BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007006
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200450.1| putative FBD-associated F-box protein [Arabidop...    57   2e-06
ref|NP_198675.2| FBD-associated F-box protein [Arabidopsis thali...    56   4e-06
ref|NP_974861.1| FBD-associated F-box protein [Arabidopsis thali...    56   4e-06
ref|XP_003610255.1| F-box/LRR-repeat protein [Medicago truncatul...    55   8e-06
ref|NP_001189735.1| F-box protein [Arabidopsis thaliana] gi|1222...    55   8e-06

>ref|NP_200450.1| putative FBD-associated F-box protein [Arabidopsis thaliana]
           gi|75262702|sp|Q9FM92.1|FBD22_ARATH RecName:
           Full=Putative FBD-associated F-box protein At5g56390
           gi|10177838|dbj|BAB11267.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009376|gb|AED96759.1|
           putative FBD-associated F-box protein [Arabidopsis
           thaliana]
          Length = 428

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = -1

Query: 222 TIVNFPVLKSLLLDDVTFLGENLVNKLLSSSSCPVLEKLVIWYCCCIDINTISISIPTLK 43
           T V+FP LK L L  V + G   VN L+SS  CPVLE LV+  C   ++  +++ +P+LK
Sbjct: 150 TPVSFPSLKRLRLKSVKYPGNEFVNNLISS--CPVLEDLVVKQCSDDNVTILTVRVPSLK 207

Query: 42  YLTLFDTHELNISI 1
            L+L    EL I +
Sbjct: 208 RLSLIQRAELEIDV 221


>ref|NP_198675.2| FBD-associated F-box protein [Arabidopsis thaliana]
           gi|33589724|gb|AAQ22628.1| At5g38590/MBB18_14
           [Arabidopsis thaliana] gi|332006956|gb|AED94339.1|
           FBD-associated F-box protein [Arabidopsis thaliana]
          Length = 289

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
 Frame = -1

Query: 525 VDFEETKKRKRGD--FRDFVDEMLSTHDGLDITRFSLNMKADDPFLYSRQLNSWISFAVK 352
           +D+     RK GD   RDF+ + L  H    I   SL   ++ P +    +  WI  AV 
Sbjct: 44  LDYTSRWCRKPGDVGLRDFIHKNLPLHRAPVIE--SLRFHSNSPDIKPEDIRRWIEIAVS 101

Query: 351 HNVRDFELSSYICRRRLKKLPQCXXXXXXXXXXXXXXXXXXLPTIVNFPVLKSLLLDDVT 172
            +V D ++  +     +  L                     +P++V  P LK+LLLD+V+
Sbjct: 102 RHVHDLDIDHFSENENIF-LSSFFACKSLVTLKLRSVTLRDIPSMVCLPSLKTLLLDNVS 160

Query: 171 FLGENLVNKLLSSSSCPVLEKLVIWYCCCIDINTISISIPTLKYLTLF 28
           F+    + +LL  S CPVLE L ++     +   ++I +P+L  L+L+
Sbjct: 161 FVEGKSLQELL--SICPVLEDLSVYCDDYENTKELTIVVPSLLSLSLY 206


>ref|NP_974861.1| FBD-associated F-box protein [Arabidopsis thaliana]
           gi|75262402|sp|Q9FFW2.1|FBD17_ARATH RecName:
           Full=FBD-associated F-box protein At5g38590
           gi|10176827|dbj|BAB10149.1| unnamed protein product
           [Arabidopsis thaliana] gi|332006955|gb|AED94338.1|
           FBD-associated F-box protein [Arabidopsis thaliana]
          Length = 410

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
 Frame = -1

Query: 525 VDFEETKKRKRGD--FRDFVDEMLSTHDGLDITRFSLNMKADDPFLYSRQLNSWISFAVK 352
           +D+     RK GD   RDF+ + L  H    I   SL   ++ P +    +  WI  AV 
Sbjct: 44  LDYTSRWCRKPGDVGLRDFIHKNLPLHRAPVIE--SLRFHSNSPDIKPEDIRRWIEIAVS 101

Query: 351 HNVRDFELSSYICRRRLKKLPQCXXXXXXXXXXXXXXXXXXLPTIVNFPVLKSLLLDDVT 172
            +V D ++  +     +  L                     +P++V  P LK+LLLD+V+
Sbjct: 102 RHVHDLDIDHFSENENIF-LSSFFACKSLVTLKLRSVTLRDIPSMVCLPSLKTLLLDNVS 160

Query: 171 FLGENLVNKLLSSSSCPVLEKLVIWYCCCIDINTISISIPTLKYLTLF 28
           F+    + +LL  S CPVLE L ++     +   ++I +P+L  L+L+
Sbjct: 161 FVEGKSLQELL--SICPVLEDLSVYCDDYENTKELTIVVPSLLSLSLY 206


>ref|XP_003610255.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355511310|gb|AES92452.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 392

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
 Frame = -1

Query: 462 LSTHDGLDITRFSLNMKADDPFLYSRQLNSWISFAVKHNVRDFELSSYICRRRLKKLPQC 283
           L  H    I R  + ++  D +  + ++N  +S+A+KH V D +LS      R K     
Sbjct: 55  LLLHKSNHIERLCIKVQGIDIY-DAWKVNILLSYALKHKVLDLKLSLNFIDSRFKLPHNF 113

Query: 282 XXXXXXXXXXXXXXXXXXLPTIVNFPVLKSLLLDDVTFLGENLVNKLLSSSSCPVLEKLV 103
                             +P  + FP LK+L L  ++F  E    +LLS   CP+LE+L 
Sbjct: 114 SSSHSLNKLYLESGVHMFIPDGICFPNLKTLYLSRLSFNNEMSAQRLLSG--CPILEELT 171

Query: 102 IWYCCCIDINTISISI-------PTLKYLTLFDT 22
           ++ C  ++IN I +SI       P +KY+ +  T
Sbjct: 172 LYKCIWVNINQICVSISKFCTSNPAIKYILVKPT 205


>ref|NP_001189735.1| F-box protein [Arabidopsis thaliana]
           gi|122223784|sp|Q0WR05.1|FBL39_ARATH RecName:
           Full=F-box/LRR-repeat protein At2g42730
           gi|110736977|dbj|BAF00444.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255068|gb|AEC10162.1| F-box
           protein [Arabidopsis thaliana]
          Length = 457

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 7/190 (3%)
 Frame = -1

Query: 549 LSNLKFDQVDFEETKKRKR----GDFRDFVDEMLSTHDGLDITRFSLNMKAD-DPFLYSR 385
           +SNL  D        K+ R     ++  FVD++L T  G  I + +L           S 
Sbjct: 44  VSNLDIDDRQSVPKTKQNRIEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSS 103

Query: 384 QLNSWISFAVKHNVRDFELSSYICRRRLKKLPQCXXXXXXXXXXXXXXXXXXLPTIVNFP 205
           ++ SWI   + H V D ++   +  +                          L   V+ P
Sbjct: 104 RIQSWICNVLDHGVMDLDVFITLKGKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLP 163

Query: 204 VLKSLLLDDVTFLG-ENLVNKLLSSSSCPVLEKLVIWYCCCIDINTISISIPTLKYLTL- 31
           +L++L LD V F+G  N+V  L+S   CPVLE+LV+    C+D  T S+S P+LK L + 
Sbjct: 164 LLRTLCLDSVNFVGGHNVVGTLISR--CPVLEELVVEERRCVDW-TCSVSSPSLKRLHIR 220

Query: 30  FDTHELNISI 1
           FD    +IS+
Sbjct: 221 FDRKFTSISL 230