BLASTX nr result
ID: Coptis23_contig00007093
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00007093
(1138 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004161538.1| PREDICTED: transcription factor EMB1444-like... 114 6e-43
emb|CBI37092.3| unnamed protein product [Vitis vinifera] 122 2e-36
ref|XP_003632423.1| PREDICTED: uncharacterized basic helix-loop-... 122 2e-36
ref|XP_004146986.1| PREDICTED: transcription factor EMB1444-like... 77 7e-32
ref|XP_002300784.1| predicted protein [Populus trichocarpa] gi|2... 115 5e-30
>ref|XP_004161538.1| PREDICTED: transcription factor EMB1444-like [Cucumis sativus]
Length = 691
Score = 114 bits (284), Expect(3) = 6e-43
Identities = 60/100 (60%), Positives = 64/100 (64%)
Frame = +3
Query: 324 PDETLFDDNAPVNLRDGRYLQDPLGLSVAKMSYLVYSLGEGIIGQVAVTGKHQWIFADKP 503
P E F DG Y D LGL+VAKMSY VYSLGEGI+GQVAVTGKHQWI AD+
Sbjct: 50 PPEGKFFRKTLETFYDGHYSHDALGLAVAKMSYHVYSLGEGIVGQVAVTGKHQWITADEQ 109
Query: 504 TSRCWSSSEYCDGWQTQFSAGIKTIAXXXXXXXXXXQLGS 623
S+ EYCDGWQTQFSAGIKTI QLGS
Sbjct: 110 IPNFSSTIEYCDGWQTQFSAGIKTIVVVAVVPHGVLQLGS 149
Score = 73.9 bits (180), Expect(3) = 6e-43
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = +1
Query: 94 MGLTHLQETLRSLCFKSEWKYAVFWKLKHRTRMMLTWEDAYYAN 225
MG T L + L+S C SEWKYAVFWKLKHR RM+LTWED YY N
Sbjct: 1 MGTTDLHQILKSFCCNSEWKYAVFWKLKHRARMVLTWEDGYYDN 44
Score = 34.7 bits (78), Expect(3) = 6e-43
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Frame = +1
Query: 718 VAEDIKLVTRIKDVFYSLQSSSMKTI-PYPICYTT------QSSSCLTE----------V 846
V ED+ LVTRI++VF +LQ SS I P C ++ S S TE V
Sbjct: 153 VTEDVNLVTRIRNVFLTLQESSAGEIKPMHSCKSSGYMADIPSRSLATEKGEVASVSKNV 212
Query: 847 SARVSGSEVFSDFPT 891
+SGSE F T
Sbjct: 213 GLELSGSEAFESLTT 227
>emb|CBI37092.3| unnamed protein product [Vitis vinifera]
Length = 774
Score = 122 bits (306), Expect(2) = 2e-36
Identities = 61/90 (67%), Positives = 65/90 (72%)
Frame = +3
Query: 354 PVNLRDGRYLQDPLGLSVAKMSYLVYSLGEGIIGQVAVTGKHQWIFADKPTSRCWSSSEY 533
P L DG Y D LGL+VAKMSY VYSLGEGI+GQVAVTGKHQWIF+DK T+ SS EY
Sbjct: 84 PDTLHDGHYSHDALGLAVAKMSYHVYSLGEGIVGQVAVTGKHQWIFSDKHTTNSSSSFEY 143
Query: 534 CDGWQTQFSAGIKTIAXXXXXXXXXXQLGS 623
CDGWQ QFSAGIKTI QLGS
Sbjct: 144 CDGWQAQFSAGIKTIVVVAVVPHGVVQLGS 173
Score = 57.4 bits (137), Expect(2) = 2e-36
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = +1
Query: 718 VAEDIKLVTRIKDVFYSLQSSSMKTIPYPICYTTQSSSCLTEVSARVSGSEVFSD 882
V ED+KLV+RIKDVF++LQ SS+ IP+PI + +SS ++++S R S S++ D
Sbjct: 177 VVEDLKLVSRIKDVFFALQDSSVAYIPHPIQCSMKSSLAMSDISTRGSASDIVPD 231
Score = 80.5 bits (197), Expect = 7e-13
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +1
Query: 103 THLQETLRSLCFKSEWKYAVFWKLKHRTRMMLTWEDAYYAN 225
T LQ+TLRSLCF +EWKYAVFWKLKHR RM+LTWEDAYY N
Sbjct: 28 TDLQQTLRSLCFNTEWKYAVFWKLKHRARMVLTWEDAYYDN 68
>ref|XP_003632423.1| PREDICTED: uncharacterized basic helix-loop-helix protein
At1g06150-like [Vitis vinifera]
Length = 749
Score = 122 bits (306), Expect(2) = 2e-36
Identities = 61/90 (67%), Positives = 65/90 (72%)
Frame = +3
Query: 354 PVNLRDGRYLQDPLGLSVAKMSYLVYSLGEGIIGQVAVTGKHQWIFADKPTSRCWSSSEY 533
P L DG Y D LGL+VAKMSY VYSLGEGI+GQVAVTGKHQWIF+DK T+ SS EY
Sbjct: 59 PDTLHDGHYSHDALGLAVAKMSYHVYSLGEGIVGQVAVTGKHQWIFSDKHTTNSSSSFEY 118
Query: 534 CDGWQTQFSAGIKTIAXXXXXXXXXXQLGS 623
CDGWQ QFSAGIKTI QLGS
Sbjct: 119 CDGWQAQFSAGIKTIVVVAVVPHGVVQLGS 148
Score = 57.4 bits (137), Expect(2) = 2e-36
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = +1
Query: 718 VAEDIKLVTRIKDVFYSLQSSSMKTIPYPICYTTQSSSCLTEVSARVSGSEVFSD 882
V ED+KLV+RIKDVF++LQ SS+ IP+PI + +SS ++++S R S S++ D
Sbjct: 152 VVEDLKLVSRIKDVFFALQDSSVAYIPHPIQCSMKSSLAMSDISTRGSASDIVPD 206
Score = 80.5 bits (197), Expect = 7e-13
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +1
Query: 103 THLQETLRSLCFKSEWKYAVFWKLKHRTRMMLTWEDAYYAN 225
T LQ+TLRSLCF +EWKYAVFWKLKHR RM+LTWEDAYY N
Sbjct: 3 TDLQQTLRSLCFNTEWKYAVFWKLKHRARMVLTWEDAYYDN 43
>ref|XP_004146986.1| PREDICTED: transcription factor EMB1444-like [Cucumis sativus]
Length = 677
Score = 76.6 bits (187), Expect(3) = 7e-32
Identities = 47/100 (47%), Positives = 52/100 (52%)
Frame = +3
Query: 324 PDETLFDDNAPVNLRDGRYLQDPLGLSVAKMSYLVYSLGEGIIGQVAVTGKHQWIFADKP 503
P E F DG Y D LGL+VAKMSY VYSLGEGI+GQVAVTGKHQWI AD+
Sbjct: 50 PPEGKFFRKTLETFYDGHYSHDALGLAVAKMSYHVYSLGEGIVGQVAVTGKHQWITADEQ 109
Query: 504 TSRCWSSSEYCDGWQTQFSAGIKTIAXXXXXXXXXXQLGS 623
FS+ I+TI QLGS
Sbjct: 110 I--------------PNFSSTIETIVVVAVVPHGVLQLGS 135
Score = 73.9 bits (180), Expect(3) = 7e-32
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = +1
Query: 94 MGLTHLQETLRSLCFKSEWKYAVFWKLKHRTRMMLTWEDAYYAN 225
MG T L + L+S C SEWKYAVFWKLKHR RM+LTWED YY N
Sbjct: 1 MGTTDLHQILKSFCCNSEWKYAVFWKLKHRARMVLTWEDGYYDN 44
Score = 34.7 bits (78), Expect(3) = 7e-32
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Frame = +1
Query: 718 VAEDIKLVTRIKDVFYSLQSSSMKTI-PYPICYTT------QSSSCLTE----------V 846
V ED+ LVTRI++VF +LQ SS I P C ++ S S TE V
Sbjct: 139 VTEDVNLVTRIRNVFLTLQESSAGEIKPMHSCKSSGYMADIPSRSLATEKGEVASVSKNV 198
Query: 847 SARVSGSEVFSDFPT 891
+SGSE F T
Sbjct: 199 GLELSGSEAFESLTT 213
>ref|XP_002300784.1| predicted protein [Populus trichocarpa] gi|222842510|gb|EEE80057.1|
predicted protein [Populus trichocarpa]
Length = 703
Score = 115 bits (289), Expect(2) = 5e-30
Identities = 57/87 (65%), Positives = 65/87 (74%)
Frame = +3
Query: 363 LRDGRYLQDPLGLSVAKMSYLVYSLGEGIIGQVAVTGKHQWIFADKPTSRCWSSSEYCDG 542
L G Y +DPLGL+VAKMSY VYSLGEGI+GQVAV+GKHQWIFADK + +SS E+ DG
Sbjct: 62 LHGGHYTRDPLGLAVAKMSYHVYSLGEGIVGQVAVSGKHQWIFADKYAASSFSSHEFSDG 121
Query: 543 WQTQFSAGIKTIAXXXXXXXXXXQLGS 623
WQ+QFSAGIKTI QLGS
Sbjct: 122 WQSQFSAGIKTIVVVAVVPYGVVQLGS 148
Score = 42.7 bits (99), Expect(2) = 5e-30
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = +1
Query: 718 VAEDIKLVTRIKDVFYSLQSSSMKTIPYPICYTTQSSSC 834
V ED+ LVTRIKDVF++LQ SS++ + P+ ++ +++ C
Sbjct: 152 VIEDVNLVTRIKDVFFTLQDSSVRHVSGPLQHSMKNALC 190
Score = 72.0 bits (175), Expect = 3e-10
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = +1
Query: 109 LQETLRSLCFKSEWKYAVFWKLKHRTRMMLTWEDAYYAN 225
L TLRSLCF ++W YAVFWKLKHR RM+LTWED YY N
Sbjct: 5 LHNTLRSLCFNTDWNYAVFWKLKHRARMVLTWEDGYYEN 43