BLASTX nr result

ID: Coptis23_contig00007003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007003
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634633.1| PREDICTED: transcription factor TGA4-like [V...   184   4e-44
ref|XP_002537773.1| conserved hypothetical protein [Ricinus comm...   182   2e-43
ref|XP_004134926.1| PREDICTED: transcription factor TGA1-like [C...   154   5e-35
ref|XP_002870029.1| hypothetical protein ARALYDRAFT_329668 [Arab...   152   1e-34
ref|XP_004161213.1| PREDICTED: uncharacterized LOC101207776 [Cuc...   152   2e-34

>ref|XP_003634633.1| PREDICTED: transcription factor TGA4-like [Vitis vinifera]
          Length = 246

 Score =  184 bits (467), Expect = 4e-44
 Identities = 97/233 (41%), Positives = 144/233 (61%)
 Frame = +3

Query: 93  FSCCFQNWMVQQEEDLTQLVQGMNQDFNKDEKLRLLVETSIKHFEEYHKKRLAYARXXXX 272
           F CCFQ+W+ QQ +DL +L+Q ++ D    + LR L++ S++HF++Y   R   ++    
Sbjct: 9   FHCCFQDWINQQHQDLQELLQVLDTDSPDSDHLRHLIQKSLQHFQDYSATRAELSKLDAP 68

Query: 273 XXXXXXXXXXXENSYLWIAGCRPSLYIRLVHTLCGSNIESQLGEFLQGVRKGKLSELSAE 452
                      ENS+LW+ GCRPSL IRL++++ GS +++QL +FL+G  +G L+++SA 
Sbjct: 69  SFFCPSWITSFENSFLWLGGCRPSLAIRLLYSISGSELQAQLPDFLKGCTRGNLADISAT 128

Query: 453 QLGLIEDLQRRTVRNEDNLSTEMASMQEEMADNILVQMTSKYGQETAEFSDREVNGILDS 632
           QL  I  L    VR ED LS+ MASMQE+ AD  L  +  K  +   E+S R VN  +++
Sbjct: 129 QLISINALHGWIVREEDRLSSRMASMQEDTADEPLAIIAKKL-RTVGEYS-RTVNSAIET 186

Query: 633 QELAWSNILEKADLLRLNTLKEIVNILRILQAVEFLIAGKKLHLSIHHWCNKR 791
              A + +LE+AD LRL+T K +  IL  LQ   FL+A KKLHLS+H W  +R
Sbjct: 187 HSQALARVLEEADKLRLSTFKGLQEILTPLQGAHFLVASKKLHLSMHEWGKQR 239


>ref|XP_002537773.1| conserved hypothetical protein [Ricinus communis]
           gi|223515136|gb|EEF24610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 255

 Score =  182 bits (462), Expect = 2e-43
 Identities = 99/250 (39%), Positives = 153/250 (61%), Gaps = 5/250 (2%)
 Frame = +3

Query: 60  MANHEVHEQAQFSCCFQNWMVQQEEDLTQLVQGM---NQDFNKDEK--LRLLVETSIKHF 224
           M+  +  +Q     CF +WM  QE DL +L++ +   + D   D++     L E +I+HF
Sbjct: 1   MSLEDQSDQNHSERCFHDWMNVQELDLAELLRALTLTDDDKPPDDQSLFAQLAEKNIEHF 60

Query: 225 EEYHKKRLAYARXXXXXXXXXXXXXXXENSYLWIAGCRPSLYIRLVHTLCGSNIESQLGE 404
           +EY  KR   A                ENS LW+AGCRPS++IRLV+ LCGS +ESQ+ E
Sbjct: 61  QEYVDKRNRLAHNDVSVYFAPTWNSALENSLLWLAGCRPSIFIRLVYALCGSQVESQIAE 120

Query: 405 FLQGVRKGKLSELSAEQLGLIEDLQRRTVRNEDNLSTEMASMQEEMADNILVQMTSKYGQ 584
            LQG R G L +LS +QL ++  L  +T+++E+ L+T++AS+QE++AD  +  +  +  Q
Sbjct: 121 HLQGTRTGNLGDLSLQQLNMVNVLHCKTIKHEEKLTTQLASLQEDIADEPISMVAKE--Q 178

Query: 585 ETAEFSDREVNGILDSQELAWSNILEKADLLRLNTLKEIVNILRILQAVEFLIAGKKLHL 764
             A  S+  V+  L + + A   +L++AD LRL TLKE+++IL  +QAV++L AG+KLHL
Sbjct: 179 SHAGDSNEVVDRALQNHDEAMVRLLQEADNLRLTTLKELISILTPVQAVDYLAAGRKLHL 238

Query: 765 SIHHWCNKRE 794
            +H W  KR+
Sbjct: 239 CMHEWGKKRD 248


>ref|XP_004134926.1| PREDICTED: transcription factor TGA1-like [Cucumis sativus]
           gi|449479532|ref|XP_004155627.1| PREDICTED:
           transcription factor TGA1-like [Cucumis sativus]
          Length = 263

 Score =  154 bits (389), Expect = 5e-35
 Identities = 88/249 (35%), Positives = 141/249 (56%), Gaps = 10/249 (4%)
 Frame = +3

Query: 81  EQAQFSCCFQNWMVQQEEDLTQLVQGMNQDFNK--------DEKLRLLVETSIKHFEEYH 236
           +QA    CF  WM  QE+   +L Q +    N+        + +L  LV+ SI+ F++Y 
Sbjct: 9   DQAASERCFLEWMKIQEDSQKELFQALKAIENRPNSNHEETERQLTQLVDKSIEQFQDYI 68

Query: 237 KKRLAYARXXXXXXXXXXXXXXXENSYLWIAGCRPSLYIRLVHTLCGSNIESQLGEFLQG 416
            +R+  A+               E S LWIAGCRPS++IRL ++L G  +E+++ EFLQG
Sbjct: 69  DRRMQLAKNDVSLFFAPVWCSTREASLLWIAGCRPSVFIRLAYSLTGYELETRMAEFLQG 128

Query: 417 VRKGK--LSELSAEQLGLIEDLQRRTVRNEDNLSTEMASMQEEMADNILVQMTSKYGQET 590
           ++  +    EL+ +Q+  ++ LQ RT++ E+ L++E+A +QEEMAD  +V +  +  +E 
Sbjct: 129 MKSMEELAGELTPQQMEQLDSLQMRTIKEEERLTSELARVQEEMADQTVVGIAMRSMKE- 187

Query: 591 AEFSDREVNGILDSQELAWSNILEKADLLRLNTLKEIVNILRILQAVEFLIAGKKLHLSI 770
            E    E+   L+ Q+     ++++AD LR+ TL E+  I R LQAV FL   KKLHLSI
Sbjct: 188 -EGGSEELERALEKQDGEMVRLIQQADKLRIRTLNELTEIFRPLQAVLFLAFSKKLHLSI 246

Query: 771 HHWCNKREK 797
             W  + ++
Sbjct: 247 REWGQRSDR 255


>ref|XP_002870029.1| hypothetical protein ARALYDRAFT_329668 [Arabidopsis lyrata subsp.
           lyrata] gi|297315865|gb|EFH46288.1| hypothetical protein
           ARALYDRAFT_329668 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  152 bits (385), Expect = 1e-34
 Identities = 91/259 (35%), Positives = 139/259 (53%), Gaps = 19/259 (7%)
 Frame = +3

Query: 102 CFQNWMVQQEEDLTQLVQGMNQDFNKDEKLRLLVETSIKHFEEYHKKRLAYARXXXXXXX 281
           C+  WM  Q + +T+L + ++     D+KLR L+ T+IK FE+Y  KR  ++        
Sbjct: 15  CYNEWMSLQAKRMTELKEALSTGEKDDDKLRDLIRTAIKDFEDYAGKRSEHSCRFSSNYF 74

Query: 282 XXXXXXXXENSYLWIAGCRPSLYIRLVHTLCGSNIESQLGEFLQ---------------- 413
                   EN+ LW+ GCRPS +IRLV+ +CGS  E +L  F                  
Sbjct: 75  APKWNTCLENALLWMGGCRPSSFIRLVYAMCGSQTEHRLSNFFNNTNEDIHGLSMALGET 134

Query: 414 --GVRKGK-LSELSAEQLGLIEDLQRRTVRNEDNLSTEMASMQEEMADNILVQMTSKYGQ 584
             G+  G+ +S+L+AEQ+  I +L  +T++ E+ L+   AS+QE+ AD  +    + + +
Sbjct: 135 RGGIGAGESMSDLTAEQIIKINELHLKTIKAENKLTKLSASLQEDTADMPIA--VAAFYK 192

Query: 585 ETAEFSDREVNGILDSQELAWSNILEKADLLRLNTLKEIVNILRILQAVEFLIAGKKLHL 764
           E    +D  V   LD  E   + +L +A+ LRL TL +IV+IL   QA EFL+AGKKLHL
Sbjct: 193 EVIGQADMAVERALDKHEEDMAGLLVQAEKLRLTTLTKIVDILTAGQAAEFLLAGKKLHL 252

Query: 765 SIHHWCNKREKGASTSQGG 821
           ++H W   RE     + GG
Sbjct: 253 AMHEWGRSREHRRIEASGG 271


>ref|XP_004161213.1| PREDICTED: uncharacterized LOC101207776 [Cucumis sativus]
          Length = 293

 Score =  152 bits (383), Expect = 2e-34
 Identities = 92/252 (36%), Positives = 134/252 (53%), Gaps = 12/252 (4%)
 Frame = +3

Query: 78  HEQAQFSCCFQNWMVQQEEDLTQLVQGMNQDFNKDEKLRL--LVETSIKHFEEYHKKRLA 251
           HE+    CCF+ WM  Q EDLT L++ ++Q  N D       ++   I HFE Y   R  
Sbjct: 31  HEERS-RCCFEEWMQLQREDLTHLLKSLHQPTNNDTTTTTTTVIRNCISHFEHYISNRTL 89

Query: 252 YARXXXXXXXXXXXXXXXENSYLWIAGCRPSLYIRLVHTLCGSNIESQLGEFLQGVRKG- 428
            A+               ENS LW+AGCRPS++IRL++ L   + E  +     G + G 
Sbjct: 90  LAQEHPSPLFAPTWCTSLENSLLWMAGCRPSIFIRLIYALTSCSSEPLITND-DGNKNGN 148

Query: 429 ----KLSELSAEQLGLIEDLQRRTVRNEDNLSTEMASMQEEMADNILVQMTSK--YGQET 590
                + ELS  Q+  +  L  RTV+ E+ L++E+AS QEE+AD  +  + +K   G E 
Sbjct: 149 NTVTSIGELSPSQMTRVNGLHMRTVKAEEKLTSELASWQEELADEPIALIAAKGDCGDEV 208

Query: 591 A--EFSDREVNGILDSQELAWSNILEKADLLRLNTLKEIV-NILRILQAVEFLIAGKKLH 761
                 + E    L   E     ++ KAD LRLNT+KE+V  IL+  QA++FL+A KKLH
Sbjct: 209 VLNNMMNEEAEMALKEHEKVMGKVIGKADELRLNTMKELVLEILKPTQALQFLVASKKLH 268

Query: 762 LSIHHWCNKREK 797
           LS+H W  +R++
Sbjct: 269 LSLHQWGKRRDE 280


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