BLASTX nr result
ID: Coptis23_contig00007088
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00007088 (981 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI33909.3| unnamed protein product [Vitis vinifera] 224 3e-56 gb|AFK36740.1| unknown [Lotus japonicus] 218 1e-54 ref|XP_002528249.1| conserved hypothetical protein [Ricinus comm... 218 1e-54 ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatul... 216 9e-54 ref|XP_002281099.1| PREDICTED: protein LOL1-like [Vitis vinifera] 215 1e-53 >emb|CBI33909.3| unnamed protein product [Vitis vinifera] Length = 230 Score = 224 bits (570), Expect = 3e-56 Identities = 118/183 (64%), Positives = 129/183 (70%) Frame = -3 Query: 889 CNLQRVDEDGKDGSLLLCLSLQAFYSLEEKDTFIHRYAMPVXXXXXXXXXXXXXXXXPNG 710 CNLQR EDG++ + + + + K T + R MPV NG Sbjct: 49 CNLQRNGEDGRNIDAVWAKGRKLLRAWQRKHT-LARITMPVPLAPYPTPPVPFTQPA-NG 106 Query: 709 AQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRGAT 530 AQSQLVCSGCRNLLLYPVGA S PGTEMAQLVCGGCHTLLMYIRGAT Sbjct: 107 AQSQLVCSGCRNLLLYPVGAKSVCCAVCNVVTAVPLPGTEMAQLVCGGCHTLLMYIRGAT 166 Query: 529 SVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTTEQ 350 SVQCSCCHT+NLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVGAS S+TE Sbjct: 167 SVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASTSSTEH 226 Query: 349 KFN 341 KFN Sbjct: 227 KFN 229 >gb|AFK36740.1| unknown [Lotus japonicus] Length = 145 Score = 218 bits (556), Expect = 1e-54 Identities = 106/126 (84%), Positives = 110/126 (87%) Frame = -3 Query: 715 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 536 NGAQSQLVCSGCRNLL+YPVGATS PGTEMAQLVCGGCHTLLMYIRG Sbjct: 20 NGAQSQLVCSGCRNLLVYPVGATSVCCAVCNAVTSVPPPGTEMAQLVCGGCHTLLMYIRG 79 Query: 535 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 356 ATSVQCSCCHTVNLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVG S STT Sbjct: 80 ATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGTSASTT 139 Query: 355 EQKFNT 338 EQKF+T Sbjct: 140 EQKFST 145 >ref|XP_002528249.1| conserved hypothetical protein [Ricinus communis] gi|223532335|gb|EEF34134.1| conserved hypothetical protein [Ricinus communis] Length = 147 Score = 218 bits (556), Expect = 1e-54 Identities = 105/126 (83%), Positives = 110/126 (87%) Frame = -3 Query: 715 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 536 NGAQSQLVCSGCRNLLLYP GATS PGTEMAQLVCGGCHTLLMYIRG Sbjct: 22 NGAQSQLVCSGCRNLLLYPAGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 81 Query: 535 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 356 ATSVQCSCCHT+NLAMEANQVAHVNCGNCRMLLMYQYGARSVKC+VC+FVT+VGAS STT Sbjct: 82 ATSVQCSCCHTINLAMEANQVAHVNCGNCRMLLMYQYGARSVKCSVCNFVTAVGASTSTT 141 Query: 355 EQKFNT 338 EQKFN+ Sbjct: 142 EQKFNS 147 >ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatula] gi|217075072|gb|ACJ85896.1| unknown [Medicago truncatula] gi|217075520|gb|ACJ86120.1| unknown [Medicago truncatula] gi|355509677|gb|AES90819.1| Zinc finger protein LSD1 [Medicago truncatula] gi|388499772|gb|AFK37952.1| unknown [Medicago truncatula] gi|388500106|gb|AFK38119.1| unknown [Medicago truncatula] Length = 154 Score = 216 bits (549), Expect = 9e-54 Identities = 107/127 (84%), Positives = 111/127 (87%), Gaps = 1/127 (0%) Frame = -3 Query: 715 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 536 NGAQSQLVCSGCRNLL+YPVGATS PGTEMAQLVCGGCHTLLMYIRG Sbjct: 28 NGAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 87 Query: 535 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 356 ATSVQCSCCHTVNLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVGAS STT Sbjct: 88 ATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASASTT 147 Query: 355 E-QKFNT 338 E QKF+T Sbjct: 148 EPQKFST 154 >ref|XP_002281099.1| PREDICTED: protein LOL1-like [Vitis vinifera] Length = 145 Score = 215 bits (547), Expect = 1e-53 Identities = 104/125 (83%), Positives = 108/125 (86%) Frame = -3 Query: 715 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 536 NGAQSQLVCSGCRNLLLYPVGA S PGTEMAQLVCGGCHTLLMYIRG Sbjct: 20 NGAQSQLVCSGCRNLLLYPVGAKSVCCAVCNVVTAVPLPGTEMAQLVCGGCHTLLMYIRG 79 Query: 535 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCSFVTSVGASPSTT 356 ATSVQCSCCHT+NLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVC+FVTSVGAS S+T Sbjct: 80 ATSVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASTSST 139 Query: 355 EQKFN 341 E KFN Sbjct: 140 EHKFN 144