BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007073
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-l...    75   2e-20
ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [...    76   5e-20
emb|CAN61068.1| hypothetical protein VITISV_006589 [Vitis vinifera]    85   2e-19
gb|AFK43498.1| unknown [Lotus japonicus]                               69   4e-19
ref|XP_002512880.1| protein with unknown function [Ricinus commu...    69   7e-18

>ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
           gi|449522321|ref|XP_004168175.1| PREDICTED: shikimate
           kinase, chloroplastic-like [Cucumis sativus]
          Length = 307

 Score = 75.1 bits (183), Expect(3) = 2e-20
 Identities = 34/66 (51%), Positives = 51/66 (77%)
 Frame = -3

Query: 432 VGDVILNSDPSKAVAEVTELYERMRGGYATADATISFQKVASQLGYDDTDGVTIEDMAME 253
           V D+  +   S+ + ++T LY++++ GYATADA IS QK+AS+LGYDD + VT EDMAME
Sbjct: 226 VFDISTSGSYSEVLGQITSLYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAME 285

Query: 252 AVRELD 235
           A++E++
Sbjct: 286 ALKEIE 291



 Score = 35.4 bits (80), Expect(3) = 2e-20
 Identities = 12/26 (46%), Positives = 21/26 (80%)
 Frame = -2

Query: 505 SFMRHGISIWIDIPIVVLAKEVKESR 428
           + +RHGI++WID+P+ ++A+E  E R
Sbjct: 196 ALLRHGITLWIDLPLQMIAEEFAEDR 221



 Score = 33.5 bits (75), Expect(3) = 2e-20
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 236 IEKLARVKKMMEAAARPF 183
           IEKL RVKKM+EAAA+PF
Sbjct: 290 IEKLTRVKKMIEAAAKPF 307


>ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
           gi|296082301|emb|CBI21306.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score = 75.9 bits (185), Expect(3) = 5e-20
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = -3

Query: 402 SKAVAEVTELYERMRGGYATADATISFQKVASQLGYDDTDGVTIEDMAMEAVREL 238
           ++  A++  +YE M+GGYATADA++S QKVASQLGYDD D VT EDMAME ++E+
Sbjct: 234 NQVFAQLAVVYEEMKGGYATADASVSLQKVASQLGYDDLDAVTTEDMAMEVLKEI 288



 Score = 35.8 bits (81), Expect(3) = 5e-20
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = -2

Query: 505 SFMRHGISIWIDIPIVVLAKEVKE 434
           + +RHGISIWID+PI ++AK + E
Sbjct: 189 ALLRHGISIWIDVPIEMVAKNMIE 212



 Score = 30.8 bits (68), Expect(3) = 5e-20
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -1

Query: 236 IEKLARVKKMMEAAARPF 183
           I++L R+KKMME AARPF
Sbjct: 288 IQRLTRLKKMMEEAARPF 305


>emb|CAN61068.1| hypothetical protein VITISV_006589 [Vitis vinifera]
          Length = 460

 Score = 84.7 bits (208), Expect(2) = 2e-19
 Identities = 43/81 (53%), Positives = 56/81 (69%)
 Frame = -3

Query: 402 SKAVAEVTELYERMRGGYATADATISFQKVASQLGYDDTDGVTIEDMAMEAVRELD*ETG 223
           ++  A++  +YE M+GGYATADA++S QKVASQLGYDD D VT EDMA     + D +T 
Sbjct: 297 NQVFAQLAVVYEEMKGGYATADASVSLQKVASQLGYDDLDAVTTEDMATGG-SQRDTKTD 355

Query: 222 KSKEDDGSRCKTILTTAKLFK 160
           ++KEDDG  CK IL    + K
Sbjct: 356 QTKEDDGRGCKAILVDKPIVK 376



 Score = 35.8 bits (81), Expect(2) = 2e-19
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = -2

Query: 505 SFMRHGISIWIDIPIVVLAKEVKE 434
           + +RHGISIWID+PI ++AK + E
Sbjct: 252 ALLRHGISIWIDVPIEMVAKNMIE 275


>gb|AFK43498.1| unknown [Lotus japonicus]
          Length = 280

 Score = 69.3 bits (168), Expect(3) = 4e-19
 Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
 Frame = -3

Query: 426 DVILNSDPSKAVAEVTEL---YERMRGGYATADATISFQKVASQLGYDDTDGVTIEDMAM 256
           DVI +     A  EV EL   Y + + GYATADA IS QKVAS+LGYD+ D +T EDMA+
Sbjct: 198 DVIEDQSQFAAFEEVNELGALYNKYKDGYATADAIISLQKVASRLGYDNLDDITKEDMAL 257

Query: 255 EAVRELD 235
           EA+RE++
Sbjct: 258 EALREIE 264



 Score = 35.8 bits (81), Expect(3) = 4e-19
 Identities = 12/26 (46%), Positives = 22/26 (84%)
 Frame = -2

Query: 505 SFMRHGISIWIDIPIVVLAKEVKESR 428
           + +RHGIS+WID+P+ ++A++V E +
Sbjct: 178 ALLRHGISLWIDVPLDIVARDVIEDQ 203



 Score = 34.3 bits (77), Expect(3) = 4e-19
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -1

Query: 236 IEKLARVKKMMEAAARPF 183
           IEKL RVKKMME AARPF
Sbjct: 263 IEKLTRVKKMMEEAARPF 280


>ref|XP_002512880.1| protein with unknown function [Ricinus communis]
           gi|223547891|gb|EEF49383.1| protein with unknown
           function [Ricinus communis]
          Length = 292

 Score = 68.9 bits (167), Expect(3) = 7e-18
 Identities = 33/61 (54%), Positives = 43/61 (70%)
 Frame = -3

Query: 417 LNSDPSKAVAEVTELYERMRGGYATADATISFQKVASQLGYDDTDGVTIEDMAMEAVREL 238
           L+   S+ + E+   +E MRGGYATADATIS QKVA  LGYD  D VT EDM +E ++E+
Sbjct: 216 LSGADSEELTELIATFEAMRGGYATADATISLQKVAVNLGYDALDSVTAEDMTLEVLKEI 275

Query: 237 D 235
           +
Sbjct: 276 E 276



 Score = 33.1 bits (74), Expect(3) = 7e-18
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = -2

Query: 505 SFMRHGISIWIDIPIVVLAKEVKE 434
           + +RHGIS+WID+P+ ++A+ + E
Sbjct: 188 ALLRHGISLWIDVPLDMVAQAMSE 211



 Score = 33.1 bits (74), Expect(3) = 7e-18
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -1

Query: 236 IEKLARVKKMMEAAARPF 183
           IEKL RVKKM+E AARPF
Sbjct: 275 IEKLTRVKKMLEEAARPF 292