BLASTX nr result

ID: Coptis23_contig00006938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006938
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238508.1| uncharacterized protein LOC100305648 [Glycin...   235   1e-59
gb|AFK49171.1| unknown [Lotus japonicus]                              233   5e-59
ref|NP_001238488.1| uncharacterized protein LOC100499695 [Glycin...   231   2e-58
ref|XP_002279539.1| PREDICTED: probable signal peptidase complex...   228   2e-57
gb|AFK45880.1| unknown [Medicago truncatula]                          226   5e-57

>ref|NP_001238508.1| uncharacterized protein LOC100305648 [Glycine max]
           gi|255626189|gb|ACU13439.1| unknown [Glycine max]
          Length = 184

 Score =  235 bits (600), Expect = 1e-59
 Identities = 121/174 (69%), Positives = 132/174 (75%)
 Frame = -2

Query: 827 LLDQNAIKNILDESISEIVKSRGYPEDVKLSNVKXXXXXXXXXXXXIAQFYPKKFPENKD 648
           LLD ++IK+ILDES+SE+V SRGY EDV+LSN +             AQFY KKFPEN+D
Sbjct: 11  LLDHHSIKHILDESVSEVVTSRGYVEDVRLSNARLFIGAIIIVIALFAQFYKKKFPENRD 70

Query: 647 VLIACIVLYVIFNGLLQLIIYTKEKNAILFTLPPTGSFNSTGLVISSKLPRFSDMYTLXX 468
            LIACI LYVIFNGLLQLIIYTKEKNAILFT PP GSF STGLV+SSKLPRFSDMYTL  
Sbjct: 71  FLIACIALYVIFNGLLQLIIYTKEKNAILFTYPPVGSFTSTGLVVSSKLPRFSDMYTLTI 130

Query: 467 XXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLFWKDVNGLINQYTGESSKNK 306
                   SA +PV FTKSVT+WFTKDGILVEGLFWKDV  LI QYT E  K K
Sbjct: 131 ASADPKSISANEPVHFTKSVTQWFTKDGILVEGLFWKDVEALIVQYTKEPKKGK 184


>gb|AFK49171.1| unknown [Lotus japonicus]
          Length = 184

 Score =  233 bits (594), Expect = 5e-59
 Identities = 119/174 (68%), Positives = 132/174 (75%)
 Frame = -2

Query: 827 LLDQNAIKNILDESISEIVKSRGYPEDVKLSNVKXXXXXXXXXXXXIAQFYPKKFPENKD 648
           LLD N+IK+ILDES+SEIV SRGY EDV+LSNV+             AQFY KKFPEN+D
Sbjct: 11  LLDHNSIKHILDESVSEIVTSRGYVEDVRLSNVRLLVGTVIIVIALFAQFYKKKFPENRD 70

Query: 647 VLIACIVLYVIFNGLLQLIIYTKEKNAILFTLPPTGSFNSTGLVISSKLPRFSDMYTLXX 468
            L+ACI LYVIFNG+LQLIIYTKEKNAILFT PP GSF STGLV+SSKLPRFSDMYTL  
Sbjct: 71  FLLACIALYVIFNGVLQLIIYTKEKNAILFTYPPAGSFTSTGLVVSSKLPRFSDMYTLTI 130

Query: 467 XXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLFWKDVNGLINQYTGESSKNK 306
                   SA +P   TKSVT+WFTKDG+LVEGLFWKDV  LI QYT E  K+K
Sbjct: 131 ASADPKSISANEPKHLTKSVTQWFTKDGVLVEGLFWKDVEALIAQYTKEPKKSK 184


>ref|NP_001238488.1| uncharacterized protein LOC100499695 [Glycine max]
           gi|255625849|gb|ACU13269.1| unknown [Glycine max]
          Length = 184

 Score =  231 bits (590), Expect = 2e-58
 Identities = 119/174 (68%), Positives = 132/174 (75%)
 Frame = -2

Query: 827 LLDQNAIKNILDESISEIVKSRGYPEDVKLSNVKXXXXXXXXXXXXIAQFYPKKFPENKD 648
           LLD ++IK+ILDES+SE+V SRG+ EDV+LSNV+             AQFY KKFPEN+D
Sbjct: 11  LLDHHSIKHILDESVSEVVTSRGFVEDVRLSNVRLLIGAIIIVIALFAQFYKKKFPENRD 70

Query: 647 VLIACIVLYVIFNGLLQLIIYTKEKNAILFTLPPTGSFNSTGLVISSKLPRFSDMYTLXX 468
            LIACI LYVIFNGLLQLIIYTKEKNAILFT PP GSF STGLV+SSKLPRFSDMYTL  
Sbjct: 71  FLIACIALYVIFNGLLQLIIYTKEKNAILFTYPPVGSFTSTGLVVSSKLPRFSDMYTLTI 130

Query: 467 XXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLFWKDVNGLINQYTGESSKNK 306
                   SA   V FTKSVT+WFTKDG+LVEGLFWKDV  LI QYT E  K+K
Sbjct: 131 AGADPKSISANDQVHFTKSVTQWFTKDGVLVEGLFWKDVEALIVQYTKEPKKSK 184


>ref|XP_002279539.1| PREDICTED: probable signal peptidase complex subunit 2 isoform 1
           [Vitis vinifera] gi|296086093|emb|CBI31534.3| unnamed
           protein product [Vitis vinifera]
          Length = 195

 Score =  228 bits (580), Expect = 2e-57
 Identities = 117/179 (65%), Positives = 134/179 (74%), Gaps = 5/179 (2%)
 Frame = -2

Query: 827 LLDQNAIKNILDESISEIVKSRGYPEDVKLSNVKXXXXXXXXXXXXIAQFYPKKFPENKD 648
           LLD ++IK+ILDE +SEIV SRGY EDV++SNV+            +AQFYPKKFPEN+D
Sbjct: 17  LLDHHSIKHILDEYVSEIVTSRGYVEDVRMSNVRLLMGSIIIIIALVAQFYPKKFPENRD 76

Query: 647 VLIACIVLY-----VIFNGLLQLIIYTKEKNAILFTLPPTGSFNSTGLVISSKLPRFSDM 483
            LI CI+LY     ++FNGLLQLIIYTKEKNAILFT PP G FNSTGLV+SSKLPRFSD+
Sbjct: 77  FLIVCILLYPFCCYILFNGLLQLIIYTKEKNAILFTHPPEGFFNSTGLVVSSKLPRFSDL 136

Query: 482 YTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLFWKDVNGLINQYTGESSKNK 306
           YTL          +A  PV+FTKSVT+WFT DGILVEGLFWKDV GLIN Y  E  KNK
Sbjct: 137 YTLSIASADPKSKAAKDPVEFTKSVTQWFTTDGILVEGLFWKDVEGLINDYAREPKKNK 195


>gb|AFK45880.1| unknown [Medicago truncatula]
          Length = 184

 Score =  226 bits (577), Expect = 5e-57
 Identities = 114/174 (65%), Positives = 131/174 (75%)
 Frame = -2

Query: 827 LLDQNAIKNILDESISEIVKSRGYPEDVKLSNVKXXXXXXXXXXXXIAQFYPKKFPENKD 648
           LLD ++IK+ILDES SE++  RGY EDVKLSN++             AQFY KKFPEN+D
Sbjct: 11  LLDHHSIKHILDESASEVITGRGYVEDVKLSNIRLLLGSVIIVIALFAQFYKKKFPENRD 70

Query: 647 VLIACIVLYVIFNGLLQLIIYTKEKNAILFTLPPTGSFNSTGLVISSKLPRFSDMYTLXX 468
            L+ACI LYV+FN +LQLIIYTKEKNAILFT PPTGSF STGLV+SSKLPRFSDMYTL  
Sbjct: 71  FLLACIALYVVFNLVLQLIIYTKEKNAILFTYPPTGSFTSTGLVVSSKLPRFSDMYTLTI 130

Query: 467 XXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLFWKDVNGLINQYTGESSKNK 306
                   SA +PV  TKSVT+WFTKDG+LVEGLFWK+V  LI QYT E  K+K
Sbjct: 131 ESADPKSVSANEPVHLTKSVTQWFTKDGVLVEGLFWKEVEALIAQYTKEPKKSK 184


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