BLASTX nr result

ID: Coptis23_contig00006901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006901
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24628.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_002269854.1| PREDICTED: structural maintenance of chromos...   150   8e-35
gb|AFK40367.1| unknown [Lotus japonicus]                              149   2e-34
ref|XP_003542846.1| PREDICTED: structural maintenance of chromos...   149   2e-34
ref|XP_003540523.1| PREDICTED: structural maintenance of chromos...   149   2e-34

>emb|CBI24628.3| unnamed protein product [Vitis vinifera]
          Length = 1171

 Score =  150 bits (380), Expect = 8e-35
 Identities = 77/92 (83%), Positives = 79/92 (85%)
 Frame = +3

Query: 3    ELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVV 182
            ELSGGQR             FKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVV
Sbjct: 1077 ELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVV 1136

Query: 183  SLKEGMFNNANVLFRTKFVDGVSTVQRSVASK 278
            SLKEGMFNNANVLFRTKFVDGVSTVQR+VA+K
Sbjct: 1137 SLKEGMFNNANVLFRTKFVDGVSTVQRTVAAK 1168


>ref|XP_002269854.1| PREDICTED: structural maintenance of chromosomes protein 2-1 [Vitis
            vinifera]
          Length = 1176

 Score =  150 bits (380), Expect = 8e-35
 Identities = 77/92 (83%), Positives = 79/92 (85%)
 Frame = +3

Query: 3    ELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVV 182
            ELSGGQR             FKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVV
Sbjct: 1082 ELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVV 1141

Query: 183  SLKEGMFNNANVLFRTKFVDGVSTVQRSVASK 278
            SLKEGMFNNANVLFRTKFVDGVSTVQR+VA+K
Sbjct: 1142 SLKEGMFNNANVLFRTKFVDGVSTVQRTVAAK 1173


>gb|AFK40367.1| unknown [Lotus japonicus]
          Length = 191

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/92 (82%), Positives = 79/92 (85%)
 Frame = +3

Query: 3   ELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVV 182
           ELSGGQR             FKPAPLYILDEVDAALDLSHTQNIGRMIK+HFPHSQFIVV
Sbjct: 97  ELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVV 156

Query: 183 SLKEGMFNNANVLFRTKFVDGVSTVQRSVASK 278
           SLKEGMFNNANVLFRTKFVDGVSTVQR+VA+K
Sbjct: 157 SLKEGMFNNANVLFRTKFVDGVSTVQRTVATK 188


>ref|XP_003542846.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
            [Glycine max]
          Length = 1176

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/92 (82%), Positives = 79/92 (85%)
 Frame = +3

Query: 3    ELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVV 182
            ELSGGQR             FKPAPLYILDEVDAALDLSHTQNIGRMIK+HFPHSQFIVV
Sbjct: 1082 ELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVV 1141

Query: 183  SLKEGMFNNANVLFRTKFVDGVSTVQRSVASK 278
            SLKEGMFNNANVLFRTKFVDGVSTVQR+VA+K
Sbjct: 1142 SLKEGMFNNANVLFRTKFVDGVSTVQRTVAAK 1173


>ref|XP_003540523.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
            [Glycine max]
          Length = 1176

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/92 (82%), Positives = 79/92 (85%)
 Frame = +3

Query: 3    ELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVV 182
            ELSGGQR             FKPAPLYILDEVDAALDLSHTQNIGRMIK+HFPHSQFIVV
Sbjct: 1082 ELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVV 1141

Query: 183  SLKEGMFNNANVLFRTKFVDGVSTVQRSVASK 278
            SLKEGMFNNANVLFRTKFVDGVSTVQR+VA+K
Sbjct: 1142 SLKEGMFNNANVLFRTKFVDGVSTVQRTVAAK 1173


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