BLASTX nr result

ID: Coptis23_contig00007044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007044
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280252.2| PREDICTED: GTPase-activating protein gyp7-li...   457   e-126
ref|XP_002280223.1| PREDICTED: GTPase-activating protein gyp7-li...   457   e-126
emb|CAN71141.1| hypothetical protein VITISV_025995 [Vitis vinifera]   457   e-126
ref|XP_002321378.1| predicted protein [Populus trichocarpa] gi|2...   446   e-123
ref|XP_002317818.1| predicted protein [Populus trichocarpa] gi|2...   445   e-122

>ref|XP_002280252.2| PREDICTED: GTPase-activating protein gyp7-like isoform 3 [Vitis
            vinifera]
          Length = 591

 Score =  457 bits (1176), Expect = e-126
 Identities = 220/262 (83%), Positives = 238/262 (90%)
 Frame = -2

Query: 1032 FDTWQRIIRLDAVRANAEWVVYXXXXXXXXXXXXXXXXXAVGLKDYDHLEPCRILHAARL 853
            F TWQRIIRLDAVRANAEW++Y                 +VGLKDYDHLEPCRI HAARL
Sbjct: 330  FATWQRIIRLDAVRANAEWIIYSPSQAAVSEIKARRFAESVGLKDYDHLEPCRIFHAARL 389

Query: 852  VAILEAYALHDPEIGYCQGMSDLLSPIIAVMEEDHEAFWCFVGFMRKARHNFRLDEVGIR 673
            VAILEAYAL+D EIGYCQGMSDLLSPII+VMEEDH+AFWCFVG+M+KARHNFRLDEVGIR
Sbjct: 390  VAILEAYALYDSEIGYCQGMSDLLSPIISVMEEDHDAFWCFVGYMKKARHNFRLDEVGIR 449

Query: 672  RQLNIVSKIIKTKDSHLYKHLVKLQAEDCFFVYRMVVVLFRRELTFEQTVCMWEVMWADQ 493
            RQL+IVSKIIK KDSHLY+HL KLQAEDCFFVYRMVVVLFRREL+FEQT+C+WEVMWADQ
Sbjct: 450  RQLSIVSKIIKCKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQ 509

Query: 492  AAIRAGIGKSAWGRIRLRAPPTEDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAG 313
            AA+RAGI KS WGRIRLRAPPT+DLLLYAIAACVLQRRKLIIEKYSSMDEI+RECNSMAG
Sbjct: 510  AAVRAGIAKSTWGRIRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIIRECNSMAG 569

Query: 312  HLDVWKLLDDAHDLVVTLHEKM 247
            HLDVWKLLDDAHDLVVTLH+K+
Sbjct: 570  HLDVWKLLDDAHDLVVTLHDKV 591


>ref|XP_002280223.1| PREDICTED: GTPase-activating protein gyp7-like isoform 1 [Vitis
            vinifera]
          Length = 554

 Score =  457 bits (1176), Expect = e-126
 Identities = 220/262 (83%), Positives = 238/262 (90%)
 Frame = -2

Query: 1032 FDTWQRIIRLDAVRANAEWVVYXXXXXXXXXXXXXXXXXAVGLKDYDHLEPCRILHAARL 853
            F TWQRIIRLDAVRANAEW++Y                 +VGLKDYDHLEPCRI HAARL
Sbjct: 293  FATWQRIIRLDAVRANAEWIIYSPSQAAVSEIKARRFAESVGLKDYDHLEPCRIFHAARL 352

Query: 852  VAILEAYALHDPEIGYCQGMSDLLSPIIAVMEEDHEAFWCFVGFMRKARHNFRLDEVGIR 673
            VAILEAYAL+D EIGYCQGMSDLLSPII+VMEEDH+AFWCFVG+M+KARHNFRLDEVGIR
Sbjct: 353  VAILEAYALYDSEIGYCQGMSDLLSPIISVMEEDHDAFWCFVGYMKKARHNFRLDEVGIR 412

Query: 672  RQLNIVSKIIKTKDSHLYKHLVKLQAEDCFFVYRMVVVLFRRELTFEQTVCMWEVMWADQ 493
            RQL+IVSKIIK KDSHLY+HL KLQAEDCFFVYRMVVVLFRREL+FEQT+C+WEVMWADQ
Sbjct: 413  RQLSIVSKIIKCKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQ 472

Query: 492  AAIRAGIGKSAWGRIRLRAPPTEDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAG 313
            AA+RAGI KS WGRIRLRAPPT+DLLLYAIAACVLQRRKLIIEKYSSMDEI+RECNSMAG
Sbjct: 473  AAVRAGIAKSTWGRIRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIIRECNSMAG 532

Query: 312  HLDVWKLLDDAHDLVVTLHEKM 247
            HLDVWKLLDDAHDLVVTLH+K+
Sbjct: 533  HLDVWKLLDDAHDLVVTLHDKV 554


>emb|CAN71141.1| hypothetical protein VITISV_025995 [Vitis vinifera]
          Length = 266

 Score =  457 bits (1176), Expect = e-126
 Identities = 220/262 (83%), Positives = 238/262 (90%)
 Frame = -2

Query: 1032 FDTWQRIIRLDAVRANAEWVVYXXXXXXXXXXXXXXXXXAVGLKDYDHLEPCRILHAARL 853
            F TWQRIIRLDAVRANAEW++Y                 +VGLKDYDHLEPCRI HAARL
Sbjct: 5    FATWQRIIRLDAVRANAEWIIYSPSQAAVSEIKARRFAESVGLKDYDHLEPCRIFHAARL 64

Query: 852  VAILEAYALHDPEIGYCQGMSDLLSPIIAVMEEDHEAFWCFVGFMRKARHNFRLDEVGIR 673
            VAILEAYAL+D EIGYCQGMSDLLSPII+VMEEDH+AFWCFVG+M+KARHNFRLDEVGIR
Sbjct: 65   VAILEAYALYDSEIGYCQGMSDLLSPIISVMEEDHDAFWCFVGYMKKARHNFRLDEVGIR 124

Query: 672  RQLNIVSKIIKTKDSHLYKHLVKLQAEDCFFVYRMVVVLFRRELTFEQTVCMWEVMWADQ 493
            RQL+IVSKIIK KDSHLY+HL KLQAEDCFFVYRMVVVLFRREL+FEQT+C+WEVMWADQ
Sbjct: 125  RQLSIVSKIIKCKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQ 184

Query: 492  AAIRAGIGKSAWGRIRLRAPPTEDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAG 313
            AA+RAGI KS WGRIRLRAPPT+DLLLYAIAACVLQRRKLIIEKYSSMDEI+RECNSMAG
Sbjct: 185  AAVRAGIAKSTWGRIRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIIRECNSMAG 244

Query: 312  HLDVWKLLDDAHDLVVTLHEKM 247
            HLDVWKLLDDAHDLVVTLH+K+
Sbjct: 245  HLDVWKLLDDAHDLVVTLHDKV 266


>ref|XP_002321378.1| predicted protein [Populus trichocarpa] gi|222868374|gb|EEF05505.1|
            predicted protein [Populus trichocarpa]
          Length = 424

 Score =  446 bits (1148), Expect = e-123
 Identities = 218/262 (83%), Positives = 234/262 (89%)
 Frame = -2

Query: 1032 FDTWQRIIRLDAVRANAEWVVYXXXXXXXXXXXXXXXXXAVGLKDYDHLEPCRILHAARL 853
            F TWQRIIR+DAVRANAEW+ Y                 AVGLKDYD LEPCRI HAARL
Sbjct: 158  FATWQRIIRVDAVRANAEWIPYSPSQATVSELRARHAADAVGLKDYDSLEPCRIFHAARL 217

Query: 852  VAILEAYALHDPEIGYCQGMSDLLSPIIAVMEEDHEAFWCFVGFMRKARHNFRLDEVGIR 673
            VAILEAYA++DPEIGYCQGMSDLLSPIIAV+ EDHEAFWCFVGFMRKARHNFRLDEVGIR
Sbjct: 218  VAILEAYAVYDPEIGYCQGMSDLLSPIIAVVTEDHEAFWCFVGFMRKARHNFRLDEVGIR 277

Query: 672  RQLNIVSKIIKTKDSHLYKHLVKLQAEDCFFVYRMVVVLFRRELTFEQTVCMWEVMWADQ 493
            RQL+IVSKIIK KDSHLY+HL KLQAEDCFFVYRMVVVLFRRELTFEQT+C+WEVMWADQ
Sbjct: 278  RQLSIVSKIIKCKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTICLWEVMWADQ 337

Query: 492  AAIRAGIGKSAWGRIRLRAPPTEDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAG 313
            AAIRAGIGKSAW R+R RAPPTEDLLLYAIAA VLQ+RKLIIEKYSSMDEI+RECNSM+G
Sbjct: 338  AAIRAGIGKSAWSRVRQRAPPTEDLLLYAIAASVLQKRKLIIEKYSSMDEILRECNSMSG 397

Query: 312  HLDVWKLLDDAHDLVVTLHEKM 247
            HLDVWKLLDDAH+LVV LH+K+
Sbjct: 398  HLDVWKLLDDAHNLVVNLHDKI 419


>ref|XP_002317818.1| predicted protein [Populus trichocarpa] gi|222858491|gb|EEE96038.1|
            predicted protein [Populus trichocarpa]
          Length = 431

 Score =  445 bits (1145), Expect = e-122
 Identities = 217/262 (82%), Positives = 233/262 (88%)
 Frame = -2

Query: 1032 FDTWQRIIRLDAVRANAEWVVYXXXXXXXXXXXXXXXXXAVGLKDYDHLEPCRILHAARL 853
            F TWQRIIR+DAVRAN+EW+ Y                 AVGLKDYDHLEPCR+ HAARL
Sbjct: 166  FATWQRIIRVDAVRANSEWIPYSPSQATVSELRACRAAEAVGLKDYDHLEPCRVFHAARL 225

Query: 852  VAILEAYALHDPEIGYCQGMSDLLSPIIAVMEEDHEAFWCFVGFMRKARHNFRLDEVGIR 673
            VAILEAYA++DPEIGYCQGMSDLLSPIIAV+ EDHEAFWCFVGFMRKARHNFRLDEVGIR
Sbjct: 226  VAILEAYAVYDPEIGYCQGMSDLLSPIIAVVTEDHEAFWCFVGFMRKARHNFRLDEVGIR 285

Query: 672  RQLNIVSKIIKTKDSHLYKHLVKLQAEDCFFVYRMVVVLFRRELTFEQTVCMWEVMWADQ 493
            RQLNIVSKIIK KDSHLY+HL KLQAEDCFFVYRMVVVLFRRELTFEQT+C+WEVMWADQ
Sbjct: 286  RQLNIVSKIIKCKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTICLWEVMWADQ 345

Query: 492  AAIRAGIGKSAWGRIRLRAPPTEDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAG 313
            AAIRAGIGKSAW RIR RAPPTEDLLLYAIAA VLQ+RKLIIEKYSS DEI+RECNSM+G
Sbjct: 346  AAIRAGIGKSAWSRIRQRAPPTEDLLLYAIAASVLQKRKLIIEKYSSTDEILRECNSMSG 405

Query: 312  HLDVWKLLDDAHDLVVTLHEKM 247
             LDVWKLLDDAH+LVV LH+K+
Sbjct: 406  QLDVWKLLDDAHNLVVNLHDKI 427


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