BLASTX nr result

ID: Coptis23_contig00006937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006937
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cu...   253   6e-65
ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis v...   250   4e-64
ref|XP_004144766.1| PREDICTED: importin subunit alpha-1-like [Cu...   248   1e-63
ref|XP_003521670.1| PREDICTED: importin subunit alpha-1-like [Gl...   247   2e-63
ref|XP_002330241.1| predicted protein [Populus trichocarpa] gi|2...   246   4e-63

>ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cucumis sativus]
           gi|449501502|ref|XP_004161385.1| PREDICTED: importin
           subunit alpha-1-like [Cucumis sativus]
          Length = 530

 Score =  253 bits (645), Expect = 6e-65
 Identities = 126/171 (73%), Positives = 135/171 (78%)
 Frame = -2

Query: 919 CWTISNITAGNKXXXXXXXXXXXIGPLVHLLQTAEFDIKKEAAWALSNATSGGDPNQIKY 740
           CWTISNITAGNK           I PLV+LLQ AEFDIKKEAAWA+SNATSGG   QIKY
Sbjct: 348 CWTISNITAGNKEQIQAVIEARLIPPLVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKY 407

Query: 739 LVDRGCIRPLCDLLVCPDPRIVTVCLEGLENILKSGETEKNMGKNGGVNLYAQLVEDAEG 560
           LV +GCI+PLCDLLVCPDPRIVTVCLEGLENILK GE EKN+G NG VNLYAQ+++DAEG
Sbjct: 408 LVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGTNGDVNLYAQMIDDAEG 467

Query: 559 LEKIENLQSHDNTEIYEKAVKLLETYWLXXXXXXXXXXXXXAQPGFHFGGN 407
           LEKIENLQSHDN EIYEKAVK+LETYWL             AQPGF FGGN
Sbjct: 468 LEKIENLQSHDNHEIYEKAVKILETYWLEEEDEALPATDGGAQPGFRFGGN 518


>ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
           gi|296083287|emb|CBI22923.3| unnamed protein product
           [Vitis vinifera]
          Length = 529

 Score =  250 bits (638), Expect = 4e-64
 Identities = 126/176 (71%), Positives = 135/176 (76%)
 Frame = -2

Query: 919 CWTISNITAGNKXXXXXXXXXXXIGPLVHLLQTAEFDIKKEAAWALSNATSGGDPNQIKY 740
           CWTISNITAGNK           I PLVHLLQTAEFDIKKEAAWA+SNATSGG   QIKY
Sbjct: 348 CWTISNITAGNKEQIQAVIEAGVIAPLVHLLQTAEFDIKKEAAWAISNATSGGTHEQIKY 407

Query: 739 LVDRGCIRPLCDLLVCPDPRIVTVCLEGLENILKSGETEKNMGKNGGVNLYAQLVEDAEG 560
           LV +GCI+PLCDLLVCPDPRIVTVCLEGLENILK GE EK +G +G VN YAQL++DAEG
Sbjct: 408 LVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKTLGNSGDVNYYAQLIDDAEG 467

Query: 559 LEKIENLQSHDNTEIYEKAVKLLETYWLXXXXXXXXXXXXXAQPGFHFGGNGDEPP 392
           LEKIENLQSHDN EIYEKAVK+LETYWL             +QPGF FGGN    P
Sbjct: 468 LEKIENLQSHDNNEIYEKAVKILETYWL-EEEDETLPSGDGSQPGFQFGGNDVSVP 522


>ref|XP_004144766.1| PREDICTED: importin subunit alpha-1-like [Cucumis sativus]
          Length = 529

 Score =  248 bits (633), Expect = 1e-63
 Identities = 123/171 (71%), Positives = 135/171 (78%)
 Frame = -2

Query: 919 CWTISNITAGNKXXXXXXXXXXXIGPLVHLLQTAEFDIKKEAAWALSNATSGGDPNQIKY 740
           CWTISNITAGNK           + PLVHLLQ AEFDIKKEAAWA+SNATSGG  +QIKY
Sbjct: 348 CWTISNITAGNKAQIQAVIDANIVAPLVHLLQNAEFDIKKEAAWAISNATSGGSHDQIKY 407

Query: 739 LVDRGCIRPLCDLLVCPDPRIVTVCLEGLENILKSGETEKNMGKNGGVNLYAQLVEDAEG 560
           LV++GCI+PLCDLL+CPDPRIVTVCLEGLENILK GE EKN    GGVNLYAQL++DAEG
Sbjct: 408 LVNQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEAEKNTTNTGGVNLYAQLIDDAEG 467

Query: 559 LEKIENLQSHDNTEIYEKAVKLLETYWLXXXXXXXXXXXXXAQPGFHFGGN 407
           LEKIENLQSHDNTEIYEKAVK+LETYWL              Q GF+FGG+
Sbjct: 468 LEKIENLQSHDNTEIYEKAVKILETYWL-EEEDETMPPGTDPQAGFNFGGD 517


>ref|XP_003521670.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 532

 Score =  247 bits (631), Expect = 2e-63
 Identities = 124/179 (69%), Positives = 137/179 (76%)
 Frame = -2

Query: 919 CWTISNITAGNKXXXXXXXXXXXIGPLVHLLQTAEFDIKKEAAWALSNATSGGDPNQIKY 740
           CWTISNITAGNK           I PLVHLLQ AEFDIKKEAAWA+SNATSGG   QIK+
Sbjct: 350 CWTISNITAGNKKQIQDVIEASIIAPLVHLLQNAEFDIKKEAAWAISNATSGGSHEQIKF 409

Query: 739 LVDRGCIRPLCDLLVCPDPRIVTVCLEGLENILKSGETEKNMGKNGGVNLYAQLVEDAEG 560
           LV +GCIRPLCDLL+CPDPRIVTVCLEGLENILK GE EKN+    GVNLYAQ+++DAEG
Sbjct: 410 LVSQGCIRPLCDLLICPDPRIVTVCLEGLENILKVGEAEKNVSNTDGVNLYAQMIDDAEG 469

Query: 559 LEKIENLQSHDNTEIYEKAVKLLETYWLXXXXXXXXXXXXXAQPGFHFGGNGDEPPPAP 383
           LEKIENLQSHDNTEIYEKAVK+LETYW+             +Q GF+FGG   +PP  P
Sbjct: 470 LEKIENLQSHDNTEIYEKAVKILETYWM-EEDDETMPPGDASQSGFNFGGT--QPPAVP 525


>ref|XP_002330241.1| predicted protein [Populus trichocarpa] gi|222871697|gb|EEF08828.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score =  246 bits (629), Expect = 4e-63
 Identities = 122/176 (69%), Positives = 136/176 (77%)
 Frame = -2

Query: 919 CWTISNITAGNKXXXXXXXXXXXIGPLVHLLQTAEFDIKKEAAWALSNATSGGDPNQIKY 740
           CWTISNITAGNK           IGPLVHLLQ AEFDIKKE+AWA+SNATSGG   QIKY
Sbjct: 348 CWTISNITAGNKEQIQAVIEANLIGPLVHLLQNAEFDIKKESAWAISNATSGGTHEQIKY 407

Query: 739 LVDRGCIRPLCDLLVCPDPRIVTVCLEGLENILKSGETEKNMGKNGGVNLYAQLVEDAEG 560
           LV +GCI+PLCDLL+CPDPRIVTVCLEGLENILK GE +KN+   GGVNLYAQ+++DAEG
Sbjct: 408 LVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKNVSDTGGVNLYAQMIDDAEG 467

Query: 559 LEKIENLQSHDNTEIYEKAVKLLETYWLXXXXXXXXXXXXXAQPGFHFGGNGDEPP 392
           LEKIENLQSHDN+EIYEKAVK+LETYWL             +Q GF FGG+    P
Sbjct: 468 LEKIENLQSHDNSEIYEKAVKILETYWL-EEDDETMPPGDASQSGFQFGGDAPAVP 522


Top