BLASTX nr result

ID: Coptis23_contig00007021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007021
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34692.3| unnamed protein product [Vitis vinifera]              250   3e-64
ref|XP_002269437.1| PREDICTED: protein LURP-one-related 4 [Vitis...   249   6e-64
ref|XP_002269503.1| PREDICTED: protein LURP-one-related 4 [Vitis...   234   2e-59
emb|CBI34691.3| unnamed protein product [Vitis vinifera]              233   5e-59
ref|XP_002269469.1| PREDICTED: protein LURP-one-related 4 [Vitis...   232   8e-59

>emb|CBI34692.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  250 bits (638), Expect = 3e-64
 Identities = 123/216 (56%), Positives = 158/216 (73%)
 Frame = -3

Query: 719 MARVYPRAGLTFPXXXXXXXXXXSPYVTSEREVFTIWMKSIVLNGNGCTVFDASGNIVYR 540
           MA+V+P+     P             +TS+RE FTIWMKS+V+ GNGCTVF++ G IVYR
Sbjct: 1   MAKVHPQTFTAAPLSPPSDSC-----ITSKREAFTIWMKSLVIQGNGCTVFNSDGEIVYR 55

Query: 539 IDNYNSKCSNEVYLMDLRGSVLFTIHKKKLRLFGRWEGYRATSPMLENNKTWFQVRKVCR 360
           IDNY+ KCS+EVYLMDL+G VLFTI ++KLR+FGRWEGY++      N K WFQVRK CR
Sbjct: 56  IDNYDKKCSSEVYLMDLQGKVLFTILQRKLRVFGRWEGYKSNGSKGNNQKPWFQVRKNCR 115

Query: 359 MSKSNSPCEVTVEGDNNESRCYRIETMPNKSACKIVNQGGGLVAEVKKKQTSSGVALGDD 180
           +    S C+VTV  +  +S CYRI+ +  KSA KIV+  GGL+AEV++KQTSSGV LG+D
Sbjct: 116 ILGGGSSCQVTVRPNEAQSYCYRIQGLTGKSAFKIVDSQGGLLAEVEQKQTSSGVVLGED 175

Query: 179 VLTLVVEPHIDHSLIMGIVTVYGLINRKM*RNFVCV 72
           VL LVVEPH+DHSL+M +V VYGLI+ ++  NF C+
Sbjct: 176 VLNLVVEPHVDHSLVMALVAVYGLIHHRI--NFSCL 209


>ref|XP_002269437.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 204

 Score =  249 bits (635), Expect = 6e-64
 Identities = 121/209 (57%), Positives = 154/209 (73%)
 Frame = -3

Query: 719 MARVYPRAGLTFPXXXXXXXXXXSPYVTSEREVFTIWMKSIVLNGNGCTVFDASGNIVYR 540
           MA+V+P+     P             +TS+RE FTIWMKS+V+ GNGCTVF++ G IVYR
Sbjct: 1   MAKVHPQTFTAAPLSPPSDSC-----ITSKREAFTIWMKSLVIQGNGCTVFNSDGEIVYR 55

Query: 539 IDNYNSKCSNEVYLMDLRGSVLFTIHKKKLRLFGRWEGYRATSPMLENNKTWFQVRKVCR 360
           IDNY+ KCS+EVYLMDL+G VLFTI ++KLR+FGRWEGY++      N K WFQVRK CR
Sbjct: 56  IDNYDKKCSSEVYLMDLQGKVLFTILQRKLRVFGRWEGYKSNGSKGNNQKPWFQVRKNCR 115

Query: 359 MSKSNSPCEVTVEGDNNESRCYRIETMPNKSACKIVNQGGGLVAEVKKKQTSSGVALGDD 180
           +    S C+VTV  +  +S CYRI+ +  KSA KIV+  GGL+AEV++KQTSSGV LG+D
Sbjct: 116 ILGGGSSCQVTVRPNEAQSYCYRIQGLTGKSAFKIVDSQGGLLAEVEQKQTSSGVVLGED 175

Query: 179 VLTLVVEPHIDHSLIMGIVTVYGLINRKM 93
           VL LVVEPH+DHSL+M +V VYGLI+ +M
Sbjct: 176 VLNLVVEPHVDHSLVMALVAVYGLIHHRM 204


>ref|XP_002269503.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 202

 Score =  234 bits (596), Expect = 2e-59
 Identities = 112/184 (60%), Positives = 142/184 (77%)
 Frame = -3

Query: 644 YVTSEREVFTIWMKSIVLNGNGCTVFDASGNIVYRIDNYNSKCSNEVYLMDLRGSVLFTI 465
           Y+TS RE FT+WMKS+V+ GNG TVF++ G IVYR+DNY+ KCS+EVYLMDL+G VLFTI
Sbjct: 19  YITSRRETFTLWMKSLVIRGNGYTVFNSDGEIVYRMDNYDKKCSSEVYLMDLQGKVLFTI 78

Query: 464 HKKKLRLFGRWEGYRATSPMLENNKTWFQVRKVCRMSKSNSPCEVTVEGDNNESRCYRIE 285
            ++KLR+FGRWEGY+ +   + + K  FQVRK CR+    S CEVTV  +  +S  YRI+
Sbjct: 79  LRRKLRVFGRWEGYKCSGSKVGSQKPCFQVRKHCRILGGGSSCEVTVRPNEAQSYHYRIQ 138

Query: 284 TMPNKSACKIVNQGGGLVAEVKKKQTSSGVALGDDVLTLVVEPHIDHSLIMGIVTVYGLI 105
            +  KS  KIVN  GG++AEVK+KQTSSGV LGDDVL LVVEPH+DHSL+M +V V GLI
Sbjct: 139 GLAGKSTFKIVNSEGGVMAEVKQKQTSSGVVLGDDVLDLVVEPHVDHSLVMALVAVCGLI 198

Query: 104 NRKM 93
           + +M
Sbjct: 199 HHRM 202


>emb|CBI34691.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  233 bits (593), Expect = 5e-59
 Identities = 117/212 (55%), Positives = 148/212 (69%)
 Frame = -3

Query: 728 LTNMARVYPRAGLTFPXXXXXXXXXXSPYVTSEREVFTIWMKSIVLNGNGCTVFDASGNI 549
           L  MA+V+P+     P             +TS RE FT+WMKS+V+ GNG TVF++ G I
Sbjct: 191 LVAMAKVHPQMPAAVPPPPPPPSDSC---ITSRRETFTLWMKSLVIQGNGYTVFNSDGEI 247

Query: 548 VYRIDNYNSKCSNEVYLMDLRGSVLFTIHKKKLRLFGRWEGYRATSPMLENNKTWFQVRK 369
           VYRIDNY+ KCS+EVYLMDL+G VLFTI ++KL +FGRWEGY+      ++ K  FQVRK
Sbjct: 248 VYRIDNYDKKCSSEVYLMDLQGKVLFTILQRKLHVFGRWEGYKCNGSKADSQKPCFQVRK 307

Query: 368 VCRMSKSNSPCEVTVEGDNNESRCYRIETMPNKSACKIVNQGGGLVAEVKKKQTSSGVAL 189
            CR+    S CEVTV  +  +S  YRI+ +  KS  KIVN  GG++AEVK+KQTSSGV L
Sbjct: 308 HCRILGGGSSCEVTVRPNEAQSCYYRIQGLAGKSTFKIVNSEGGVMAEVKQKQTSSGVVL 367

Query: 188 GDDVLTLVVEPHIDHSLIMGIVTVYGLINRKM 93
           GDDVL LVVEPH+DHSL+M +V V GLI+ +M
Sbjct: 368 GDDVLNLVVEPHVDHSLVMALVAVCGLIHHRM 399



 Score =  225 bits (573), Expect = 1e-56
 Identities = 107/176 (60%), Positives = 136/176 (77%)
 Frame = -3

Query: 644 YVTSEREVFTIWMKSIVLNGNGCTVFDASGNIVYRIDNYNSKCSNEVYLMDLRGSVLFTI 465
           Y+TS RE FT+WMKS+V+ GNG TVF++ G IVYR+DNY+ KCS+EVYLMDL+G VLFTI
Sbjct: 19  YITSRRETFTLWMKSLVIRGNGYTVFNSDGEIVYRMDNYDKKCSSEVYLMDLQGKVLFTI 78

Query: 464 HKKKLRLFGRWEGYRATSPMLENNKTWFQVRKVCRMSKSNSPCEVTVEGDNNESRCYRIE 285
            ++KLR+FGRWEGY+ +   + + K  FQVRK CR+    S CEVTV  +  +S  YRI+
Sbjct: 79  LRRKLRVFGRWEGYKCSGSKVGSQKPCFQVRKHCRILGGGSSCEVTVRPNEAQSYHYRIQ 138

Query: 284 TMPNKSACKIVNQGGGLVAEVKKKQTSSGVALGDDVLTLVVEPHIDHSLIMGIVTV 117
            +  KS  KIVN  GG++AEVK+KQTSSGV LGDDVL LVVEPH+DHSL+M +V +
Sbjct: 139 GLAGKSTFKIVNSEGGVMAEVKQKQTSSGVVLGDDVLDLVVEPHVDHSLVMALVAM 194


>ref|XP_002269469.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 206

 Score =  232 bits (591), Expect = 8e-59
 Identities = 116/209 (55%), Positives = 147/209 (70%)
 Frame = -3

Query: 719 MARVYPRAGLTFPXXXXXXXXXXSPYVTSEREVFTIWMKSIVLNGNGCTVFDASGNIVYR 540
           MA+V+P+     P             +TS RE FT+WMKS+V+ GNG TVF++ G IVYR
Sbjct: 1   MAKVHPQMPAAVPPPPPPPSDSC---ITSRRETFTLWMKSLVIQGNGYTVFNSDGEIVYR 57

Query: 539 IDNYNSKCSNEVYLMDLRGSVLFTIHKKKLRLFGRWEGYRATSPMLENNKTWFQVRKVCR 360
           IDNY+ KCS+EVYLMDL+G VLFTI ++KL +FGRWEGY+      ++ K  FQVRK CR
Sbjct: 58  IDNYDKKCSSEVYLMDLQGKVLFTILQRKLHVFGRWEGYKCNGSKADSQKPCFQVRKHCR 117

Query: 359 MSKSNSPCEVTVEGDNNESRCYRIETMPNKSACKIVNQGGGLVAEVKKKQTSSGVALGDD 180
           +    S CEVTV  +  +S  YRI+ +  KS  KIVN  GG++AEVK+KQTSSGV LGDD
Sbjct: 118 ILGGGSSCEVTVRPNEAQSCYYRIQGLAGKSTFKIVNSEGGVMAEVKQKQTSSGVVLGDD 177

Query: 179 VLTLVVEPHIDHSLIMGIVTVYGLINRKM 93
           VL LVVEPH+DHSL+M +V V GLI+ +M
Sbjct: 178 VLNLVVEPHVDHSLVMALVAVCGLIHHRM 206


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