BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006905
         (1755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   730   0.0  
ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putativ...   730   0.0  
sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ...   730   0.0  
ref|NP_001142117.1| uncharacterized protein LOC100274281 [Zea ma...   723   0.0  
ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   717   0.0  

>ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
            sativus] gi|449476660|ref|XP_004154799.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
            sativus]
          Length = 505

 Score =  730 bits (1884), Expect = 0.0
 Identities = 357/410 (87%), Positives = 381/410 (92%)
 Frame = +1

Query: 4    EIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKAGFVEPTPIQAQGWPMALKG 183
            E+E YR +R+ITVEG+DVPKPV+ FRD+GFP+YVMQE+ KAGF EPTPIQ+QGWPMALKG
Sbjct: 77   EVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKG 136

Query: 184  RDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 363
            RDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAPTRELAVQIQQEATKFG
Sbjct: 137  RDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFG 196

Query: 364  SSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEAD 543
            +SSKIK+TC+YGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEAD
Sbjct: 197  ASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEAD 256

Query: 544  RMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQFLYNPYKVVIGSSDLKANH 723
            RMLDMGF+PQ++KIVSQIRPDRQTLYWSATWPKEVE LARQFLYNPYKV+IGS DLKANH
Sbjct: 257  RMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANH 316

Query: 724  AIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGCDQITRQLRMDGWPALSIHG 903
            AI QHV+IVSENQKY KLV L+EDIMDGSRIL+FMDTKKGCDQITRQLRMDGWPALSIHG
Sbjct: 317  AIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHG 376

Query: 904  DKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXX 1083
            DKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH      
Sbjct: 377  DKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTG 436

Query: 1084 XXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKMGRGVPPPPT 1233
                      FFTAANARFAKELI ILEEAGQKV+PELA MGRG PPPP+
Sbjct: 437  RAGAKGTAYTFFTAANARFAKELIGILEEAGQKVSPELAAMGRGAPPPPS 486


>ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 505

 Score =  730 bits (1884), Expect = 0.0
 Identities = 358/410 (87%), Positives = 383/410 (93%)
 Frame = +1

Query: 4    EIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKAGFVEPTPIQAQGWPMALKG 183
            E+E YR +R+ITVEG+DVPKPV+ FRD+GFP+YV++EV +AGFVEPTPIQAQGWPMALKG
Sbjct: 77   EVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVLEEVTRAGFVEPTPIQAQGWPMALKG 136

Query: 184  RDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 363
            RDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG
Sbjct: 137  RDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 196

Query: 364  SSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEAD 543
            +SS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESHHTNLRRVTYLVLDEAD
Sbjct: 197  ASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEAD 256

Query: 544  RMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQFLYNPYKVVIGSSDLKANH 723
            RMLDMGF+PQ++KIVSQIRPDRQTLYWSATWPKEVE LARQFLYNPYKVVIGS+DLKANH
Sbjct: 257  RMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVVIGSADLKANH 316

Query: 724  AIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGCDQITRQLRMDGWPALSIHG 903
            AI QHV+IVSENQKY KLV L+EDIMDGSRIL+FMDTKKGCDQITRQLRMDGWPALSIHG
Sbjct: 317  AIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHG 376

Query: 904  DKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXX 1083
            DKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVH      
Sbjct: 377  DKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTG 436

Query: 1084 XXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKMGRGVPPPPT 1233
                      FFTA+NARFAKELI ILEEAGQKV+PELA MGRG PPPP+
Sbjct: 437  RAGAKGTAYTFFTASNARFAKELISILEEAGQKVSPELAAMGRGAPPPPS 486


>sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 20
          Length = 494

 Score =  730 bits (1884), Expect = 0.0
 Identities = 359/409 (87%), Positives = 383/409 (93%)
 Frame = +1

Query: 1    EEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKAGFVEPTPIQAQGWPMALK 180
            EE+EAYR +R+ITVEG+DVPKPVREFRD+GFPEYV+QE+ KAGFVEPTPIQ+QGWPMAL+
Sbjct: 68   EEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALR 127

Query: 181  GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKF 360
            GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKF
Sbjct: 128  GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKF 187

Query: 361  GSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEA 540
            G+SSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESHHTNLRRVTYLVLDEA
Sbjct: 188  GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEA 247

Query: 541  DRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQFLYNPYKVVIGSSDLKAN 720
            DRMLDMGFEPQ+KKIVSQIRPDRQTLYWSATWPKEVE LAR FL++PYKV+IGS +LKAN
Sbjct: 248  DRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKAN 307

Query: 721  HAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGCDQITRQLRMDGWPALSIH 900
            HAI QHVEI+SE+QKY KLV+L+EDIMDGSRIL+FMDTKKGCDQITRQLRMDGWPALSIH
Sbjct: 308  HAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIH 367

Query: 901  GDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXX 1080
            GDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH     
Sbjct: 368  GDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRT 427

Query: 1081 XXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKMGRGVPPP 1227
                       FFTAANARFAK+LI ILEEAGQKV+PELA MGRG PPP
Sbjct: 428  GRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELANMGRGAPPP 476


>ref|NP_001142117.1| uncharacterized protein LOC100274281 [Zea mays]
            gi|194704910|gb|ACF86539.1| unknown [Zea mays]
            gi|194707190|gb|ACF87679.1| unknown [Zea mays]
            gi|414875847|tpg|DAA52978.1| TPA: putative DEAD-box
            ATP-dependent RNA helicase family protein [Zea mays]
          Length = 494

 Score =  723 bits (1866), Expect = 0.0
 Identities = 357/409 (87%), Positives = 380/409 (92%)
 Frame = +1

Query: 1    EEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKAGFVEPTPIQAQGWPMALK 180
            EE+EAYR +R+ITV+G+DVPKPVREFRD+GFPEYV+QE+ KAGFVEPTPIQ+QGWPMAL+
Sbjct: 68   EEVEAYRRRREITVDGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALR 127

Query: 181  GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKF 360
            GRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAPTRELAVQIQQEATKF
Sbjct: 128  GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKF 187

Query: 361  GSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEA 540
            G+SSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESHHTNLRRVTYLVLDEA
Sbjct: 188  GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEA 247

Query: 541  DRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQFLYNPYKVVIGSSDLKAN 720
            DRMLDMGFEPQ+KKIVSQIRPDRQTLYWSATWPKEVE LAR FL++PYKV IGS DLKAN
Sbjct: 248  DRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVTIGSEDLKAN 307

Query: 721  HAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGCDQITRQLRMDGWPALSIH 900
            HAI QHVEI+SE+QKY KLV+L+EDIMDGSRIL+FMDTKKGCDQ TRQLRMDGWPALSIH
Sbjct: 308  HAIVQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQTTRQLRMDGWPALSIH 367

Query: 901  GDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXX 1080
            GDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH     
Sbjct: 368  GDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRT 427

Query: 1081 XXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKMGRGVPPP 1227
                       FFTAANARFAKELI ILEEAGQKV+ ELA MGRG PPP
Sbjct: 428  GRAGAKGTAYTFFTAANARFAKELINILEEAGQKVSSELAAMGRGAPPP 476


>ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
            gi|297743075|emb|CBI35942.3| unnamed protein product
            [Vitis vinifera]
          Length = 506

 Score =  717 bits (1852), Expect = 0.0
 Identities = 352/411 (85%), Positives = 377/411 (91%)
 Frame = +1

Query: 1    EEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKAGFVEPTPIQAQGWPMALK 180
            +E+E YR +R+ITVEG+DVPKPV  FRD+G PEYVMQE+ KAGF EPTPIQAQGWPMALK
Sbjct: 77   KEVEQYRERREITVEGRDVPKPVMNFRDVGLPEYVMQEITKAGFAEPTPIQAQGWPMALK 136

Query: 181  GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKF 360
            GRD+IGIAETGSGKTLAYLLPAI+HVNAQPILAPGDGPIVLVLAPTRELAVQIQQEA KF
Sbjct: 137  GRDVIGIAETGSGKTLAYLLPAIIHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKF 196

Query: 361  GSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEA 540
            G+SS+IK+TCI+GGVPKGPQ+RDLQKGVEIVIATPGRLIDM+ESHHTNLRRVTYLVLDEA
Sbjct: 197  GASSRIKNTCIHGGVPKGPQIRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEA 256

Query: 541  DRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQFLYNPYKVVIGSSDLKAN 720
            DRMLDMGFEPQ++KIVSQIRPDRQTLYWSATWPKEVE LAR+FLYNP KVVIGS+DLKAN
Sbjct: 257  DRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPCKVVIGSADLKAN 316

Query: 721  HAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGCDQITRQLRMDGWPALSIH 900
            HAI QHVEIVSENQKY +LV L+EDIMDG RIL+FMDTKKGCDQITRQLRMDGWPALSIH
Sbjct: 317  HAIRQHVEIVSENQKYNRLVKLLEDIMDGGRILIFMDTKKGCDQITRQLRMDGWPALSIH 376

Query: 901  GDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXX 1080
            GDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVH     
Sbjct: 377  GDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRT 436

Query: 1081 XXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKMGRGVPPPPT 1233
                       FFTAANARFAKELI ILEEAGQ+V PELA MGRG PPPP+
Sbjct: 437  GRAGAKGTAYTFFTAANARFAKELITILEEAGQRVAPELAAMGRGAPPPPS 487