BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007002
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297879.1| predicted protein [Populus trichocarpa] gi|2...   411   e-112
ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit R...   410   e-112
ref|XP_004143762.1| PREDICTED: cytochrome b-c1 complex subunit R...   404   e-110
ref|XP_002304638.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110
ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur...   404   e-110

>ref|XP_002297879.1| predicted protein [Populus trichocarpa] gi|222845137|gb|EEE82684.1|
            predicted protein [Populus trichocarpa]
          Length = 275

 Score =  411 bits (1057), Expect = e-112
 Identities = 206/267 (77%), Positives = 232/267 (86%), Gaps = 2/267 (0%)
 Frame = -1

Query: 1198 NQTAPAMISRNLINAGGDSSKDGDDY--NTRSIVVPFYGFNSRSDLFFFGSTRGFASDSL 1025
            +QT  A +SRN        S DG D   ++R I+ P Y F+   DL      RGF+S +L
Sbjct: 19   SQTTSAFVSRNTAFV----SDDGRDSAASSRPILSP-YQFSFPPDLI-----RGFSSGAL 68

Query: 1024 TSRPDTGMMPNIPPTVAAVQNPTSKIVYDDYNHERFPPGDPSKRAFAYFVLTGGRFVYAS 845
            TS  D G++ ++PPTVAAV+NPTSKIVYD++NHER+PPGDPSKRAFAYFVLTGGRFVYAS
Sbjct: 69   TSGHDMGIISDLPPTVAAVKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYAS 128

Query: 844  LIRLLILKFVLSMSASKDVLALASLEVDISSIEPGSTVTVKWRGKPVFIRRRTEDDIQLA 665
            LIRLL+LKFVLSMSASKDVLA+ASLEVD+SSIEPGSTVTVKWRGKPVFIRRRTEDDI+LA
Sbjct: 129  LIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLA 188

Query: 664  NSVDVATLRDPQEDAVRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISG 485
            NSVD+A+LRDPQEDA RVKNPEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISG
Sbjct: 189  NSVDLASLRDPQEDAARVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISG 248

Query: 484  RIRKGPAPYNLEVPTYSFLEDNKLLIG 404
            RIRKGPAPYNLEVPTYSF+E+NKLL+G
Sbjct: 249  RIRKGPAPYNLEVPTYSFMEENKLLVG 275


>ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2, mitochondrial
            [Vitis vinifera] gi|296085532|emb|CBI29264.3| unnamed
            protein product [Vitis vinifera]
          Length = 272

 Score =  410 bits (1055), Expect = e-112
 Identities = 200/246 (81%), Positives = 222/246 (90%)
 Frame = -1

Query: 1141 SKDGDDYNTRSIVVPFYGFNSRSDLFFFGSTRGFASDSLTSRPDTGMMPNIPPTVAAVQN 962
            S +G D ++RSI  P   FNS     F    RGF+S+SL    D GM+ ++PPTVAA++N
Sbjct: 32   SSNGGDGSSRSISSPHL-FNSE----FRDLIRGFSSESLAPSHDLGMISDLPPTVAALKN 86

Query: 961  PTSKIVYDDYNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLA 782
            PTSKIVYDD+NHERFPPGDPSKRAFAYFVLTGGRF+YASLIRLL+LKFVLSMSASKDVLA
Sbjct: 87   PTSKIVYDDHNHERFPPGDPSKRAFAYFVLTGGRFIYASLIRLLVLKFVLSMSASKDVLA 146

Query: 781  LASLEVDISSIEPGSTVTVKWRGKPVFIRRRTEDDIQLANSVDVATLRDPQEDAVRVKNP 602
            LAS+EVD+SSIEPGSTVTVKWRGKPVFIRRRTEDDI+LANSVDV +LRDPQEDAVRVK+P
Sbjct: 147  LASIEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDAVRVKDP 206

Query: 601  EWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLED 422
            EWLIV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYSFLE+
Sbjct: 207  EWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSFLEE 266

Query: 421  NKLLIG 404
            NKL+IG
Sbjct: 267  NKLMIG 272


>ref|XP_004143762.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
            mitochondrial-like [Cucumis sativus]
            gi|449516924|ref|XP_004165496.1| PREDICTED: cytochrome
            b-c1 complex subunit Rieske-2, mitochondrial-like
            [Cucumis sativus]
          Length = 274

 Score =  404 bits (1039), Expect = e-110
 Identities = 196/258 (75%), Positives = 226/258 (87%)
 Frame = -1

Query: 1177 ISRNLINAGGDSSKDGDDYNTRSIVVPFYGFNSRSDLFFFGSTRGFASDSLTSRPDTGMM 998
            +S N+I+     S D +D+ +      F+ F  R    F  ++RGFASD+LTS  +  ++
Sbjct: 27   LSHNIID-----STDSNDFRSAGF---FHTFPIRPH--FDRNSRGFASDALTSTKENNLV 76

Query: 997  PNIPPTVAAVQNPTSKIVYDDYNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKF 818
            P++P T+AAV+NPTSKIVYD+YNHERFPPGDPSKRAFAYFVL+GGRFVYASLIRLL+LKF
Sbjct: 77   PDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKF 136

Query: 817  VLSMSASKDVLALASLEVDISSIEPGSTVTVKWRGKPVFIRRRTEDDIQLANSVDVATLR 638
            VLSMSASKDVLALASLEVD+SSIEPG+TVTVKWRGKPVFIRRRTE+DI+LANSVD+ TLR
Sbjct: 137  VLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDIGTLR 196

Query: 637  DPQEDAVRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPY 458
            DPQ+D  RVK+PEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYD+SGRIRKGPAPY
Sbjct: 197  DPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPY 256

Query: 457  NLEVPTYSFLEDNKLLIG 404
            NLEVPTY+FLEDNKLLIG
Sbjct: 257  NLEVPTYTFLEDNKLLIG 274


>ref|XP_002304638.1| predicted protein [Populus trichocarpa] gi|222842070|gb|EEE79617.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  404 bits (1039), Expect = e-110
 Identities = 201/267 (75%), Positives = 233/267 (87%), Gaps = 2/267 (0%)
 Frame = -1

Query: 1198 NQTAPAMISRN--LINAGGDSSKDGDDYNTRSIVVPFYGFNSRSDLFFFGSTRGFASDSL 1025
            +QT  A +S+N   ++ G DS+      ++RSI+ P++  +   DL      RGF+S +L
Sbjct: 17   SQTTSAFVSQNSPFLSDGRDSAA-----SSRSILSPYH-LSFTPDLI-----RGFSSGAL 65

Query: 1024 TSRPDTGMMPNIPPTVAAVQNPTSKIVYDDYNHERFPPGDPSKRAFAYFVLTGGRFVYAS 845
            T   D G++ ++P TVAAV+NPTSKIVYD++NHER+PPGDPSKRAFAYFVLTGGRFVYAS
Sbjct: 66   TPGQDMGIISDLPATVAAVKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYAS 125

Query: 844  LIRLLILKFVLSMSASKDVLALASLEVDISSIEPGSTVTVKWRGKPVFIRRRTEDDIQLA 665
            LIRLL+LKFVLSMSASKDVLA+ASLEVD+SSIEPGSTVTVKWRGKPVFIRRRTEDDI+LA
Sbjct: 126  LIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLA 185

Query: 664  NSVDVATLRDPQEDAVRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISG 485
            NSVDVA+LRDPQEDA RVK+PEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISG
Sbjct: 186  NSVDVASLRDPQEDAARVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISG 245

Query: 484  RIRKGPAPYNLEVPTYSFLEDNKLLIG 404
            RIRKGPAP+NLEVPTYSFLE+NKLL+G
Sbjct: 246  RIRKGPAPFNLEVPTYSFLEENKLLVG 272


>ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
            [Ricinus communis] gi|223547839|gb|EEF49331.1|
            ubiquinol-cytochrome C reductase iron-sulfur subunit,
            putative [Ricinus communis]
          Length = 280

 Score =  404 bits (1038), Expect = e-110
 Identities = 205/266 (77%), Positives = 230/266 (86%), Gaps = 1/266 (0%)
 Frame = -1

Query: 1198 NQTAPAMI-SRNLINAGGDSSKDGDDYNTRSIVVPFYGFNSRSDLFFFGSTRGFASDSLT 1022
            NQ A + I SRN IN GGDSS   DD  ++ ++  ++ F  +    F    RGF+SDSL 
Sbjct: 22   NQAATSAIASRNPIN-GGDSSSS-DDVKSK-VLNDYFAFRPQ----FHIPHRGFSSDSLM 74

Query: 1021 SRPDTGMMPNIPPTVAAVQNPTSKIVYDDYNHERFPPGDPSKRAFAYFVLTGGRFVYASL 842
             + + G++  +P TVAA++NPT KIVYD+YNHERFPPGDPSKRAFAYFVLTGGRFVYASL
Sbjct: 75   PKNEDGIVSEVPATVAAIKNPTPKIVYDEYNHERFPPGDPSKRAFAYFVLTGGRFVYASL 134

Query: 841  IRLLILKFVLSMSASKDVLALASLEVDISSIEPGSTVTVKWRGKPVFIRRRTEDDIQLAN 662
            IRLLILK VLSMSASKDVLALASLEVD+SSIEPG+TVTVKWRGKPVFIRRRTEDDI+LAN
Sbjct: 135  IRLLILKLVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLAN 194

Query: 661  SVDVATLRDPQEDAVRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGR 482
            SV++A+LRDPQ DA RVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGR
Sbjct: 195  SVELASLRDPQPDADRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGR 254

Query: 481  IRKGPAPYNLEVPTYSFLEDNKLLIG 404
            IRKGPAPYNLEVPTYSFL++NKLLIG
Sbjct: 255  IRKGPAPYNLEVPTYSFLDENKLLIG 280