BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007024
         (1592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   597   e-168
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   595   e-167
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              588   e-165
ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2...   584   e-164
ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [...   576   e-162

>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
            gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
            pseudourine synthase 7-like isoform 1 [Vitis vinifera]
          Length = 386

 Score =  597 bits (1540), Expect = e-168
 Identities = 285/382 (74%), Positives = 327/382 (85%), Gaps = 2/382 (0%)
 Frame = -3

Query: 1569 KRKRGKG-DMEIVWQTPANSPERHDYIFRNGKRYVRPYYFEFISHVKNRWAGKTIVDLFA 1393
            KR+R +  +MEIVWQTPAN PERHDYIFRNGKR+VRPYYFEFISHVKNRWAGKTIVDLF 
Sbjct: 2    KRRRDEAAEMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFT 61

Query: 1392 QEFKGRPYDYYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSILHK 1213
            +EFKGRPYDYYV+AV+ GRIQVDGEMVPVSY+V+SSQKISHF+HRHEPPV+ALD+S+L K
Sbjct: 62   EEFKGRPYDYYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQK 121

Query: 1212 ESEVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARSAA 1033
            E +V+T+CKPASVPVHPCGQYRKNTVVGILQAEH LAPLFP+HRLDRLVSGLLILARSA+
Sbjct: 122  EPDVLTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSAS 181

Query: 1032 KADLFRQQIEAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPGDIHPK 856
            KAD FRQQIEAGMVQKQYIAKV GVFP  E VVN NV+YNAREGRS+ E   C G+   K
Sbjct: 182  KADSFRQQIEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPLK 241

Query: 855  GKSSCTKFTRISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRSTV 676
            GKS+CTKFTRISTNGT+SIVLCEP+TGRTHQIRVHL+Y GHPIAND LYL +    RST 
Sbjct: 242  GKSACTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTK 301

Query: 675  EVTAEKEAMLNSDHSAFQFPNNGQSDESEESSSKNFSIDPMCTNCPDLVPKGYGKDEEGL 496
             ++A++ A  +        P +   +  +++S+ +FSIDPMCTNCP+L PKGY +DEEGL
Sbjct: 302  GLSADRAAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGL 361

Query: 495  WLHCARYSGPGWVYECPYPDWA 430
            WLHC RY GP WVYECP+P+WA
Sbjct: 362  WLHCIRYCGPDWVYECPHPEWA 383


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 385

 Score =  595 bits (1534), Expect = e-167
 Identities = 289/387 (74%), Positives = 330/387 (85%), Gaps = 4/387 (1%)
 Frame = -3

Query: 1569 KRKR---GKGDMEIVWQTPANSPERHDYIFRNGKRYVRPYYFEFISHVKNRWAGKTIVDL 1399
            KRKR    K DMEIVWQTPAN PE+HDYIFR+G+R+VRPYYFEFISH KNRWAGKTIVDL
Sbjct: 2    KRKREEENKNDMEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIVDL 61

Query: 1398 FAQEFKGRPYDYYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSIL 1219
            FA+EFKGRPYDYYVSAV+CGRIQVDGE VPVSY+VKSSQKISHFLHRHEPPV A D+ +L
Sbjct: 62   FAEEFKGRPYDYYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIPVL 121

Query: 1218 HKESEVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARS 1039
            +K+ +VVTV KPA+VPVHPCGQYRKNTVVGILQAEH+LAPLFPVHRLDRLVSGLLILAR+
Sbjct: 122  YKDPDVVTVYKPATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILARN 181

Query: 1038 AAKADLFRQQIEAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPGDIH 862
            A KADLFRQ+IEAGMVQKQY+AKV+GVFP+ E VV  N++YNAREGRS+AE      D  
Sbjct: 182  ALKADLFRQEIEAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVDSP 241

Query: 861  PKGKSSCTKFTRISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRS 682
            PKGK++CTKFTRISTNGT+SIVLC+P+TGRTHQIRVHL+Y GHPIAND LYL +  A+RS
Sbjct: 242  PKGKTACTKFTRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAASRS 301

Query: 681  TVEVTAEKEAMLNSDHSAFQFPNNGQSDESEESSSKNFSIDPMCTNCPDLVPKGYGKDEE 502
               ++A++ A      S    P +  SD  EE+S ++FSIDPMCTNCP+L PKGY   EE
Sbjct: 302  AEGMSADRAA---CSSSYCVTPQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVYEE 358

Query: 501  GLWLHCARYSGPGWVYECPYPDWAVLS 421
             LWLHC +YSGPGWVYECPYPDWA+LS
Sbjct: 359  CLWLHCVQYSGPGWVYECPYPDWAILS 385


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  588 bits (1517), Expect = e-165
 Identities = 281/373 (75%), Positives = 320/373 (85%), Gaps = 1/373 (0%)
 Frame = -3

Query: 1545 MEIVWQTPANSPERHDYIFRNGKRYVRPYYFEFISHVKNRWAGKTIVDLFAQEFKGRPYD 1366
            MEIVWQTPAN PERHDYIFRNGKR+VRPYYFEFISHVKNRWAGKTIVDLF +EFKGRPYD
Sbjct: 1    MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYD 60

Query: 1365 YYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSILHKESEVVTVCK 1186
            YYV+AV+ GRIQVDGEMVPVSY+V+SSQKISHF+HRHEPPV+ALD+S+L KE +V+T+CK
Sbjct: 61   YYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICK 120

Query: 1185 PASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARSAAKADLFRQQI 1006
            PASVPVHPCGQYRKNTVVGILQAEH LAPLFP+HRLDRLVSGLLILARSA+KAD FRQQI
Sbjct: 121  PASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQI 180

Query: 1005 EAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPGDIHPKGKSSCTKFT 829
            EAGMVQKQYIAKV GVFP  E VVN NV+YNAREGRS+     C G+   KGKS+CTKFT
Sbjct: 181  EAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTV--GNCCGNTPLKGKSACTKFT 238

Query: 828  RISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRSTVEVTAEKEAM 649
            RISTNGT+SIVLCEP+TGRTHQIRVHL+Y GHPIAND LYL +    RST  ++A++ A 
Sbjct: 239  RISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAA 298

Query: 648  LNSDHSAFQFPNNGQSDESEESSSKNFSIDPMCTNCPDLVPKGYGKDEEGLWLHCARYSG 469
             +        P +   +  +++S+ +FSIDPMCTNCP+L PKGY +DEEGLWLHC RY G
Sbjct: 299  NSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCG 358

Query: 468  PGWVYECPYPDWA 430
            P WVYECP+P+WA
Sbjct: 359  PDWVYECPHPEWA 371


>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
            predicted protein [Populus trichocarpa]
          Length = 388

 Score =  584 bits (1505), Expect = e-164
 Identities = 283/388 (72%), Positives = 328/388 (84%), Gaps = 7/388 (1%)
 Frame = -3

Query: 1569 KRKRGKGD------MEIVWQTPANSPERHDYIFRNGKRYVRPYYFEFISHVKNRWAGKTI 1408
            KRKRG+ +      MEIVWQTPAN PE+HDYIFR+G+R+VRPY+FEFISHVKNRWAGKTI
Sbjct: 2    KRKRGEKEEAAEKKMEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKTI 61

Query: 1407 VDLFAQEFKGRPYDYYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDL 1228
            VDLFA+EFKGRPYDYYVSAV+CGRIQVDGEMVPVSY+VKSSQKISHF+HRHEPPVMA D+
Sbjct: 62   VDLFAEEFKGRPYDYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWDV 121

Query: 1227 SILHKESEVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLIL 1048
             IL KE +VVTV KPA+VPVHPCGQYRKNTVVG+LQAEH LAPLFPVHRLDRLVSGLLIL
Sbjct: 122  PILDKEDDVVTVWKPATVPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLIL 181

Query: 1047 ARSAAKADLFRQQIEAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPG 871
            AR+A +ADLFRQ+IEAG VQKQY+AKVIGVFP+ E +V+ NV+YNAREGRS+ E      
Sbjct: 182  ARNATRADLFRQEIEAGKVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSCD 241

Query: 870  DIHPKGKSSCTKFTRISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVA 691
                KGK++CTKFTRI TNG +SIVLC+P+TGRTHQIRVHL+Y GHPIAND LYL + V 
Sbjct: 242  GSPIKGKTACTKFTRIGTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENVT 301

Query: 690  TRSTVEVTAEKEAMLNSDHSAFQFPNNGQSDESEESSSKNFSIDPMCTNCPDLVPKGYGK 511
             RS+  V A++ A  +S ++    P N  SD+ E+S+ ++F IDPMCTNCP+LVPKGY  
Sbjct: 302  NRSSEGVNADRAA--HSPNNCL-VPENNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGYDG 358

Query: 510  DEEGLWLHCARYSGPGWVYECPYPDWAV 427
             EEGLWLHC +YSG GWVY+CPYPDWAV
Sbjct: 359  HEEGLWLHCVQYSGSGWVYQCPYPDWAV 386


>ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [Glycine max]
          Length = 381

 Score =  576 bits (1485), Expect = e-162
 Identities = 283/385 (73%), Positives = 322/385 (83%), Gaps = 3/385 (0%)
 Frame = -3

Query: 1569 KRKR-GKGDME-IVWQTPANSPERHDYIFRNGKRYVRPYYFEFISHVKNRWAGKTIVDLF 1396
            KRKR GK  M+ IVWQTPAN P  +DY+FRNG RYVRPYYFEFI+HVKNRWAGKTIVDLF
Sbjct: 2    KRKREGKEGMDNIVWQTPANPPHPNDYVFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDLF 61

Query: 1395 AQEFKGRPYDYYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSILH 1216
            A+EFKGRPY+YYVSAV+CGRIQVDGEMVPVSY+VKSSQKISHFLHRHEPPVMA ++ +L 
Sbjct: 62   AEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMACEVPVLQ 121

Query: 1215 KESEVVTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARSA 1036
            K+ +V+TVCKPASVPVHPCGQYRKNTVVGILQAEH L PLFPVHRLDRLVSGLLILAR+A
Sbjct: 122  KDIDVLTVCKPASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLILARNA 181

Query: 1035 AKADLFRQQIEAGMVQKQYIAKVIGVFPKAEV-VNANVDYNAREGRSSAEEEKCPGDIHP 859
            AKAD+FRQQIEAG+V KQYIAKV G FP+ EV V+AN+DYNAREGRS+AE          
Sbjct: 182  AKADIFRQQIEAGLVHKQYIAKVGGEFPEDEVIVDANIDYNAREGRSTAEVRG-----SA 236

Query: 858  KGKSSCTKFTRISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRST 679
            KGK++ TKFTRISTNGT SIVLCEP+TGRTHQIRVHL+Y+GHPIAND LY+ +    RS 
Sbjct: 237  KGKAASTKFTRISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSV 296

Query: 678  VEVTAEKEAMLNSDHSAFQFPNNGQSDESEESSSKNFSIDPMCTNCPDLVPKGYGKDEEG 499
              ++A++ A ++       F N    +E EE+S+ +F IDPMCTNCP+L PKGY  DEEG
Sbjct: 297  KGLSADRSARISGVSLTSNF-NEKVLNECEENSNGDFGIDPMCTNCPNLAPKGYDSDEEG 355

Query: 498  LWLHCARYSGPGWVYECPYPDWAVL 424
            LWLHC RYSGPGW YECPYPDWA L
Sbjct: 356  LWLHCIRYSGPGWTYECPYPDWAKL 380