BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007047
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84185.1| unknown [Medicago truncatula] gi|388516619|gb|AFK...   115   2e-23
ref|XP_003625462.1| Photosystem I reaction center subunit IV A [...   115   2e-23
ref|XP_002266424.1| PREDICTED: photosystem I reaction center sub...   114   2e-23
ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Popu...   113   7e-23
emb|CAD29821.2| putative photosystem I reaction centre subunit I...   110   4e-22

>gb|ACJ84185.1| unknown [Medicago truncatula] gi|388516619|gb|AFK46371.1| unknown
           [Medicago truncatula]
          Length = 138

 Score =  115 bits (287), Expect = 2e-23
 Identities = 71/141 (50%), Positives = 79/141 (56%), Gaps = 4/141 (2%)
 Frame = +1

Query: 262 MATCNMASAASGFVMXXXXXXXXXXXXX---RINLVFSPTKFN-NSRLXXXXXXXXXXXX 429
           MA+CNMASAASGFV+                R+N+V  PT  N NSRL            
Sbjct: 1   MASCNMASAASGFVLSPNNVSCNTNTNLLVSRMNMVMYPTTRNTNSRLVVRASEEAAATP 60

Query: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXILRKESYWFNGIGSVVVVDQDPSSRYPVVVRF 609
                                       +LRKESYWFNGIGSVV VDQDP++RYPVVVRF
Sbjct: 61  TVEGEAAPKTKPPPIGPKRGAKVK----VLRKESYWFNGIGSVVAVDQDPNTRYPVVVRF 116

Query: 610 NKVNYANVSTNNYALDEIQEV 672
           NKVNYANVSTNNYALDEI+EV
Sbjct: 117 NKVNYANVSTNNYALDEIEEV 137


>ref|XP_003625462.1| Photosystem I reaction center subunit IV A [Medicago truncatula]
           gi|355500477|gb|AES81680.1| Photosystem I reaction
           center subunit IV A [Medicago truncatula]
           gi|388502410|gb|AFK39271.1| unknown [Medicago
           truncatula]
          Length = 138

 Score =  115 bits (287), Expect = 2e-23
 Identities = 71/141 (50%), Positives = 79/141 (56%), Gaps = 4/141 (2%)
 Frame = +1

Query: 262 MATCNMASAASGFVMXXXXXXXXXXXXX---RINLVFSPTKFN-NSRLXXXXXXXXXXXX 429
           MA+CNMASAASGFV+                R+N+V  PT  N NSRL            
Sbjct: 1   MASCNMASAASGFVLSPNNVSGNTNTNLLVSRMNMVMYPTTRNTNSRLVVRASEEAAATP 60

Query: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXILRKESYWFNGIGSVVVVDQDPSSRYPVVVRF 609
                                       +LRKESYWFNGIGSVV VDQDP++RYPVVVRF
Sbjct: 61  TVEGEAAPKTKPPPIGPKRGAKVK----VLRKESYWFNGIGSVVAVDQDPNTRYPVVVRF 116

Query: 610 NKVNYANVSTNNYALDEIQEV 672
           NKVNYANVSTNNYALDEI+EV
Sbjct: 117 NKVNYANVSTNNYALDEIEEV 137


>ref|XP_002266424.1| PREDICTED: photosystem I reaction center subunit IV A,
           chloroplastic-like [Vitis vinifera]
          Length = 143

 Score =  114 bits (286), Expect = 2e-23
 Identities = 68/142 (47%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
 Frame = +1

Query: 262 MATCNMASAASGFVMXXXXXXXXXXXXXRINLVFSPTKFNNSRLXXXXXXXXXXXXXXXX 441
           MA+C+MASAASGFV+                ++FSP    NSRL                
Sbjct: 1   MASCSMASAASGFVLTPTPNSTTKPTSTPSMVIFSPKNHRNSRLVVRASEGGPPPPPPPP 60

Query: 442 XXXXXXXXXXXXXXXXXXXXXXXX-----ILRKESYWFNGIGSVVVVDQDPSSRYPVVVR 606
                                        ILRKESYW+NGIGSVV VDQDP +RYPVVVR
Sbjct: 61  PPAPAPVAEGGAPPPKPPPIGPKRGTKVKILRKESYWYNGIGSVVAVDQDPKTRYPVVVR 120

Query: 607 FNKVNYANVSTNNYALDEIQEV 672
           FNKVNYANVSTNNYALDEIQEV
Sbjct: 121 FNKVNYANVSTNNYALDEIQEV 142


>ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Populus trichocarpa]
           gi|222843558|gb|EEE81105.1| hypothetical protein
           POPTRDRAFT_711610 [Populus trichocarpa]
          Length = 140

 Score =  113 bits (282), Expect = 7e-23
 Identities = 70/140 (50%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
 Frame = +1

Query: 262 MATCNMASAASGFVMXXXXXXXXXXXXXRINLVFSPTKFNN---SRLXXXXXXXXXXXXX 432
           MA+CNMASAASGF +                L FS +K NN   SRL             
Sbjct: 1   MASCNMASAASGFALAPTVATNTNSTSKPTMLFFS-SKNNNKNYSRLVVRSAEEGASPPA 59

Query: 433 XXXXXXXXXXXXXXXXXXXXXXXXXXXILRKESYWFNGIGSVVVVDQDPSSRYPVVVRFN 612
                                      ILRKESYWFNG+GSVV VDQDP SRYPVVVRFN
Sbjct: 60  ATTEPAVAEAPKPKPPPIGPKRGTKVKILRKESYWFNGVGSVVAVDQDPRSRYPVVVRFN 119

Query: 613 KVNYANVSTNNYALDEIQEV 672
           KVNYANVSTNNYALDEI+EV
Sbjct: 120 KVNYANVSTNNYALDEIEEV 139


>emb|CAD29821.2| putative photosystem I reaction centre subunit IV [Populus x
           canadensis]
          Length = 140

 Score =  110 bits (275), Expect = 4e-22
 Identities = 69/140 (49%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
 Frame = +1

Query: 262 MATCNMASAASGFVMXXXXXXXXXXXXXRINLVFSPTKFNN---SRLXXXXXXXXXXXXX 432
           MA+CNMASAASGF +                L FS +K NN   SRL             
Sbjct: 1   MASCNMASAASGFALTPAVATNTNSTSKPTMLFFS-SKNNNKNYSRLVVRSAEEGASPPA 59

Query: 433 XXXXXXXXXXXXXXXXXXXXXXXXXXXILRKESYWFNGIGSVVVVDQDPSSRYPVVVRFN 612
                                      ILRKESYWFNG GSV  VDQDP SRYPVVVRFN
Sbjct: 60  ATTEPAVAEAPKPKPPPIGPKRGTKVKILRKESYWFNGFGSVAAVDQDPRSRYPVVVRFN 119

Query: 613 KVNYANVSTNNYALDEIQEV 672
           KVNYANVSTNNYALDEI+EV
Sbjct: 120 KVNYANVSTNNYALDEIEEV 139