BLASTX nr result
ID: Coptis23_contig00007071
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00007071
(1677 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003527732.1| PREDICTED: uncharacterized protein LOC100797... 120 4e-62
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252... 194 2e-56
emb|CBI19420.3| unnamed protein product [Vitis vinifera] 175 1e-50
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2... 140 1e-39
ref|XP_002510115.1| transcription initiation factor, putative [R... 138 1e-38
>ref|XP_003527732.1| PREDICTED: uncharacterized protein LOC100797127 [Glycine max]
Length = 933
Score = 120 bits (301), Expect(3) = 4e-62
Identities = 98/353 (27%), Positives = 159/353 (45%), Gaps = 55/353 (15%)
Frame = +3
Query: 705 VKTPSLSP--LQFTDXXXXXXXXXKGQKTPSDPNQVLTPKVEASSNSSFPTPESNSQKFR 878
V+TP+++ +F D + +D + + V+ + ++PT + N++K R
Sbjct: 271 VRTPNVNSGATKFNDPHALAHLHQRSMNAAADQSNNTSSAVQVKNEPTYPTMDINAKKSR 330
Query: 879 ESEHSSDSQRMHVSKVSSSSVGTNNQERDLPTVPPRGPNKQHQQHLHLPPTSYPMYGPNT 1058
E + +SQ ++++ SSS +QE + ++ +G NK+ QQHLH P YG +
Sbjct: 331 ELDVQVESQGAQLNQLPSSSSNAVSQETERSSLHLQGLNKEQQQHLHFPSA----YGNSG 386
Query: 1059 SNYHVHPYSGQSIGASSTPLIPQTQDSQVRQVLHQGSAPAQSGGTTQPMSSISMTNYEIQ 1238
NY +P+SG S +S++ + PQ DS +RQ+ HQ +P Q GG+TQ + I +T + Q
Sbjct: 387 GNY--NPFSG-STSSSTSSIRPQPFDSHMRQIPHQSISPNQLGGSTQGL--IGLTKLDQQ 441
Query: 1239 NSSNDPKRLHGGSMPHLTTNSTMQHNPVSWQSSMGKD----------------------- 1349
NS NDPKR+ GG + + N+T Q SWQ S K+
Sbjct: 442 NSFNDPKRMPGGFVSPVANNTTSQQTSNSWQPSANKEQSSGSFSSVPYVKKEPNDLSTEQ 501
Query: 1350 -----LKXXXXXXXXXXGRADLGNPVPAGT----------------NSISSSMPM----- 1451
L + + G+ GT ++ SS +P+
Sbjct: 502 QHRHNLSKLHGLHSVNSVQNEQGSSANQGTLKEEFSRGFPASTSMPHTTSSLLPLNSASP 561
Query: 1452 ---QLDHLQVPSTTTSLGTGTI-MKTPPKKITIGQKKSFDALGTTSTQPRKRK 1598
QLD S T I +TP KK + GQKK +ALG++ P K++
Sbjct: 562 SVSQLDPSATLSPQIPSNTSVINARTPLKKPSPGQKKPIEALGSSPPPPSKKQ 614
Score = 114 bits (286), Expect(3) = 4e-62
Identities = 66/172 (38%), Positives = 95/172 (55%), Gaps = 4/172 (2%)
Frame = +1
Query: 121 AAKWSGEGTESAARQQKDDQLERRTEPNPHQLSKQSGVQVSEQNPVHYGGQDGTRQPENQ 300
AA S+ +Q +D+ + T PHQ S+ + Q SE++PV T P ++
Sbjct: 106 AASQDANNLPSSQKQSQDESAQGHTAQAPHQNSQTNVTQNSEKDPVFNHEAVNTHNPNHE 165
Query: 301 QQFPNILKTNSPQAQTAESES----RSKQVSFGVMLPVLLPLLEKDRAMQLQALYFKLRK 468
Q+ + + ++ QA E R+KQV F ++LP+L+P L KDRAMQLQ L+ KL+K
Sbjct: 166 SQYAKLQQMSNQQATVKEQPGSQVDRNKQVPFAMLLPMLIPQLPKDRAMQLQTLFNKLKK 225
Query: 469 NEIHKDGFVRHMRNIVGDQMLRQAVHKIQVQQDQTKAQADQNSQTTRQDPTN 624
+E+ KD FVR M+ IVGDQMLR A+ K+Q+Q A Q R N
Sbjct: 226 DEMPKDQFVRLMKGIVGDQMLRLALTKVQLQTRSNPAPTGQQHPHVRTPNVN 277
Score = 52.8 bits (125), Expect(3) = 4e-62
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 1586 KEEEEQLFSGPKDEGRTSEATRRVVQEEEE 1675
+EEEEQLFSGPK++ R SEA+RRVVQEEEE
Sbjct: 640 REEEEQLFSGPKEDSRASEASRRVVQEEEE 669
>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
Length = 922
Score = 194 bits (494), Expect(2) = 2e-56
Identities = 121/326 (37%), Positives = 172/326 (52%), Gaps = 53/326 (16%)
Frame = +3
Query: 780 KTPSDPNQVLTPKVEASSNSSFPTPESNSQKFRESEHSSDSQRMHVSKVSSSSVGTNNQE 959
KTPS+ + + + ++ ++SS+PT E+NSQK RE E SDS M S++SSSS+ + QE
Sbjct: 281 KTPSNSSHMPSSAMKVQTDSSYPTTETNSQKPREMERQSDSHGMQGSQMSSSSLSSAKQE 340
Query: 960 RDLPTVPPRGPNKQHQQHLHLPPTSYPMYGPNTSNYHVHPYSGQSIGASSTPLIPQTQDS 1139
R+ +P +GPNKQ QQHLH T + MYG NY H Y+G ++ S+T Q DS
Sbjct: 341 REHSVMPMQGPNKQQQQHLHFSQTPFTMYGSAGGNY--HSYTGTNVNTSATSTKQQPHDS 398
Query: 1140 QVRQV-LHQGSAPAQSGGTTQPMSSISMTNYEIQNSSNDPKRLHGGSMPHLTTNSTMQHN 1316
Q+RQV LHQ Q GGT+Q M+ +S+ +E Q+S NDPKR+ GGS+PH + +ST+Q +
Sbjct: 399 QMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLPHPSNSSTLQQS 458
Query: 1317 PVSWQSSMGKD------------------------LKXXXXXXXXXXGRADLGNPVPA-- 1418
V WQSS K+ L + + GN +P
Sbjct: 459 SVPWQSSTNKEQISSMAYVKQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAIPGIL 518
Query: 1419 ---------------------GTNSISSSMPMQLD-----HLQVPSTTTSLGTGTIMKTP 1520
NS+SSSM LD ++PS T+ +G T +TP
Sbjct: 519 KDESLEKQASRIGFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGINT--RTP 576
Query: 1521 PKKITIGQKKSFDALGTTSTQPRKRK 1598
PKK +IGQKK +ALG++ P K++
Sbjct: 577 PKKPSIGQKKPLEALGSSPPLPSKKQ 602
Score = 52.8 bits (125), Expect(2) = 2e-56
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 1586 KEEEEQLFSGPKDEGRTSEATRRVVQEEEE 1675
+EEEEQLFSGPK++ R SEA+RRVVQEEEE
Sbjct: 628 REEEEQLFSGPKEDSRVSEASRRVVQEEEE 657
Score = 125 bits (315), Expect(2) = 1e-26
Identities = 68/165 (41%), Positives = 99/165 (60%), Gaps = 7/165 (4%)
Frame = +1
Query: 160 RQQKDDQLERRTEPNPHQLSKQSGVQVSEQNPVHYGGQDGTRQPENQQQFPNILKTNSPQ 339
+Q +DD + ++EPNP Q S+ G+Q+SE+N V D P+ Q QFP + K N+ Q
Sbjct: 124 KQSQDDPQQLQSEPNPIQFSQAPGIQISEKNSVQIPEPDRIHNPDKQHQFPELQKINNQQ 183
Query: 340 A----QTAESESRSKQVSFGVMLPVLLPLLEKDRAMQLQALYFKLRKNEIHKDGFVRHMR 507
Q + S +++K + FG++LP ++P L+KDRA+QL+ LY KL+KNEI K FVR MR
Sbjct: 184 GIATEQASNSGNQNKHIPFGMLLPSIIPHLDKDRALQLRTLYAKLKKNEIPKLAFVRLMR 243
Query: 508 NIVGDQMLRQAVHKIQVQQDQTKAQADQNSQTTRQ---DPTNLRH 633
IVGDQML+ AV Q ++ Q + +Q P+N H
Sbjct: 244 GIVGDQMLKLAVDAWNYQTGPSQFQLQSQASALQQHLKTPSNSSH 288
Score = 21.9 bits (45), Expect(2) = 1e-26
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 8 ENVCVQNKEEEVKNSQNQGQTSSEVDMMQQGSGSEIQVLQSGQV 139
ENV Q +Q QTSS+ + S E++ LQ ++
Sbjct: 47 ENVLSQGSNHTSSQLFSQWQTSSQDENTDSQSQQELKSLQQQEL 90
>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 175 bits (444), Expect(2) = 1e-50
Identities = 112/304 (36%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Frame = +3
Query: 705 VKTPSLSPLQFTDXXXXXXXXXKGQKTPSDPNQVLTPKVEASSNSSFPTPESNSQKFRES 884
+KTPS QF+D KGQ TP+D + + + ++ ++SS+PT E+NSQK RE
Sbjct: 281 LKTPSSIGSQFSDPHSFSQLHQKGQSTPADSSHMPSSAMKVQTDSSYPTTETNSQKPREM 340
Query: 885 EHSSDSQRMHVSKVSSSSVGTNNQERDLPTVPPRGPNKQHQQHLHLPPTSYPMYGPNTSN 1064
E SDS M S++SSSS+ + QER+ T + MYG N
Sbjct: 341 ERQSDSHGMQGSQMSSSSLSSAKQERE-------------------HSTPFTMYGSAGGN 381
Query: 1065 YHVHPYSGQSIGASSTPLIPQTQDSQVRQV-LHQGSAPAQSGGTTQPMSSISMTNYEIQN 1241
Y H Y+G ++ S+T Q DSQ+RQV LHQ Q GGT+Q M+ +S+ +E Q+
Sbjct: 382 Y--HSYTGTNVNTSATSTKQQPHDSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQS 439
Query: 1242 SSNDPKRLHGGSMPHLTTNSTMQHNPVSWQSSMGKDLKXXXXXXXXXXGRADLGNPVPAG 1421
S NDPKR+ GGS+PH + +ST+Q + +S + G + + +P
Sbjct: 440 SVNDPKRVQGGSLPHPSNSSTLQQSSQQQKSQLSTPQNESLEKQASRIGFSSSMSMLP-- 497
Query: 1422 TNSISSSMPMQLD-----HLQVPSTTTSLGTGTIMKTPPKKITIGQKKSFDALGTTSTQP 1586
NS+SSSM LD ++PS T+ +G T +TPPKK +IGQKK +ALG++ P
Sbjct: 498 PNSVSSSMGTHLDPNVTLGSRIPSVTSPVGINT--RTPPKKPSIGQKKPLEALGSSPPLP 555
Query: 1587 RKRK 1598
K++
Sbjct: 556 SKKQ 559
Score = 52.8 bits (125), Expect(2) = 1e-50
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 1586 KEEEEQLFSGPKDEGRTSEATRRVVQEEEE 1675
+EEEEQLFSGPK++ R SEA+RRVVQEEEE
Sbjct: 585 REEEEQLFSGPKEDSRVSEASRRVVQEEEE 614
Score = 125 bits (315), Expect(2) = 1e-26
Identities = 64/136 (47%), Positives = 91/136 (66%), Gaps = 4/136 (2%)
Frame = +1
Query: 160 RQQKDDQLERRTEPNPHQLSKQSGVQVSEQNPVHYGGQDGTRQPENQQQFPNILKTNSPQ 339
+Q +DD + ++EPNP Q S+ G+Q+SE+N V D P+ Q QFP + K N+ Q
Sbjct: 124 KQSQDDPQQLQSEPNPIQFSQAPGIQISEKNSVQIPEPDRIHNPDKQHQFPELQKINNQQ 183
Query: 340 A----QTAESESRSKQVSFGVMLPVLLPLLEKDRAMQLQALYFKLRKNEIHKDGFVRHMR 507
Q + S +++K + FG++LP ++P L+KDRA+QL+ LY KL+KNEI K FVR MR
Sbjct: 184 GIATEQASNSGNQNKHIPFGMLLPSIIPHLDKDRALQLRTLYAKLKKNEIPKLAFVRLMR 243
Query: 508 NIVGDQMLRQAVHKIQ 555
IVGDQML+ AV K+Q
Sbjct: 244 GIVGDQMLKLAVMKLQ 259
Score = 21.9 bits (45), Expect(2) = 1e-26
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 8 ENVCVQNKEEEVKNSQNQGQTSSEVDMMQQGSGSEIQVLQSGQV 139
ENV Q +Q QTSS+ + S E++ LQ ++
Sbjct: 47 ENVLSQGSNHTSSQLFSQWQTSSQDENTDSQSQQELKSLQQQEL 90
>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
predicted protein [Populus trichocarpa]
Length = 875
Score = 140 bits (354), Expect(2) = 1e-39
Identities = 98/277 (35%), Positives = 136/277 (49%), Gaps = 32/277 (11%)
Frame = +3
Query: 861 NSQKFRESEHSSDSQRMHVSKVSSSSVGTNNQERDLPTVPPRGPNKQHQQHLHLPPTSYP 1040
NSQK + E DS M S+ SS+ +NQER+ ++ +G NKQ QQH++ PPTS+P
Sbjct: 281 NSQKSKAVEWKPDSLVMQASQSHSSNASISNQERERSSISMQGQNKQ-QQHVNFPPTSFP 339
Query: 1041 MYGPNTSNYHVHPYSGQSIGASSTPLIPQTQDSQVRQVLH-QGSAPAQSGGTTQPMSSIS 1217
MYG + NYH PYSG ++ S + PQ D Q RQ+ H Q Q GG M IS
Sbjct: 340 MYGSSGGNYH--PYSGTNVSTSGPSVKPQPHDPQTRQIPHHQNLGVTQIGGPMHSM--IS 395
Query: 1218 MTNYEIQNSSNDPKRLHGGSMPHLTTNSTMQHNPVSWQ------------SSMGKDLKXX 1361
+E QNS++DP R+H GS+ H T S +Q N WQ SS+
Sbjct: 396 TPKFERQNSADDPSRVHSGSVSHYTNKSALQQNSAPWQAPSNREKSPASFSSLNYVKPGL 455
Query: 1362 XXXXXXXXGRADLGNP----------------VPAGTNSISSSMPMQLD-HLQVPSTTTS 1490
+ L +P VP NS S+ Q+D + Q S +S
Sbjct: 456 LEQAGEQQNKPQLSSPQDQSLDKQSTKIVFSTVP--PNSAPPSIATQMDPNGQAGSRISS 513
Query: 1491 LGT--GTIMKTPPKKITIGQKKSFDALGTTSTQPRKR 1595
+ + G +TPPKK ++GQKK F+ALG++ K+
Sbjct: 514 VASPAGVNARTPPKKPSVGQKKPFEALGSSPPASTKK 550
Score = 50.8 bits (120), Expect(2) = 1e-39
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +2
Query: 1586 KEEEEQLFSGPKDEGRTSEATRRVVQEEEE 1675
+EEEEQLFSGPK++ R SEA+RR VQEEEE
Sbjct: 577 REEEEQLFSGPKEDSRVSEASRRFVQEEEE 606
Score = 103 bits (258), Expect = 1e-19
Identities = 59/137 (43%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Frame = +1
Query: 160 RQQKDDQLERRTEPNPHQLSKQSGVQVSEQNPVHYGGQDGTRQPENQQQFPNILKTNSPQ 339
+ +DD + E P Q + G+Q E+NP+ D + + F N K ++ Q
Sbjct: 128 KTSQDDIKQELVEQAPLQTPQSIGMQSYEKNPIPKSEPDKMQSSDGDPHFLNFQKMSNQQ 187
Query: 340 A---QTAESESRSKQVSFGVMLPVLLPLLEKDRAMQLQALYFKLRKNEIHKDGFVRHMRN 510
A ++ SKQ+ F ++LP L P L+KDR MQLQ LY KLRKNEI KD FVR MRN
Sbjct: 188 TAGTDQAGNQKNSKQIPFAILLPALKPHLDKDREMQLQTLYNKLRKNEIAKDQFVRLMRN 247
Query: 511 IVGDQMLRQAVHKIQVQ 561
IVGDQ+LR A ++Q Q
Sbjct: 248 IVGDQVLRLAAAQLQSQ 264
>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
gi|223550816|gb|EEF52302.1| transcription initiation
factor, putative [Ricinus communis]
Length = 925
Score = 138 bits (348), Expect(2) = 1e-38
Identities = 92/313 (29%), Positives = 143/313 (45%), Gaps = 53/313 (16%)
Frame = +3
Query: 819 VEASSNSSFPTPESNSQKFRESEHSSDSQRMHVSKVSSSSVGTNNQERDLPTVPPRGPNK 998
V+ ++SS+P E N+ + R EH DS M S+ SS S T +Q+R+ ++ G +K
Sbjct: 293 VQVLADSSYPPAEGNAHRPRGVEHLPDSHGMQASQFSSPSTSTLSQDRERSSISVPGHSK 352
Query: 999 QHQQHLHLPPTSYPMYGPNTSNYHVHPYSGQSIGASSTPLIPQTQDSQVRQVLHQGSAPA 1178
Q QQHLH P S+ YG ++ +H PYSG +I S + + Q D Q+RQ+ H A
Sbjct: 353 QQQQHLHFPQNSFSTYGSSSGTHH--PYSGTNINTSGSSMKTQPHDLQMRQISHSTMAST 410
Query: 1179 QSGGTTQPMSSISMTNYEIQNSSNDPKRLHGGSMPHLTTNSTMQHNPVSWQSSMGKDLKX 1358
Q GG+T ++ + ++ +E NS +DP R+ GSM S + N + WQ+ K+
Sbjct: 411 QIGGSTPTLNMVHVSKFERPNSVSDPSRVQSGSMSQYNNKSALPQNSIPWQAPTNKEQTS 470
Query: 1359 XXXXXXXXXGRADL-------------------------GNPVPAG-------------- 1421
+ L GN VP
Sbjct: 471 PLFPSTNYVKQEPLEQATDQQQKPQLSNPQGLSAAPGEQGNAVPVNSKEDSLEKPSSKVG 530
Query: 1422 ---------TNSISSSMPMQLD-HLQV----PSTTTSLGTGTIMKTPPKKITIGQKKSFD 1559
+NS+S S+ +Q D ++Q PS S+G +TP KK++IGQKK +
Sbjct: 531 FSNPSTAVPSNSVSPSIAIQPDPNIQAGPRFPSGAASVGVNA--RTPTKKLSIGQKKPLE 588
Query: 1560 ALGTTSTQPRKRK 1598
ALG++ K++
Sbjct: 589 ALGSSPPMSSKKQ 601
Score = 49.7 bits (117), Expect(2) = 1e-38
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +2
Query: 1586 KEEEEQLFSGPKDEGRTSEATRRVVQEEEE 1675
+EEEEQLFSG K++ R SEA+RRVVQEEEE
Sbjct: 627 REEEEQLFSGSKEDSRVSEASRRVVQEEEE 656
Score = 92.0 bits (227), Expect = 4e-16
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 4/145 (2%)
Frame = +1
Query: 160 RQQKDDQLERRTEPNPHQLSKQSGVQVSEQNPVHYGGQDGTRQPENQQQFPNILKTNSPQ 339
+Q +D + + E P Q + Q+SE N + D + P+ + Q+ N+ + Q
Sbjct: 125 KQPQDTVQQSQAEQAPVQTPRTIRTQISETNTMPKSEPDKMQIPDTESQYMNVQNMGNQQ 184
Query: 340 AQTAESESRSKQ----VSFGVMLPVLLPLLEKDRAMQLQALYFKLRKNEIHKDGFVRHMR 507
E S K + F ++LP L P L+KDR MQL+ L+ KLR+N++ K+ FVR MR
Sbjct: 185 TMGPEQPSNPKNQFKPIPFMLLLPTLKPHLDKDRDMQLEILFNKLRRNQVPKEQFVRLMR 244
Query: 508 NIVGDQMLRQAVHKIQVQQDQTKAQ 582
IVGDQ+LR AV + Q QQ ++Q
Sbjct: 245 GIVGDQVLRLAVEQWQSQQGSRQSQ 269