BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006951
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530528.1| conserved hypothetical protein [Ricinus comm...   213   4e-53
ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-...   211   1e-52
ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-...   211   1e-52
ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vi...   209   5e-52
emb|CAN83896.1| hypothetical protein VITISV_015276 [Vitis vinifera]   209   5e-52

>ref|XP_002530528.1| conserved hypothetical protein [Ricinus communis]
           gi|223529932|gb|EEF31860.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  213 bits (541), Expect = 4e-53
 Identities = 103/191 (53%), Positives = 141/191 (73%), Gaps = 4/191 (2%)
 Frame = +3

Query: 126 TMDEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTW 305
           T++ G  + +IS++H DI+ TH+LTRLDGP LASTSC S++L++LS+  +LW+N+C STW
Sbjct: 12  TVESGGCSATISTVHQDILQTHILTRLDGPALASTSCTSTELNSLSSQRSLWSNLCSSTW 71

Query: 306 PSTDNPRIRQFISNFPNGPRSFFSKSFPLLISNPDPPSQNLNPPSQT--QELISAVDIHY 479
           PST++PR+R+ IS+FP GPRSFFS  FPL+I      S ++NP + +   E+ISAVDIHY
Sbjct: 72  PSTNSPRVREIISSFPGGPRSFFSSCFPLIIH-----SNSINPSTASFPSEIISAVDIHY 126

Query: 480 QGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSI--AQKRDTCRDLFEELRLSWI 653
           + + IFS+V E ET S WF+CSPFRID+LDPKD   T I   Q  +    L +EL L+WI
Sbjct: 127 KNELIFSRVVETETESSWFKCSPFRIDMLDPKDTCQTVIPRPQNEEDHFALADELTLTWI 186

Query: 654 IINPVGKQAAN 686
           +I+P GK+A N
Sbjct: 187 LIDPAGKRAMN 197


>ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score =  211 bits (536), Expect = 1e-52
 Identities = 108/195 (55%), Positives = 134/195 (68%), Gaps = 10/195 (5%)
 Frame = +3

Query: 132 DEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTWPS 311
           D   A+TSIS +H DI+ TH+LTRLDGP LAS +C SS+LH L+ +  LW+ IC STWPS
Sbjct: 15  DVDAASTSISDIHPDILRTHILTRLDGPALASAACTSSELHRLTAEPKLWSAICHSTWPS 74

Query: 312 TDNPRIRQFISNFPNGPRSFFSKSFP-------LLISNPDPPSQNLNPPSQTQELISAVD 470
           T  PR+   IS FP+GPRSFFS S P          S+P  P+   +      ELISAVD
Sbjct: 75  TTTPRLHALISEFPDGPRSFFSDSLPRGSNHSETSTSSPTSPATYCHRRHLPPELISAVD 134

Query: 471 IHYQGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSI---AQKRDTCRDLFEELR 641
           I+Y+G+ IFSKV E ET SGWFRCSPFRID+LDPKDVVPT I     + + CR+L E+L 
Sbjct: 135 IYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVVPTPIKFPIGEGNACRELGEDLT 194

Query: 642 LSWIIINPVGKQAAN 686
           LSWI+I+  G++A N
Sbjct: 195 LSWIVIDGAGRRAMN 209


>ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score =  211 bits (536), Expect = 1e-52
 Identities = 108/195 (55%), Positives = 134/195 (68%), Gaps = 10/195 (5%)
 Frame = +3

Query: 132 DEGVATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTWPS 311
           D   A+TSIS +H DI+ TH+LTRLDGP LAS +C SS+LH L+ +  LW+ IC STWPS
Sbjct: 15  DVDAASTSISDIHPDILRTHILTRLDGPALASAACTSSELHRLTAEPKLWSAICHSTWPS 74

Query: 312 TDNPRIRQFISNFPNGPRSFFSKSFP-------LLISNPDPPSQNLNPPSQTQELISAVD 470
           T  PR+   IS FP+GPRSFFS S P          S+P  P+   +      ELISAVD
Sbjct: 75  TTTPRLHALISEFPDGPRSFFSDSLPRGSNHSETSTSSPTSPATYCHRRHLPPELISAVD 134

Query: 471 IHYQGKSIFSKVQEIETHSGWFRCSPFRIDLLDPKDVVPTSI---AQKRDTCRDLFEELR 641
           I+Y+G+ IFSKV E ET SGWFRCSPFRID+LDPKDVVPT I     + + CR+L E+L 
Sbjct: 135 IYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVVPTPIKFPIGEGNACRELGEDLT 194

Query: 642 LSWIIINPVGKQAAN 686
           LSWI+I+  G++A N
Sbjct: 195 LSWIVIDGAGRRAMN 209


>ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vinifera]
          Length = 342

 Score =  209 bits (531), Expect = 5e-52
 Identities = 105/184 (57%), Positives = 130/184 (70%), Gaps = 2/184 (1%)
 Frame = +3

Query: 141 VATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTWPSTDN 320
           V  + I++LH DI+ TH+LTRLDGPTLAS SCA ++LH LS   +LW  IC STWPST  
Sbjct: 15  VVQSGIAALHPDILETHILTRLDGPTLASASCADTKLHALSTQPDLWITICTSTWPSTST 74

Query: 321 PRIRQFISNFPNGPRSFFSKSFPLLISNPDPPSQNLNPPSQTQELISAVDIHYQGKSIFS 500
           PR+   +S+FP+GPRSFFS S+P+L       S N +P +    LISAVDI+Y  K I S
Sbjct: 75  PRLLHLMSSFPDGPRSFFSSSYPIL-HRCTNSSTNSDPSAPPVRLISAVDIYYNEKPIIS 133

Query: 501 KVQEIETHSGWFRCSPFRIDLLDPKDVVPTSIAQ--KRDTCRDLFEELRLSWIIINPVGK 674
           KVQE ET + WFRCSPFRID+LDPKDVVPTSI      DT R L E + LSWI+++  G+
Sbjct: 134 KVQETETATEWFRCSPFRIDVLDPKDVVPTSIQHPGDDDTSRKLGENISLSWIVMDTTGR 193

Query: 675 QAAN 686
           +AAN
Sbjct: 194 RAAN 197


>emb|CAN83896.1| hypothetical protein VITISV_015276 [Vitis vinifera]
          Length = 314

 Score =  209 bits (531), Expect = 5e-52
 Identities = 105/184 (57%), Positives = 130/184 (70%), Gaps = 2/184 (1%)
 Frame = +3

Query: 141 VATTSISSLHHDIINTHLLTRLDGPTLASTSCASSQLHTLSNDENLWTNICLSTWPSTDN 320
           V  + I++LH DI+ TH+LTRLDGPTLAS SCA ++LH LS   +LW  IC STWPST  
Sbjct: 15  VVQSGIAALHPDILETHILTRLDGPTLASASCADTKLHALSTQPDLWITICTSTWPSTST 74

Query: 321 PRIRQFISNFPNGPRSFFSKSFPLLISNPDPPSQNLNPPSQTQELISAVDIHYQGKSIFS 500
           PR+   +S+FP+GPRSFFS S+P+L       S N +P +    LISAVDI+Y  K I S
Sbjct: 75  PRLLHLMSSFPDGPRSFFSSSYPIL-HRCTNSSTNSDPSAPPVRLISAVDIYYNEKPIIS 133

Query: 501 KVQEIETHSGWFRCSPFRIDLLDPKDVVPTSIAQ--KRDTCRDLFEELRLSWIIINPVGK 674
           KVQE ET + WFRCSPFRID+LDPKDVVPTSI      DT R L E + LSWI+++  G+
Sbjct: 134 KVQETETATEWFRCSPFRIDVLDPKDVVPTSIQHPGDDDTSRKLGENISLSWIVMDTTGR 193

Query: 675 QAAN 686
           +AAN
Sbjct: 194 RAAN 197