BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007026
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510922.1| 40S ribosomal protein S20, putative [Ricinus...    89   2e-20
ref|XP_002265347.1| PREDICTED: 40S ribosomal protein S20-2 isofo...    89   3e-18
ref|NP_201036.1| 40S ribosomal protein S20-1 [Arabidopsis thalia...    89   4e-18
ref|NP_001242027.1| uncharacterized protein LOC100803623 [Glycin...    90   5e-18
ref|XP_002877555.1| 40S ribosomal protein S20 [Arabidopsis lyrat...    89   6e-18

>ref|XP_002510922.1| 40S ribosomal protein S20, putative [Ricinus communis]
           gi|223550037|gb|EEF51524.1| 40S ribosomal protein S20,
           putative [Ricinus communis]
          Length = 124

 Score = 89.4 bits (220), Expect(2) = 2e-20
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = -1

Query: 140 KNVKNLEKVCADLVRGAKEKLLRVKGPVRMPTKVLKITTRKSPCGE 3
           KNVKNLEKVCADLVRGAK+K LRVKGPVRMPTKVL ITTRKSPCGE
Sbjct: 32  KNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGE 77



 Score = 34.7 bits (78), Expect(2) = 2e-20
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 307 AAYGAMKPAKAGFEEPPK 254
           AAYGAMKPAKAG EE P+
Sbjct: 3   AAYGAMKPAKAGLEESPE 20


>ref|XP_002265347.1| PREDICTED: 40S ribosomal protein S20-2 isoform 1 [Vitis vinifera]
           gi|359490182|ref|XP_003634047.1| PREDICTED: 40S
           ribosomal protein S20-2 isoform 2 [Vitis vinifera]
           gi|147777804|emb|CAN62522.1| hypothetical protein
           VITISV_002374 [Vitis vinifera]
          Length = 122

 Score = 89.4 bits (220), Expect(2) = 3e-18
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = -1

Query: 140 KNVKNLEKVCADLVRGAKEKLLRVKGPVRMPTKVLKITTRKSPCGE 3
           KNVKNLEKVCADLVRGAK+K LRVKGPVRMPTKVL ITTRKSPCGE
Sbjct: 30  KNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGE 75



 Score = 27.3 bits (59), Expect(2) = 3e-18
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -2

Query: 304 AYGAMKPAKAGFEEP 260
           AY AMKP K G EEP
Sbjct: 2   AYAAMKPTKPGLEEP 16


>ref|NP_201036.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana]
           gi|22331606|ref|NP_190089.2| 40S ribosomal protein S20-1
           [Arabidopsis thaliana] gi|145334871|ref|NP_001078781.1|
           40S ribosomal protein S20-1 [Arabidopsis thaliana]
           gi|21542443|sp|P49200.2|RS201_ARATH RecName: Full=40S
           ribosomal protein S20-1
           gi|11762182|gb|AAG40369.1|AF325017_1 AT5g62300
           [Arabidopsis thaliana]
           gi|13877519|gb|AAK43837.1|AF370460_1 40S ribosomal
           protein S20 [Arabidopsis thaliana]
           gi|20465624|gb|AAM20143.1| putative 40S ribsomomal
           protein [Arabidopsis thaliana]
           gi|21281054|gb|AAM45072.1| putative 40S ribsomomal
           protein [Arabidopsis thaliana]
           gi|21553799|gb|AAM62892.1| ribosomal protein S20-like
           protein [Arabidopsis thaliana]
           gi|332010210|gb|AED97593.1| 40S ribosomal protein S20-1
           [Arabidopsis thaliana] gi|332010211|gb|AED97594.1| 40S
           ribosomal protein S20-1 [Arabidopsis thaliana]
           gi|332644460|gb|AEE77981.1| 40S ribosomal protein S20-1
           [Arabidopsis thaliana]
          Length = 124

 Score = 89.0 bits (219), Expect(2) = 4e-18
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = -1

Query: 140 KNVKNLEKVCADLVRGAKEKLLRVKGPVRMPTKVLKITTRKSPCGE 3
           KNVKNLEKVC DLVRGAK+K LRVKGPVRMPTKVLKITTRK+PCGE
Sbjct: 32  KNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGE 77



 Score = 27.3 bits (59), Expect(2) = 4e-18
 Identities = 14/19 (73%), Positives = 14/19 (73%)
 Frame = -2

Query: 316 MATAAYGAMKPAKAGFEEP 260
           MATA Y  MKP KAG EEP
Sbjct: 1   MATA-YQPMKPGKAGLEEP 18


>ref|NP_001242027.1| uncharacterized protein LOC100803623 [Glycine max]
           gi|255640525|gb|ACU20548.1| unknown [Glycine max]
          Length = 122

 Score = 89.7 bits (221), Expect(2) = 5e-18
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = -1

Query: 140 KNVKNLEKVCADLVRGAKEKLLRVKGPVRMPTKVLKITTRKSPCGE 3
           KNVKNLEKVCADLVRGAK+K LRVKGPVRMPTKVL ITTRKSPCGE
Sbjct: 30  KNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGE 75



 Score = 26.2 bits (56), Expect(2) = 5e-18
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -2

Query: 304 AYGAMKPAKAGFEEP 260
           AY AMK  KAG EEP
Sbjct: 2   AYAAMKSTKAGLEEP 16


>ref|XP_002877555.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata]
           gi|297323393|gb|EFH53814.1| 40S ribosomal protein S20
           [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 89.0 bits (219), Expect(2) = 6e-18
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = -1

Query: 140 KNVKNLEKVCADLVRGAKEKLLRVKGPVRMPTKVLKITTRKSPCGE 3
           KNVKNLEKVC DLVRGAK+K LRVKGPVRMPTKVLKITTRK+PCGE
Sbjct: 30  KNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGE 75



 Score = 26.6 bits (57), Expect(2) = 6e-18
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -2

Query: 304 AYGAMKPAKAGFEEP 260
           AY  MKP KAG EEP
Sbjct: 2   AYEPMKPTKAGLEEP 16