BLASTX nr result

ID: Coptis23_contig00007088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007088
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33909.3| unnamed protein product [Vitis vinifera]              224   3e-56
gb|AFK36740.1| unknown [Lotus japonicus]                              218   1e-54
ref|XP_002528249.1| conserved hypothetical protein [Ricinus comm...   218   1e-54
ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatul...   216   9e-54
ref|XP_002281099.1| PREDICTED: protein LOL1-like [Vitis vinifera]     215   1e-53

>emb|CBI33909.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  224 bits (570), Expect = 3e-56
 Identities = 118/183 (64%), Positives = 129/183 (70%)
 Frame = -3

Query: 889 CNLQRVDEDGKDGSLLLCLSLQAFYSLEEKDTFIHRYAMPVXXXXXXXXXXXXXXXXPNG 710
           CNLQR  EDG++   +     +   + + K T + R  MPV                 NG
Sbjct: 49  CNLQRNGEDGRNIDAVWAKGRKLLRAWQRKHT-LARITMPVPLAPYPTPPVPFTQPA-NG 106

Query: 709 AQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRGAT 530
           AQSQLVCSGCRNLLLYPVGA S              PGTEMAQLVCGGCHTLLMYIRGAT
Sbjct: 107 AQSQLVCSGCRNLLLYPVGAKSVCCAVCNVVTAVPLPGTEMAQLVCGGCHTLLMYIRGAT 166

Query: 529 SVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTTEQ 350
           SVQCSCCHT+NLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVGAS S+TE 
Sbjct: 167 SVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASTSSTEH 226

Query: 349 KFN 341
           KFN
Sbjct: 227 KFN 229


>gb|AFK36740.1| unknown [Lotus japonicus]
          Length = 145

 Score =  218 bits (556), Expect = 1e-54
 Identities = 106/126 (84%), Positives = 110/126 (87%)
 Frame = -3

Query: 715 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 536
           NGAQSQLVCSGCRNLL+YPVGATS              PGTEMAQLVCGGCHTLLMYIRG
Sbjct: 20  NGAQSQLVCSGCRNLLVYPVGATSVCCAVCNAVTSVPPPGTEMAQLVCGGCHTLLMYIRG 79

Query: 535 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 356
           ATSVQCSCCHTVNLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVG S STT
Sbjct: 80  ATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGTSASTT 139

Query: 355 EQKFNT 338
           EQKF+T
Sbjct: 140 EQKFST 145


>ref|XP_002528249.1| conserved hypothetical protein [Ricinus communis]
           gi|223532335|gb|EEF34134.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  218 bits (556), Expect = 1e-54
 Identities = 105/126 (83%), Positives = 110/126 (87%)
 Frame = -3

Query: 715 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 536
           NGAQSQLVCSGCRNLLLYP GATS              PGTEMAQLVCGGCHTLLMYIRG
Sbjct: 22  NGAQSQLVCSGCRNLLLYPAGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 81

Query: 535 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 356
           ATSVQCSCCHT+NLAMEANQVAHVNCGNCRMLLMYQYGARSVKC+VC+FVT+VGAS STT
Sbjct: 82  ATSVQCSCCHTINLAMEANQVAHVNCGNCRMLLMYQYGARSVKCSVCNFVTAVGASTSTT 141

Query: 355 EQKFNT 338
           EQKFN+
Sbjct: 142 EQKFNS 147


>ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatula]
           gi|217075072|gb|ACJ85896.1| unknown [Medicago
           truncatula] gi|217075520|gb|ACJ86120.1| unknown
           [Medicago truncatula] gi|355509677|gb|AES90819.1| Zinc
           finger protein LSD1 [Medicago truncatula]
           gi|388499772|gb|AFK37952.1| unknown [Medicago
           truncatula] gi|388500106|gb|AFK38119.1| unknown
           [Medicago truncatula]
          Length = 154

 Score =  216 bits (549), Expect = 9e-54
 Identities = 107/127 (84%), Positives = 111/127 (87%), Gaps = 1/127 (0%)
 Frame = -3

Query: 715 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 536
           NGAQSQLVCSGCRNLL+YPVGATS              PGTEMAQLVCGGCHTLLMYIRG
Sbjct: 28  NGAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 87

Query: 535 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 356
           ATSVQCSCCHTVNLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVGAS STT
Sbjct: 88  ATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASASTT 147

Query: 355 E-QKFNT 338
           E QKF+T
Sbjct: 148 EPQKFST 154


>ref|XP_002281099.1| PREDICTED: protein LOL1-like [Vitis vinifera]
          Length = 145

 Score =  215 bits (547), Expect = 1e-53
 Identities = 104/125 (83%), Positives = 108/125 (86%)
 Frame = -3

Query: 715 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 536
           NGAQSQLVCSGCRNLLLYPVGA S              PGTEMAQLVCGGCHTLLMYIRG
Sbjct: 20  NGAQSQLVCSGCRNLLLYPVGAKSVCCAVCNVVTAVPLPGTEMAQLVCGGCHTLLMYIRG 79

Query: 535 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 356
           ATSVQCSCCHT+NLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVGAS S+T
Sbjct: 80  ATSVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASTSST 139

Query: 355 EQKFN 341
           E KFN
Sbjct: 140 EHKFN 144


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