BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007007
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001189735.1| F-box protein [Arabidopsis thaliana] gi|1222...    77   7e-12
ref|NP_181801.1| F-box protein [Arabidopsis thaliana] gi|4512680...    77   7e-12
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    68   6e-09
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    68   6e-09
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]    65   3e-08

>ref|NP_001189735.1| F-box protein [Arabidopsis thaliana]
            gi|122223784|sp|Q0WR05.1|FBL39_ARATH RecName:
            Full=F-box/LRR-repeat protein At2g42730
            gi|110736977|dbj|BAF00444.1| hypothetical protein
            [Arabidopsis thaliana] gi|330255068|gb|AEC10162.1| F-box
            protein [Arabidopsis thaliana]
          Length = 457

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 14/295 (4%)
 Frame = -3

Query: 1235 DFRDFVDETLLSHNGSDIKSFSLTVKLGDTF-VSSCHLNSWISFAVKHNVQDFK-FSSYT 1062
            ++  FVD+ L +  GS IK  +L   +G      S  + SWI   + H V D   F +  
Sbjct: 68   NYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDVFITLK 127

Query: 1061 HEIEKLPQCLFXXXXXXXXXL-YSVVIKGPRNIKFPMLKSLALLEVT-INDENLVNSLLS 888
             +   +P  +F         +     IK  +++  P+L++L L  V  +   N+V +L+S
Sbjct: 128  GKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNFVGGHNVVGTLIS 187

Query: 887  SSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHL-LDSNYPDINISNSVLRKLK---YMC 720
               CPV+E+LV+        T S+S P+LK LH+  D  +  I++    L   K   Y+ 
Sbjct: 188  R--CPVLEELVVEERRCVDWTCSVSSPSLKRLHIRFDRKFTSISLDAPNLIYYKHSGYVL 245

Query: 719  GKSPNLIYENLVSVVSAKLQFELD----FSYYGGSMDSVSKCASKILVWLRNVEKLCLMS 552
            GK PN+    L S++ A+L   +D         GS+ S+      ++  +RNV  L L S
Sbjct: 246  GKYPNV---KLDSLIEARLNLRMDETRMVGVRNGSLGSIPADMRNLINGIRNVRILHLSS 302

Query: 551  GFIEFLSMDQEFLAGVPSSCCSLKHLHVDMFASEKHA--QVITLLSRSYPNLQTL 393
              +E L    + +  +  S  SL         ++K    Q++ LL ++ PNL+TL
Sbjct: 303  HTLELLYFSCKEMP-LFDSLVSLS------IGNDKARGWQMLPLLIKNSPNLETL 350


>ref|NP_181801.1| F-box protein [Arabidopsis thaliana] gi|4512680|gb|AAD21734.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis
            thaliana]
          Length = 737

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 14/295 (4%)
 Frame = -3

Query: 1235 DFRDFVDETLLSHNGSDIKSFSLTVKLGDTF-VSSCHLNSWISFAVKHNVQDFK-FSSYT 1062
            ++  FVD+ L +  GS IK  +L   +G      S  + SWI   + H V D   F +  
Sbjct: 68   NYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDVFITLK 127

Query: 1061 HEIEKLPQCLFXXXXXXXXXL-YSVVIKGPRNIKFPMLKSLALLEVT-INDENLVNSLLS 888
             +   +P  +F         +     IK  +++  P+L++L L  V  +   N+V +L+S
Sbjct: 128  GKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNFVGGHNVVGTLIS 187

Query: 887  SSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHL-LDSNYPDINISNSVLRKLK---YMC 720
               CPV+E+LV+        T S+S P+LK LH+  D  +  I++    L   K   Y+ 
Sbjct: 188  R--CPVLEELVVEERRCVDWTCSVSSPSLKRLHIRFDRKFTSISLDAPNLIYYKHSGYVL 245

Query: 719  GKSPNLIYENLVSVVSAKLQFELD----FSYYGGSMDSVSKCASKILVWLRNVEKLCLMS 552
            GK PN+    L S++ A+L   +D         GS+ S+      ++  +RNV  L L S
Sbjct: 246  GKYPNV---KLDSLIEARLNLRMDETRMVGVRNGSLGSIPADMRNLINGIRNVRILHLSS 302

Query: 551  GFIEFLSMDQEFLAGVPSSCCSLKHLHVDMFASEKHA--QVITLLSRSYPNLQTL 393
              +E L    + +  +  S  SL         ++K    Q++ LL ++ PNL+TL
Sbjct: 303  HTLELLYFSCKEMP-LFDSLVSLS------IGNDKARGWQMLPLLIKNSPNLETL 350


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 428

 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 67/292 (22%), Positives = 125/292 (42%), Gaps = 2/292 (0%)
 Frame = -3

Query: 1262 SSRALLVPMDFRDFVDETLLSHNGSDIKSFSLTVKLGDTFVSSCHLNSWISFAVKHNVQD 1083
            S   L++       +D  LL H+G  IK F L+ +     +    ++ W     +  V++
Sbjct: 70   SEDLLVIKSKLSRIIDHVLLLHSGP-IKKFKLSHR---ELIGVTDIDRWTLHLTRRPVKE 125

Query: 1082 FKFSSYTHEIEKLPQCLFXXXXXXXXXLYSVVIKGPRNIK-FPMLKSLALLEVTINDENL 906
            F    +  +  K+P CLF         L++  +  P   + F  LKSL L  VT++ +  
Sbjct: 126  FVLEIWKGQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAF 185

Query: 905  VNSLLSSSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHLLDSNYPDINISNSVLRKLKY 726
             N +   STCP++E+L + +     N L+I  P L+        + DI            
Sbjct: 186  ENLI---STCPLLERLTL-MNFDGFNYLNIHAPNLQ--------FFDIG----------- 222

Query: 725  MCGKSPNLIYENLVSVVSAKLQFELDFSYYGGSMDSVSKCASKILVWLRNVEKLCLMSGF 546
              GK  ++ ++N   +    +   ++F    G +   +    + L+ L  +++L + S F
Sbjct: 223  --GKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHGRTSNLVEFLIHLPRIQRLEIQSYF 280

Query: 545  IEFLSMDQEFLAGVPSSCCSLKHLHVDM-FASEKHAQVITLLSRSYPNLQTL 393
            +++L++       +P+ C  L +L + + F   K       L RS PNL+ L
Sbjct: 281  LKYLALG-AVPVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLREL 331


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 660

 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 67/292 (22%), Positives = 125/292 (42%), Gaps = 2/292 (0%)
 Frame = -3

Query: 1262 SSRALLVPMDFRDFVDETLLSHNGSDIKSFSLTVKLGDTFVSSCHLNSWISFAVKHNVQD 1083
            S   L++       +D  LL H+G  IK F L+ +     +    ++ W     +  V++
Sbjct: 302  SEDLLVIKSKLSRIIDHVLLLHSGP-IKKFKLSHR---ELIGVTDIDRWTLHLTRRPVKE 357

Query: 1082 FKFSSYTHEIEKLPQCLFXXXXXXXXXLYSVVIKGPRNIK-FPMLKSLALLEVTINDENL 906
            F    +  +  K+P CLF         L++  +  P   + F  LKSL L  VT++ +  
Sbjct: 358  FVLEIWKGQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAF 417

Query: 905  VNSLLSSSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHLLDSNYPDINISNSVLRKLKY 726
             N +   STCP++E+L + +     N L+I  P L+        + DI            
Sbjct: 418  ENLI---STCPLLERLTL-MNFDGFNYLNIHAPNLQ--------FFDIG----------- 454

Query: 725  MCGKSPNLIYENLVSVVSAKLQFELDFSYYGGSMDSVSKCASKILVWLRNVEKLCLMSGF 546
              GK  ++ ++N   +    +   ++F    G +   +    + L+ L  +++L + S F
Sbjct: 455  --GKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHGRTSNLVEFLIHLPRIQRLEIQSYF 512

Query: 545  IEFLSMDQEFLAGVPSSCCSLKHLHVDM-FASEKHAQVITLLSRSYPNLQTL 393
            +++L++       +P+ C  L +L + + F   K       L RS PNL+ L
Sbjct: 513  LKYLALG-AVPVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLREL 563


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 69/293 (23%), Positives = 122/293 (41%), Gaps = 2/293 (0%)
 Frame = -3

Query: 1265 NSSRALLVPMDFRDFVDETLLSHNGSDIKSFSLTVKLGDTFVSSCHLNSWISFAVKHNVQ 1086
            +S    LV     + +D  LL H G  I  F L+ +    F+    ++ WI +  +  ++
Sbjct: 58   SSQDQTLVKNKLVNIIDHVLLLHTGP-IHKFRLSHR---DFLGGSDIDRWILYLSRTPIR 113

Query: 1085 DFKFSSYTHEIEKLPQCLFXXXXXXXXXLYSVVIKGPRNIK-FPMLKSLALLEVTINDEN 909
            +F    +  +  KLP CL+         L++ ++K P   K F  LKSL L  + +  + 
Sbjct: 114  EFILEIWKGQHYKLPSCLYNCQSLIHLELFNSLLKPPPTFKGFXSLKSLDLQHIIMAQDA 173

Query: 908  LVNSLLSSSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHLLDSNYPDINISNSVLRKLK 729
              N +   S+CP++EK  + +       L+I  P L+        Y D+N  N+ L    
Sbjct: 174  FENLI---SSCPLLEKFTL-MNFDGFTHLNIHAPNLQFFDTGGVFY-DVNFKNTFL---- 224

Query: 728  YMCGKSPNLIYENLVSVVSAKLQFELDFSYYGGSMDSVSKCASKILVWLRNVEKLCLMSG 549
                            + +  +   +D +      D  S+   K    L  +++L + S 
Sbjct: 225  ----------------LATVSIGLYVDITNDKNLADGNSRNLVKFFAHLPRIQRLEIQSY 268

Query: 548  FIEFLSMDQEFLAGVPSSCCSLKHLHVDM-FASEKHAQVITLLSRSYPNLQTL 393
            F+++L+        +P+ C  L HL + + F+S +       L RS PNLQ L
Sbjct: 269  FLKYLAAG-NVPGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQEL 320