BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007027
         (1748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40278.3| unnamed protein product [Vitis vinifera]              413   e-113
ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]      408   e-111
ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]           394   e-107
emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]   392   e-106
gb|AAO72990.1| cyclin D [Populus alba]                                380   e-103

>emb|CBI40278.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  413 bits (1062), Expect = e-113
 Identities = 224/360 (62%), Positives = 260/360 (72%), Gaps = 2/360 (0%)
 Frame = +1

Query: 325  YLLDALYCXXXXXXXXXXXXXXNSNVTNETTLNPTTFLLEQDLFWEDEELVLLFSKEKEP 504
            +LLDALYC                     +TL P   LLEQDLFWEDEEL+ LFSKE E 
Sbjct: 20   FLLDALYCEEERWEEEEEDECLQEEAYPSSTLLPL-LLLEQDLFWEDEELLSLFSKE-EQ 77

Query: 505  HLLINSSNFDIDSSLVLARKEAVEWMLKVDAHYGFSALTAVLAVNYLDRFMSSLRFQKDK 684
               + + N ++D +L +AR++AVEWM+KV+AHYGFSA+TA+LA+NYLDRF+SSL FQ+DK
Sbjct: 78   QASLGAGNGEMDGALAVARRQAVEWMMKVNAHYGFSAVTAILAINYLDRFLSSLHFQRDK 137

Query: 685  PWMTQLAAVACLSVAAKVEETQVPLLLDLQVEETKYVFEAKTIQRMELLVLSTLHWKMNQ 864
            PWM QLAAV CLS+AAKVEETQVPLLLDLQVE++KYVFEAKTIQRMELLVLSTL WKMN 
Sbjct: 138  PWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQRMELLVLSTLQWKMNP 197

Query: 865  VTPLSFLDHIIRRLGLKNNLHWEFMKRCERLLLSVIADSRSVCYLPSVLATATMLHVIKE 1044
            VTPLSF+DHIIRRLGLK +LHWEF++ CER LLSV+ADSR V YLPSVLATATMLHVI  
Sbjct: 198  VTPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVVADSRFVRYLPSVLATATMLHVINH 257

Query: 1045 VEPCNPTEYQNQLMDILKINKDKLDECSALILDSTSGDIEENQNVSCTRKRKYQFEPGSP 1224
            VEPCNP EYQNQL+ ILKI+KDK+ EC  LI++ ++       N     KRKY   PGSP
Sbjct: 258  VEPCNPIEYQNQLLGILKIDKDKVTECHQLIVEVSNTHFYAQNN---PHKRKYTKIPGSP 314

Query: 1225 NGVIDXXXXXXXXXXXXXXXXXXXXXP-KCLFKKSRIQELQMPLPSFNRFAVNVI-TSPR 1398
            NGV+D                     P   LFKKSR QE QM LPS NR  V+VI +SPR
Sbjct: 315  NGVMDAYFSCDSSNDSWAVESSVSSSPVDPLFKKSRTQEQQMRLPSLNRVFVDVIGSSPR 374


>ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
          Length = 386

 Score =  408 bits (1049), Expect = e-111
 Identities = 227/372 (61%), Positives = 264/372 (70%), Gaps = 14/372 (3%)
 Frame = +1

Query: 325  YLLDALYCXXXXXXXXXXXXXXNS-------NVTNE-----TTLNPTTFLLEQDLFWEDE 468
            +LLDALYC                       NV N+     +TL P   LLEQDLFWEDE
Sbjct: 20   FLLDALYCEEERWEEEEEDECLQEEACEKYGNVDNDGIDPSSTLLPL-LLLEQDLFWEDE 78

Query: 469  ELVLLFSKEKEPHLLINSSNFDIDSSLVLARKEAVEWMLKVDAHYGFSALTAVLAVNYLD 648
            EL+ LFSKE E    + + N ++D +L +AR++AVEWM+KV+AHYGFSA+TA+LA+NYLD
Sbjct: 79   ELLSLFSKE-EQQASLGAGNGEMDGALAVARRQAVEWMMKVNAHYGFSAVTAILAINYLD 137

Query: 649  RFMSSLRFQKDKPWMTQLAAVACLSVAAKVEETQVPLLLDLQVEETKYVFEAKTIQRMEL 828
            RF+SSL FQ+DKPWM QLAAV CLS+AAKVEETQVPLLLDLQVE++KYVFEAKTIQRMEL
Sbjct: 138  RFLSSLHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQRMEL 197

Query: 829  LVLSTLHWKMNQVTPLSFLDHIIRRLGLKNNLHWEFMKRCERLLLSVIADSRSVCYLPSV 1008
            LVLSTL WKMN VTPLSF+DHIIRRLGLK +LHWEF++ CER LLSV+ADSR V YLPSV
Sbjct: 198  LVLSTLQWKMNPVTPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVVADSRFVRYLPSV 257

Query: 1009 LATATMLHVIKEVEPCNPTEYQNQLMDILKINKDKLDECSALILDSTSGDIEENQNVSCT 1188
            LATATMLHVI  VEPCNP EYQNQL+ ILKI+KDK+ EC  LI++ ++       N    
Sbjct: 258  LATATMLHVINHVEPCNPIEYQNQLLGILKIDKDKVTECHQLIVEVSNTHFYAQNN---P 314

Query: 1189 RKRKYQFEPGSPNGVIDXXXXXXXXXXXXXXXXXXXXXP-KCLFKKSRIQELQMPLPSFN 1365
             KRKY   PGSPNGV+D                     P   LFKKSR QE QM LPS N
Sbjct: 315  HKRKYTKIPGSPNGVMDAYFSCDSSNDSWAVESSVSSSPVDPLFKKSRTQEQQMRLPSLN 374

Query: 1366 RFAVNVI-TSPR 1398
            R  V+VI +SPR
Sbjct: 375  RVFVDVIGSSPR 386


>ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]
          Length = 372

 Score =  394 bits (1011), Expect = e-107
 Identities = 215/364 (59%), Positives = 254/364 (69%), Gaps = 6/364 (1%)
 Frame = +1

Query: 325  YLLDALYCXXXXXXXXXXXXXXNSNVTNET------TLNPTTFLLEQDLFWEDEELVLLF 486
            + LD LYC               ++   +       +L P T LLE DLFWED+EL  L 
Sbjct: 15   FFLDGLYCEEERFGDDDDGEVEEASEIEKCDREKKQSLFPLT-LLEHDLFWEDDELCSLI 73

Query: 487  SKEKEPHLLINSSNFDIDSSLVLARKEAVEWMLKVDAHYGFSALTAVLAVNYLDRFMSSL 666
            SKE++ H     S    D  L +AR +AVEWMLKV+AHYGFSALTAVLAVNY DRF+SS 
Sbjct: 74   SKEEQAHHCY--SGIISDGFLTVARTKAVEWMLKVNAHYGFSALTAVLAVNYFDRFLSSS 131

Query: 667  RFQKDKPWMTQLAAVACLSVAAKVEETQVPLLLDLQVEETKYVFEAKTIQRMELLVLSTL 846
             FQ+DKPWM+QLAAV CLS+AAKV+ET VPLLLDLQVEETKYVFEAKTIQRMELLVLS+L
Sbjct: 132  CFQRDKPWMSQLAAVTCLSLAAKVDETDVPLLLDLQVEETKYVFEAKTIQRMELLVLSSL 191

Query: 847  HWKMNQVTPLSFLDHIIRRLGLKNNLHWEFMKRCERLLLSVIADSRSVCYLPSVLATATM 1026
             WKMN VTP+SF DHIIRRLGLK +LHWEF++RCERLLLSVIADSR +CYLPS LATATM
Sbjct: 192  QWKMNPVTPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVIADSRFLCYLPSTLATATM 251

Query: 1027 LHVIKEVEPCNPTEYQNQLMDILKINKDKLDECSALILDSTSGDIEENQNVSCTRKRKYQ 1206
            LH+I EVEPCNP EYQNQL+ +LKI+K+ +D+C  LIL+   G     QN   T KRK+ 
Sbjct: 252  LHIITEVEPCNPLEYQNQLLSVLKISKNDVDDCYKLILEFL-GSHGHTQNQ--THKRKHL 308

Query: 1207 FEPGSPNGVIDXXXXXXXXXXXXXXXXXXXXXPKCLFKKSRIQELQMPLPSFNRFAVNVI 1386
              P SP+G+ D                      + LFKKSR Q+ QM LPS NR +V+V+
Sbjct: 309  SLPSSPSGIFDAPFSCDSSSDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVL 368

Query: 1387 TSPR 1398
            +SPR
Sbjct: 369  SSPR 372


>emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]
          Length = 372

 Score =  392 bits (1007), Expect = e-106
 Identities = 214/364 (58%), Positives = 253/364 (69%), Gaps = 6/364 (1%)
 Frame = +1

Query: 325  YLLDALYCXXXXXXXXXXXXXXNSNVTNET------TLNPTTFLLEQDLFWEDEELVLLF 486
            + LD LYC               ++   +       +L P T LLE DLFWED+EL  L 
Sbjct: 15   FFLDGLYCEEERFGDDDDGEVEEASEIEKCDREKKQSLFPLT-LLEHDLFWEDDELCSLI 73

Query: 487  SKEKEPHLLINSSNFDIDSSLVLARKEAVEWMLKVDAHYGFSALTAVLAVNYLDRFMSSL 666
            SKE++ H     S    D  L +AR +AVEWMLKV+AHYGFSALTAVLAVNY DRF+SS 
Sbjct: 74   SKEEQAHHCY--SGIISDGFLTVARTKAVEWMLKVNAHYGFSALTAVLAVNYFDRFLSSS 131

Query: 667  RFQKDKPWMTQLAAVACLSVAAKVEETQVPLLLDLQVEETKYVFEAKTIQRMELLVLSTL 846
             FQ+DKPWM+QLAAV CLS+AAKV+ET VPLLLDLQVEE KYVFEAKTIQRMELLVLS+L
Sbjct: 132  CFQRDKPWMSQLAAVTCLSLAAKVDETDVPLLLDLQVEEXKYVFEAKTIQRMELLVLSSL 191

Query: 847  HWKMNQVTPLSFLDHIIRRLGLKNNLHWEFMKRCERLLLSVIADSRSVCYLPSVLATATM 1026
             WKMN VTP+SF DHIIRRLGLK +LHWEF++RCERLLLSVIADSR +CYLPS LATATM
Sbjct: 192  QWKMNPVTPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVIADSRFLCYLPSTLATATM 251

Query: 1027 LHVIKEVEPCNPTEYQNQLMDILKINKDKLDECSALILDSTSGDIEENQNVSCTRKRKYQ 1206
            LH+I EVEPCNP EYQNQL+ +LKI+K+ +D+C  LIL+   G     QN   T KRK+ 
Sbjct: 252  LHIITEVEPCNPLEYQNQLLSVLKISKBDVDDCYKLILEFL-GXHGHTQNQ--THKRKHL 308

Query: 1207 FEPGSPNGVIDXXXXXXXXXXXXXXXXXXXXXPKCLFKKSRIQELQMPLPSFNRFAVNVI 1386
              P SP+G+ D                      + LFKKSR Q+ QM LPS NR +V+V+
Sbjct: 309  SLPSSPSGIFDAPFSCDSSSDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVL 368

Query: 1387 TSPR 1398
            +SPR
Sbjct: 369  SSPR 372


>gb|AAO72990.1| cyclin D [Populus alba]
          Length = 371

 Score =  380 bits (975), Expect = e-103
 Identities = 206/336 (61%), Positives = 243/336 (72%), Gaps = 1/336 (0%)
 Frame = +1

Query: 391  NSNVTNETTLNPTTFLLEQDLFWEDEELVLLFSKEKEPHLLINSSNFDIDSSLVLARKEA 570
            + NV  E  L+  + LLEQDLFWED EL+ L SKEKE H++ +S     D SL++ R+EA
Sbjct: 45   DQNVKKEQNLS--SVLLEQDLFWEDSELLSLISKEKETHVVFDSVG-SRDGSLMVVRREA 101

Query: 571  VEWMLKVDAHYGFSALTAVLAVNYLDRFMSSLRFQKDKPWMTQLAAVACLSVAAKVEETQ 750
            VEW L+V AHYGFSALT VLAVNY DRF+SS RF++DKPWM QLAAVACLS+AAKVEETQ
Sbjct: 102  VEWFLRVKAHYGFSALTGVLAVNYFDRFISSSRFRRDKPWMGQLAAVACLSLAAKVEETQ 161

Query: 751  VPLLLDLQVEETKYVFEAKTIQRMELLVLSTLHWKMNQVTPLSFLDHIIRRLGLKNNLHW 930
            VPLLLDLQVE+ KYVFEAKTI+RMEL VLSTLHW+MN VT +SF DHIIRRLGLK ++HW
Sbjct: 162  VPLLLDLQVEDAKYVFEAKTIKRMELWVLSTLHWRMNPVTSISFFDHIIRRLGLKTHMHW 221

Query: 931  EFMKRCERLLLSVIADSRSVCYLPSVLATATMLHVIKEVEPCNPTEYQNQLMDILKINKD 1110
            EF+ RCERLLLSVI+DSR + YLPS+LATATMLHVIKEVEP N  +YQ QLM +LK N+D
Sbjct: 222  EFLWRCERLLLSVISDSRFMSYLPSILATATMLHVIKEVEPRNQLQYQTQLMAVLKTNED 281

Query: 1111 KLDECSALILDSTSGDIEENQNVSCTRKRKYQFEPGSPNGVIDXXXXXXXXXXXXXXXXX 1290
            +++EC  LIL+       +NQ      KRKY   P SPNGVID                 
Sbjct: 282  EVNECYRLILEQPG---SQNQR----HKRKYLSTPSSPNGVIDASFSSENSNDSWAVASS 334

Query: 1291 XXXXPKC-LFKKSRIQELQMPLPSFNRFAVNVITSP 1395
                     FK+SR Q  QM LPS NR  V+V++SP
Sbjct: 335  ISSSSSVPQFKRSRAQVQQMRLPSLNRMCVDVLSSP 370