVP                 +QHDANQ
Sbjct: 72  ALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVP-RERRRRHDDRAGRKRREQHDANQ 130

Query: 413 AGMGLNP-YAGAYGATP---MLPYPGVAKS-VQEAPALPNNILFVQNLPHETNPMMLQMR 577
           AG+G+NP Y GAYGA P    +PY G AKS V EAPA PNNILF+QNLPHE  PMMLQM 
Sbjct: 131 AGVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMF 190

Query: 578 FTQYEGFKEVRMVEAKPGIAFVEYGN 655
           F QY GFKEVRMVEAKPGIAFVEYG+
Sbjct: 191 FCQYPGFKEVRMVEAKPGIAFVEYGD 216



 Score = 38.1 bits (87), Expect(2) = 2e-81
 Identities = 21/28 (75%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +1

Query: 742 MQSTQAMHGLQGYMINAQ-PMQITYAKK 822
           MQST AM GLQG  IN Q PM ITYAKK
Sbjct: 218 MQSTVAMQGLQGLKINQQNPMLITYAKK 245


>gb|ACJ84781.1| unknown [Medicago truncatula]
          Length = 245

 Score =  290 bits (743), Expect(2) = 5e-80
 Identities = 153/209 (73%), Positives = 169/209 (80%), Gaps = 5/209 (2%)
 Frame = +2

Query: 44  DAPPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDVTS 223
           + P N TIYINNLNEK+K+D LKKSL AVFSQFGKI++VLAFKTLKH GQAWV+F+DVTS
Sbjct: 9   EPPQNMTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTS 68

Query: 224 ATNALKQMQGFPFYDKPMRIQYAKTKSDVIAKADNTFVPXXXXXXXXXXXXXXXXXQQHD 403
           A+NAL+QMQGFPFYDKPMRIQYA+TKSDVIAKA+ TFVP                  Q+D
Sbjct: 69  ASNALRQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVP-REKRKRHDDKAGKKRKDQND 127

Query: 404 ANQAGMGLNP-YAGAYGATPML---PYPGVAKS-VQEAPALPNNILFVQNLPHETNPMML 568
           AN AG GLNP YAGAYGATP L   PYPG AKS + EAPA PNNILF+QNLP+ET PMML
Sbjct: 128 ANLAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMML 187

Query: 569 QMRFTQYEGFKEVRMVEAKPGIAFVEYGN 655
           QM F QY GFKEVRMVEAKPGIAFVEYG+
Sbjct: 188 QMLFLQYPGFKEVRMVEAKPGIAFVEYGD 216



 Score = 35.0 bits (79), Expect(2) = 5e-80
 Identities = 19/28 (67%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 742 MQSTQAMHGLQGYMINAQ-PMQITYAKK 822
           MQST AM  LQG+ I  Q PM ITYAKK
Sbjct: 218 MQSTMAMQALQGFKIAPQNPMLITYAKK 245


>ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
          Length = 241

 Score =  291 bits (744), Expect(2) = 6e-80
 Identities = 149/208 (71%), Positives = 167/208 (80%), Gaps = 2/208 (0%)
 Frame = +2

Query: 38  TDDAPPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDV 217
           T + P N TIYINNLNEK+K+D LKKSL AVF+QFGKI++VLAFKTLKH GQAWVVF+D 
Sbjct: 7   TPEIPQNNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDA 66

Query: 218 TSATNALKQMQGFPFYDKPMRIQYAKTKSDVIAKADNTFVPXXXXXXXXXXXXXXXXXQQ 397
           +SA+NAL+QMQGFPFYDKPMRIQYAKTKSD+IAKAD TFVP                  Q
Sbjct: 67  SSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVP--REKRKRHDEKAKKRKDQ 124

Query: 398 HDANQAGMGLNP-YAGAYGATPMLPYPGVAKS-VQEAPALPNNILFVQNLPHETNPMMLQ 571
           HD+N AGMGLNP YAGAYGA P + YPG AKS V EAPA PNNILF+QNLP+++ PMMLQ
Sbjct: 125 HDSNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQ 184

Query: 572 MRFTQYEGFKEVRMVEAKPGIAFVEYGN 655
           M F QY GFKEVRMVE KPGIAFVEYG+
Sbjct: 185 MLFLQYPGFKEVRMVETKPGIAFVEYGD 212



 Score = 34.3 bits (77), Expect(2) = 6e-80
 Identities = 19/28 (67%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 742 MQSTQAMHGLQGYMINAQ-PMQITYAKK 822
           MQST AM  LQG+ I  Q PM ITYAKK
Sbjct: 214 MQSTVAMQTLQGFKITPQNPMLITYAKK 241


>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  287 bits (734), Expect(2) = 6e-80
 Identities = 151/203 (74%), Positives = 165/203 (81%), Gaps = 5/203 (2%)
 Frame = +2

Query: 62  TIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDVTSATNALK 241
           TIYINNLNEK+KL+ LKKSL AVFSQFGKI++VLAFKTLKH GQAWVVF++V+SATNAL+
Sbjct: 2   TIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNALR 61

Query: 242 QMQGFPFYDKPMRIQYAKTKSDVIAKADNTFVPXXXXXXXXXXXXXXXXXQQHDANQAGM 421
           QMQGFPFYDKPMRIQYAKTKSDVIAKAD TFVP                 +QHDANQAG+
Sbjct: 62  QMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVP-RERRRRHDDRAGRKRREQHDANQAGV 120

Query: 422 GLNP-YAGAYGATP---MLPYPGVAKS-VQEAPALPNNILFVQNLPHETNPMMLQMRFTQ 586
           G+NP Y GAYGA P    +PY G AKS V EAPA PNNILF+QNLPHE  PMMLQM F Q
Sbjct: 121 GVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQ 180

Query: 587 YEGFKEVRMVEAKPGIAFVEYGN 655
           Y GFKEVRMVEAKPGIAFVEYG+
Sbjct: 181 YPGFKEVRMVEAKPGIAFVEYGD 203



 Score = 38.1 bits (87), Expect(2) = 6e-80
 Identities = 21/28 (75%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +1

Query: 742 MQSTQAMHGLQGYMINAQ-PMQITYAKK 822
           MQST AM GLQG  IN Q PM ITYAKK
Sbjct: 205 MQSTVAMQGLQGLKINQQNPMLITYAKK 232


>gb|ACU24174.1| unknown [Glycine max]
          Length = 241

 Score =  289 bits (739), Expect(2) = 2e-79
 Identities = 148/208 (71%), Positives = 166/208 (79%), Gaps = 2/208 (0%)
 Frame = +2

Query: 38  TDDAPPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDV 217
           T + P N  IYINNLNEK+K+D LKKSL AVF+QFGKI++VLAFKTLKH GQAWVVF+D 
Sbjct: 7   TPEIPQNNAIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDA 66

Query: 218 TSATNALKQMQGFPFYDKPMRIQYAKTKSDVIAKADNTFVPXXXXXXXXXXXXXXXXXQQ 397
           +SA+NAL+QMQGFPFYDKPMRIQYAKTKSD+IAKAD TFVP                  Q
Sbjct: 67  SSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVP--REKRKRHDEKAKKRKDQ 124

Query: 398 HDANQAGMGLNP-YAGAYGATPMLPYPGVAKS-VQEAPALPNNILFVQNLPHETNPMMLQ 571
           HD+N AGMGLNP YAGAYGA P + YPG AKS V EAPA PNNILF+QNLP+++ PMMLQ
Sbjct: 125 HDSNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQ 184

Query: 572 MRFTQYEGFKEVRMVEAKPGIAFVEYGN 655
           M F QY GFKEVRMVE KPGIAFVEYG+
Sbjct: 185 MLFLQYPGFKEVRMVETKPGIAFVEYGD 212



 Score = 34.3 bits (77), Expect(2) = 2e-79
 Identities = 19/28 (67%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 742 MQSTQAMHGLQGYMINAQ-PMQITYAKK 822
           MQST AM  LQG+ I  Q PM ITYAKK
Sbjct: 214 MQSTVAMQTLQGFKITPQNPMLITYAKK 241