BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006994
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo...   167   2e-39
gb|AFK45150.1| unknown [Lotus japonicus]                              162   7e-38
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo...   161   9e-38
ref|XP_004146017.1| PREDICTED: LOW QUALITY PROTEIN: probable sma...   161   1e-37
ref|XP_002325051.1| predicted protein [Populus trichocarpa] gi|2...   160   2e-37

>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
           vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
           product [Vitis vinifera]
          Length = 88

 Score =  167 bits (422), Expect = 2e-39
 Identities = 78/86 (90%), Positives = 84/86 (97%)
 Frame = -1

Query: 660 SVPVNPKPFLNTLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 481
           +VP+NPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN+EEYIDG+FTGNLGE
Sbjct: 3   TVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNLGE 62

Query: 480 ILIRCNNVLYLRGVPEDEDITEADRD 403
           ILIRCNNVLYLRGVPEDE+I EADRD
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIEEADRD 88


>gb|AFK45150.1| unknown [Lotus japonicus]
          Length = 88

 Score =  162 bits (409), Expect = 7e-38
 Identities = 75/86 (87%), Positives = 82/86 (95%)
 Frame = -1

Query: 660 SVPVNPKPFLNTLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 481
           ++PVNPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTGNLGE
Sbjct: 3   TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLGE 62

Query: 480 ILIRCNNVLYLRGVPEDEDITEADRD 403
           ILIRCNNVLYLRGVPEDE+I +A  D
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIEDAPED 88


>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
          Length = 88

 Score =  161 bits (408), Expect = 9e-38
 Identities = 75/86 (87%), Positives = 82/86 (95%)
 Frame = -1

Query: 660 SVPVNPKPFLNTLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 481
           ++PVNPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTGNLGE
Sbjct: 3   TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLGE 62

Query: 480 ILIRCNNVLYLRGVPEDEDITEADRD 403
           ILIRCNNVLYLRGVPEDE+I +A  D
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIEDAAED 88


>ref|XP_004146017.1| PREDICTED: LOW QUALITY PROTEIN: probable small nuclear
           ribonucleoprotein F-like [Cucumis sativus]
           gi|449503654|ref|XP_004162110.1| PREDICTED: LOW QUALITY
           PROTEIN: probable small nuclear ribonucleoprotein F-like
           [Cucumis sativus]
          Length = 88

 Score =  161 bits (407), Expect = 1e-37
 Identities = 75/86 (87%), Positives = 83/86 (96%)
 Frame = -1

Query: 660 SVPVNPKPFLNTLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 481
           S+PVNPKPFLN LTGK V+VKLKWGMEYKG+LVSVDSYMNLQLANTEEYIDG+FTG+LGE
Sbjct: 3   SIPVNPKPFLNNLTGKTVVVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQFTGSLGE 62

Query: 480 ILIRCNNVLYLRGVPEDEDITEADRD 403
           ILIRCNNVLYLRGVPEDE+I +A+RD
Sbjct: 63  ILIRCNNVLYLRGVPEDEEIEDAERD 88


>ref|XP_002325051.1| predicted protein [Populus trichocarpa] gi|222866485|gb|EEF03616.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score =  160 bits (406), Expect = 2e-37
 Identities = 75/86 (87%), Positives = 81/86 (94%)
 Frame = -1

Query: 660 SVPVNPKPFLNTLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 481
           +VPVNPKPFLN LTGK V+VKLKWGMEYKG+L SVDSYMNLQL NTEEYIDG+FTGNLGE
Sbjct: 3   TVPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQFTGNLGE 62

Query: 480 ILIRCNNVLYLRGVPEDEDITEADRD 403
           ILIRCNNVLYLRGVPEDEDI +A+RD
Sbjct: 63  ILIRCNNVLYLRGVPEDEDIEDAERD 88