BLASTX nr result

ID: Coptis23_contig00007035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007035
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305712.1| predicted protein [Populus trichocarpa] gi|2...   128   1e-34
ref|XP_002317384.1| predicted protein [Populus trichocarpa] gi|1...   128   1e-34
gb|ABK93213.1| unknown [Populus trichocarpa] gi|118485561|gb|ABK...   128   1e-34
ref|XP_002337225.1| predicted protein [Populus trichocarpa] gi|2...   128   1e-34
ref|XP_002338831.1| predicted protein [Populus trichocarpa] gi|2...   128   1e-34

>ref|XP_002305712.1| predicted protein [Populus trichocarpa]
           gi|224079000|ref|XP_002305713.1| predicted protein
           [Populus trichocarpa] gi|224079007|ref|XP_002305715.1|
           predicted protein [Populus trichocarpa]
           gi|118481545|gb|ABK92715.1| unknown [Populus
           trichocarpa] gi|222848676|gb|EEE86223.1| predicted
           protein [Populus trichocarpa]
           gi|222848677|gb|EEE86224.1| predicted protein [Populus
           trichocarpa] gi|222848679|gb|EEE86226.1| predicted
           protein [Populus trichocarpa]
          Length = 178

 Score =  128 bits (322), Expect(2) = 1e-34
 Identities = 61/65 (93%), Positives = 61/65 (93%)
 Frame = +2

Query: 2   NMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHKKDIK 181
           NMYKEYRDTTLNG VEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFH   IK
Sbjct: 91  NMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIK 150

Query: 182 FPLVF 196
           FPLVF
Sbjct: 151 FPLVF 155



 Score = 43.1 bits (100), Expect(2) = 1e-34
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +1

Query: 289 RPPSRKLKTTYKASRPNLF 345
           RPPSRKLKTTYKASRPNLF
Sbjct: 159 RPPSRKLKTTYKASRPNLF 177


>ref|XP_002317384.1| predicted protein [Populus trichocarpa] gi|118483631|gb|ABK93710.1|
           unknown [Populus trichocarpa]
           gi|222860449|gb|EEE97996.1| predicted protein [Populus
           trichocarpa]
          Length = 178

 Score =  128 bits (322), Expect(2) = 1e-34
 Identities = 61/65 (93%), Positives = 61/65 (93%)
 Frame = +2

Query: 2   NMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHKKDIK 181
           NMYKEYRDTTLNG VEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFH   IK
Sbjct: 91  NMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIK 150

Query: 182 FPLVF 196
           FPLVF
Sbjct: 151 FPLVF 155



 Score = 43.1 bits (100), Expect(2) = 1e-34
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +1

Query: 289 RPPSRKLKTTYKASRPNLF 345
           RPPSRKLKTTYKASRPNLF
Sbjct: 159 RPPSRKLKTTYKASRPNLF 177


>gb|ABK93213.1| unknown [Populus trichocarpa] gi|118485561|gb|ABK94632.1| unknown
           [Populus trichocarpa]
          Length = 178

 Score =  128 bits (322), Expect(2) = 1e-34
 Identities = 61/65 (93%), Positives = 61/65 (93%)
 Frame = +2

Query: 2   NMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHKKDIK 181
           NMYKEYRDTTLNG VEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFH   IK
Sbjct: 91  NMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIK 150

Query: 182 FPLVF 196
           FPLVF
Sbjct: 151 FPLVF 155



 Score = 43.1 bits (100), Expect(2) = 1e-34
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +1

Query: 289 RPPSRKLKTTYKASRPNLF 345
           RPPSRKLKTTYKASRPNLF
Sbjct: 159 RPPSRKLKTTYKASRPNLF 177


>ref|XP_002337225.1| predicted protein [Populus trichocarpa] gi|222838512|gb|EEE76877.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  128 bits (322), Expect(2) = 1e-34
 Identities = 61/65 (93%), Positives = 61/65 (93%)
 Frame = +2

Query: 2   NMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHKKDIK 181
           NMYKEYRDTTLNG VEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFH   IK
Sbjct: 34  NMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIK 93

Query: 182 FPLVF 196
           FPLVF
Sbjct: 94  FPLVF 98



 Score = 43.1 bits (100), Expect(2) = 1e-34
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +1

Query: 289 RPPSRKLKTTYKASRPNLF 345
           RPPSRKLKTTYKASRPNLF
Sbjct: 102 RPPSRKLKTTYKASRPNLF 120


>ref|XP_002338831.1| predicted protein [Populus trichocarpa] gi|222873580|gb|EEF10711.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  128 bits (322), Expect(2) = 1e-34
 Identities = 61/65 (93%), Positives = 61/65 (93%)
 Frame = +2

Query: 2   NMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHKKDIK 181
           NMYKEYRDTTLNG VEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFH   IK
Sbjct: 26  NMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIK 85

Query: 182 FPLVF 196
           FPLVF
Sbjct: 86  FPLVF 90



 Score = 43.1 bits (100), Expect(2) = 1e-34
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +1

Query: 289 RPPSRKLKTTYKASRPNLF 345
           RPPSRKLKTTYKASRPNLF
Sbjct: 94  RPPSRKLKTTYKASRPNLF 112


Top