BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006999
         (1540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   405   e-110
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              405   e-110
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [...   404   e-110
ref|XP_002316405.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [...   397   e-108

>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  405 bits (1040), Expect = e-110
 Identities = 219/297 (73%), Positives = 246/297 (82%)
 Frame = -3

Query: 1235 HIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTSDRIIMISGAFDDII 1056
            +IRFLVSNAAAGSVIGKGGSTI +FQSQSGARIQLSRNHEFFPGTSDRIIMISGA ++II
Sbjct: 35   YIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEII 94

Query: 1055 KAMELIMSKLFSEVHSEDGDDSSDPRSKVRLIVPNSSCXXXXXXXGATIKSFIEESQAGI 876
            KAMELI++KL SE+H+EDGD++ DPRSKVRLIVPNSSC       G+TIKSFIE+SQA I
Sbjct: 95   KAMELILAKLLSEMHTEDGDEA-DPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASI 153

Query: 875  KISPQDHNYIGLSDRLVTLTGSLDEQMQAIVLILSKLTEDTHYMQSMTAPFTYAGVNFSG 696
            KISPQD+NY+GL+DRLVTL GSL+EQM+AI LILSKLTED HY Q M APF+YA      
Sbjct: 154  KISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYAAA---- 209

Query: 695  FHGVQYGYLVPPVGAVPYNAINYGPNGARGKFQINKEDRSSSVTIGVADEHIXXXXXXXX 516
                             YN++NYGPNGA GKFQ NKEDRS+SVTIGVADEHI        
Sbjct: 210  -----------------YNSMNYGPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGG 252

Query: 515  RNIMEINQASGARIKISDRGDFMSGTSDRKVTITGSQQAIRAAETMIMEKVASASER 345
            RNIM+I+QASGARIKISDRGDFMSGT+DRKVTITGSQ+AIRAAE+MIM+KVASASER
Sbjct: 253  RNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 309


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  405 bits (1040), Expect = e-110
 Identities = 219/297 (73%), Positives = 246/297 (82%)
 Frame = -3

Query: 1235 HIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTSDRIIMISGAFDDII 1056
            +IRFLVSNAAAGSVIGKGGSTI +FQSQSGARIQLSRNHEFFPGTSDRIIMISGA ++II
Sbjct: 83   YIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEII 142

Query: 1055 KAMELIMSKLFSEVHSEDGDDSSDPRSKVRLIVPNSSCXXXXXXXGATIKSFIEESQAGI 876
            KAMELI++KL SE+H+EDGD++ DPRSKVRLIVPNSSC       G+TIKSFIE+SQA I
Sbjct: 143  KAMELILAKLLSEMHTEDGDEA-DPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASI 201

Query: 875  KISPQDHNYIGLSDRLVTLTGSLDEQMQAIVLILSKLTEDTHYMQSMTAPFTYAGVNFSG 696
            KISPQD+NY+GL+DRLVTL GSL+EQM+AI LILSKLTED HY Q M APF+YA      
Sbjct: 202  KISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYAAA---- 257

Query: 695  FHGVQYGYLVPPVGAVPYNAINYGPNGARGKFQINKEDRSSSVTIGVADEHIXXXXXXXX 516
                             YN++NYGPNGA GKFQ NKEDRS+SVTIGVADEHI        
Sbjct: 258  -----------------YNSMNYGPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGG 300

Query: 515  RNIMEINQASGARIKISDRGDFMSGTSDRKVTITGSQQAIRAAETMIMEKVASASER 345
            RNIM+I+QASGARIKISDRGDFMSGT+DRKVTITGSQ+AIRAAE+MIM+KVASASER
Sbjct: 301  RNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 357


>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score =  404 bits (1038), Expect = e-110
 Identities = 209/298 (70%), Positives = 253/298 (84%), Gaps = 1/298 (0%)
 Frame = -3

Query: 1235 HIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTSDRIIMISGAFDDII 1056
            +IRFLVSN+AAGSVIGKGGSTIT+FQSQSGARIQLSRNHEFFPGT+DRIIM+SGA ++I 
Sbjct: 37   YIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQ 96

Query: 1055 KAMELIMSKLFSEVHSEDGDDSSDPRSKVRLIVPNSSCXXXXXXXGATIKSFIEESQAGI 876
            +A+ELI+SKL SE+HSED D+ ++P++KVRL+VPN SC       GATI+SFIE+SQAGI
Sbjct: 97   RAVELILSKLLSELHSED-DNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGI 155

Query: 875  KISPQDHNYIGLSDRLVTLTGSLDEQMQAIVLILSKLTEDTHYMQSMTAPFTYAGVNFSG 696
            KISPQD+NY G +DRLVTLTGS DEQM+AI LI+SKL+ED HY QSM +PF+Y GV FSG
Sbjct: 156  KISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSMNSPFSYPGVYFSG 215

Query: 695  FHGVQYGYLVPPVGAVPYNAINYGPNGAR-GKFQINKEDRSSSVTIGVADEHIXXXXXXX 519
            + GV Y Y++P V    YNA+NY PNGA  GK Q +KE+RS+S+T+GVADEHI       
Sbjct: 216  YQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMGVADEHIGLVVGRG 275

Query: 518  XRNIMEINQASGARIKISDRGDFMSGTSDRKVTITGSQQAIRAAETMIMEKVASASER 345
             RNIMEI+QASGARIKISDRGD++SGT+DRKVTITGSQ+AIR AE+MI++KVA A+ER
Sbjct: 276  GRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAYATER 333


>ref|XP_002316405.1| predicted protein [Populus trichocarpa] gi|222865445|gb|EEF02576.1|
            predicted protein [Populus trichocarpa]
          Length = 334

 Score =  402 bits (1034), Expect = e-109
 Identities = 207/299 (69%), Positives = 250/299 (83%)
 Frame = -3

Query: 1235 HIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTSDRIIMISGAFDDII 1056
            + RFLVSNAAAGSVIGKGG+TIT+FQSQSGARIQLSRN+EFFPGTSDRIIM+SG  DD++
Sbjct: 36   YTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVL 95

Query: 1055 KAMELIMSKLFSEVHSEDGDDSSDPRSKVRLIVPNSSCXXXXXXXGATIKSFIEESQAGI 876
            KA+ELI++KL SE+ +EDGD++ +PR +VRL+VPNS+C       G+ IKSFIEES AGI
Sbjct: 96   KAVELIIAKLLSEIPAEDGDEA-EPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGI 154

Query: 875  KISPQDHNYIGLSDRLVTLTGSLDEQMQAIVLILSKLTEDTHYMQSMTAPFTYAGVNFSG 696
            KISP D  + GL+DRLVT+TG+L+EQM AI LILSKLT+D HY Q+M APF+YAGV FSG
Sbjct: 155  KISPLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQTMHAPFSYAGVFFSG 214

Query: 695  FHGVQYGYLVPPVGAVPYNAINYGPNGARGKFQINKEDRSSSVTIGVADEHIXXXXXXXX 516
            F G+QY  ++P V    YN++N+GPNGA  KFQ NK+D ++SVTIGVADEHI        
Sbjct: 215  FDGIQYACVLPYVATAAYNSMNHGPNGAAVKFQHNKDDITNSVTIGVADEHIGLVVGRGG 274

Query: 515  RNIMEINQASGARIKISDRGDFMSGTSDRKVTITGSQQAIRAAETMIMEKVASASERET 339
            RNIMEI+Q SGAR+KISDRGDFMSGT+DRK+TITGSQ+AIRAAE MIM+KV+ ASERET
Sbjct: 275  RNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAEDMIMQKVSYASERET 333


>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score =  397 bits (1019), Expect = e-108
 Identities = 205/298 (68%), Positives = 249/298 (83%), Gaps = 1/298 (0%)
 Frame = -3

Query: 1235 HIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTSDRIIMISGAFDDII 1056
            +IRFLVSN+AAGSVIGKGGSTIT+FQSQSGARIQLSRNHEFFPGT+DRIIM+SGA ++I 
Sbjct: 37   YIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQ 96

Query: 1055 KAMELIMSKLFSEVHSEDGDDSSDPRSKVRLIVPNSSCXXXXXXXGATIKSFIEESQAGI 876
            +A+ELI+SKL SE+HSED D+ ++P++KVRL+VPN SC       G TI+SFIE+SQAGI
Sbjct: 97   RAVELILSKLLSELHSED-DNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGI 155

Query: 875  KISPQDHNYIGLSDRLVTLTGSLDEQMQAIVLILSKLTEDTHYMQSMTAPFTYAGVNFSG 696
            KISPQD+NY G +DRLV LTG+ DEQM+AI LI+SKL ED HY QSM +PF+Y GV FSG
Sbjct: 156  KISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQSMNSPFSYPGVYFSG 215

Query: 695  FHGVQYGYLVPPVGAVPYNAINYGPNG-ARGKFQINKEDRSSSVTIGVADEHIXXXXXXX 519
            + GV Y Y++P V    YNA+NY PNG A GK Q +KE+RS+S+T+GVADEHI       
Sbjct: 216  YQGVPYTYVLPSVAPPAYNAVNYRPNGTAGGKLQNSKEERSNSLTMGVADEHIGLVVGRG 275

Query: 518  XRNIMEINQASGARIKISDRGDFMSGTSDRKVTITGSQQAIRAAETMIMEKVASASER 345
             RNIMEI+Q SGARIKISDRGD++SGT+DRKVTITGSQ+AIR AE+MI++KVA A+ER
Sbjct: 276  GRNIMEISQVSGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATER 333