BLASTX nr result

ID: Coptis23_contig00006893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006893
         (2250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37733.3| unnamed protein product [Vitis vinifera]              178   e-122
ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin...   178   e-122
ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu...   177   e-121
ref|XP_002313575.1| glutamate-gated kainate-type ion channel rec...   178   e-120
ref|XP_003545055.1| PREDICTED: glutamate receptor 3.2-like [Glyc...   171   e-113

>emb|CBI37733.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  178 bits (451), Expect(3) = e-122
 Identities = 88/147 (59%), Positives = 112/147 (76%)
 Frame = +3

Query: 1782 MVFDITKHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHTPPSEKKKS 1961
            +VFD+ K+L M+++GYVWIA+TWLST+LDS +PLS     S+QGVLTLRPHTP S+KK+ 
Sbjct: 463  LVFDVAKYLGMMESGYVWIASTWLSTILDS-TPLSSKTADSIQGVLTLRPHTPDSKKKRE 521

Query: 1962 FFSRWRQLSNGTIGLNHYGLYA*DIIWIIANAVKAFFEKGGTISFSNGSNLHKAVGGALN 2141
            F SRW  LSNGTIGLN YGLYA D +W+I  A+K FF++GGTISFSN ++    V G LN
Sbjct: 522  FSSRWNHLSNGTIGLNPYGLYAYDTVWMITYALKTFFDQGGTISFSNITSGTALVAGELN 581

Query: 2142 LAAMIVFDGGK*LLDDILQNSLLGSVG 2222
            L A+ +FDGG+ LL +ILQ +  G  G
Sbjct: 582  LGALSIFDGGQQLLKNILQINRTGLTG 608



 Score =  162 bits (410), Expect(3) = e-122
 Identities = 82/118 (69%), Positives = 95/118 (80%)
 Frame = +3

Query: 1098 WLLALSILSFGEFSNGASRPAVVNIGAIFTLGTINGQVSKIAMEAAVNDVNYDPSFLGGS 1277
            WL+ L IL    ++ G   P VVNIGAIFT  TING+V+KIAM+AA  DVN DPS LGG 
Sbjct: 235  WLVLLLILCIRGYTEGVLNPEVVNIGAIFTFSTINGKVAKIAMKAAEQDVNSDPSILGGR 294

Query: 1278 KLNITVHDSNFSGFLSIIGGLQFMETDTVAIIGPQASVMAHVLSHVVNELQVLLLSFT 1451
            KL IT+HDSN+SGFLSI+G LQFME+DTVAIIGPQ++VMAHVLSH+ NEL V LLSFT
Sbjct: 295  KLAITLHDSNYSGFLSIVGALQFMESDTVAIIGPQSAVMAHVLSHLANELHVPLLSFT 352



 Score =  147 bits (371), Expect(3) = e-122
 Identities = 68/113 (60%), Positives = 90/113 (79%)
 Frame = +1

Query: 1444 LSHAATYPTLYALQYPFFLKISPSDAFQMTAIADIVTHYGWGEVIVIYTDDDHGRNGISA 1623
            LS  A  P L  LQ+P+F++ +PSD FQMTAIAD+V+++ W EVI +Y+DDD  RNGI+ 
Sbjct: 349  LSFTALDPALSPLQFPYFIQTAPSDLFQMTAIADMVSYFEWREVIAVYSDDDQSRNGITT 408

Query: 1624 LGDKLVKRRCRISYKAALPPDPGATQAEITNALVKVALMESRIIVVHTYSNSG 1782
            LGDKL +R+C+ISYKAALPPDP AT+ ++ N LVKV +MESR+IV+HT S +G
Sbjct: 409  LGDKLAERQCKISYKAALPPDPKATRDQVFNELVKVRMMESRVIVLHTLSKTG 461


>ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera]
          Length = 917

 Score =  178 bits (451), Expect(3) = e-122
 Identities = 88/147 (59%), Positives = 112/147 (76%)
 Frame = +3

Query: 1782 MVFDITKHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHTPPSEKKKS 1961
            +VFD+ K+L M+++GYVWIA+TWLST+LDS +PLS     S+QGVLTLRPHTP S+KK+ 
Sbjct: 233  LVFDVAKYLGMMESGYVWIASTWLSTILDS-TPLSSKTADSIQGVLTLRPHTPDSKKKRE 291

Query: 1962 FFSRWRQLSNGTIGLNHYGLYA*DIIWIIANAVKAFFEKGGTISFSNGSNLHKAVGGALN 2141
            F SRW  LSNGTIGLN YGLYA D +W+I  A+K FF++GGTISFSN ++    V G LN
Sbjct: 292  FSSRWNHLSNGTIGLNPYGLYAYDTVWMITYALKTFFDQGGTISFSNITSGTALVAGELN 351

Query: 2142 LAAMIVFDGGK*LLDDILQNSLLGSVG 2222
            L A+ +FDGG+ LL +ILQ +  G  G
Sbjct: 352  LGALSIFDGGQQLLKNILQINRTGLTG 378



 Score =  162 bits (410), Expect(3) = e-122
 Identities = 82/118 (69%), Positives = 95/118 (80%)
 Frame = +3

Query: 1098 WLLALSILSFGEFSNGASRPAVVNIGAIFTLGTINGQVSKIAMEAAVNDVNYDPSFLGGS 1277
            WL+ L IL    ++ G   P VVNIGAIFT  TING+V+KIAM+AA  DVN DPS LGG 
Sbjct: 5    WLVLLLILCIRGYTEGVLNPEVVNIGAIFTFSTINGKVAKIAMKAAEQDVNSDPSILGGR 64

Query: 1278 KLNITVHDSNFSGFLSIIGGLQFMETDTVAIIGPQASVMAHVLSHVVNELQVLLLSFT 1451
            KL IT+HDSN+SGFLSI+G LQFME+DTVAIIGPQ++VMAHVLSH+ NEL V LLSFT
Sbjct: 65   KLAITLHDSNYSGFLSIVGALQFMESDTVAIIGPQSAVMAHVLSHLANELHVPLLSFT 122



 Score =  147 bits (371), Expect(3) = e-122
 Identities = 68/113 (60%), Positives = 90/113 (79%)
 Frame = +1

Query: 1444 LSHAATYPTLYALQYPFFLKISPSDAFQMTAIADIVTHYGWGEVIVIYTDDDHGRNGISA 1623
            LS  A  P L  LQ+P+F++ +PSD FQMTAIAD+V+++ W EVI +Y+DDD  RNGI+ 
Sbjct: 119  LSFTALDPALSPLQFPYFIQTAPSDLFQMTAIADMVSYFEWREVIAVYSDDDQSRNGITT 178

Query: 1624 LGDKLVKRRCRISYKAALPPDPGATQAEITNALVKVALMESRIIVVHTYSNSG 1782
            LGDKL +R+C+ISYKAALPPDP AT+ ++ N LVKV +MESR+IV+HT S +G
Sbjct: 179  LGDKLAERQCKISYKAALPPDPKATRDQVFNELVKVRMMESRVIVLHTLSKTG 231


>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 924

 Score =  177 bits (448), Expect(3) = e-121
 Identities = 84/147 (57%), Positives = 108/147 (73%)
 Frame = +3

Query: 1782 MVFDITKHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHTPPSEKKKS 1961
            +VFD+ + L M++ G+VWIATTWLSTVLDS SPL      S+QGV+T RPHTP S++K+ 
Sbjct: 232  LVFDVAQSLGMMEKGFVWIATTWLSTVLDSNSPLPSKTANSIQGVITFRPHTPDSKRKRD 291

Query: 1962 FFSRWRQLSNGTIGLNHYGLYA*DIIWIIANAVKAFFEKGGTISFSNGSNLHKAVGGALN 2141
            F SRW +LSNG+IGLN Y LYA D +W+IA+A+K FF++G TISFSN S L    GG LN
Sbjct: 292  FESRWNKLSNGSIGLNPYALYAYDTVWMIAHAMKLFFDQGNTISFSNDSKLSGLGGGTLN 351

Query: 2142 LAAMIVFDGGK*LLDDILQNSLLGSVG 2222
            L A+ +FDGG  LL +IL  ++ G  G
Sbjct: 352  LGALSIFDGGSKLLKNILLTNMTGLTG 378



 Score =  155 bits (391), Expect(3) = e-121
 Identities = 79/123 (64%), Positives = 95/123 (77%)
 Frame = +3

Query: 1083 MNPFWWLLALSILSFGEFSNGASRPAVVNIGAIFTLGTINGQVSKIAMEAAVNDVNYDPS 1262
            MN  W +  L  +S    S+GA  P V+N+GAIFT  TING+V++IAM+AA +D+N DPS
Sbjct: 1    MNRVWLVSFLVCIS--SLSHGAPNPGVINVGAIFTFNTINGKVARIAMKAAEDDINSDPS 58

Query: 1263 FLGGSKLNITVHDSNFSGFLSIIGGLQFMETDTVAIIGPQASVMAHVLSHVVNELQVLLL 1442
             LGG K + T+HDSNFSGFL IIG LQFMETDTVAI+GPQ +VMAHVLSH+ NEL V LL
Sbjct: 59   ILGGWKFSTTMHDSNFSGFLGIIGALQFMETDTVAILGPQNAVMAHVLSHLANELHVPLL 118

Query: 1443 SFT 1451
            SFT
Sbjct: 119  SFT 121



 Score =  154 bits (389), Expect(3) = e-121
 Identities = 69/113 (61%), Positives = 93/113 (82%)
 Frame = +1

Query: 1444 LSHAATYPTLYALQYPFFLKISPSDAFQMTAIADIVTHYGWGEVIVIYTDDDHGRNGISA 1623
            LS  A  PTL  LQYP+F++ +P+D FQMTAIA++V++YGW EVI +Y+DDD  RNG++A
Sbjct: 118  LSFTALDPTLSPLQYPYFVQTAPNDLFQMTAIAEMVSYYGWAEVIAVYSDDDQSRNGVTA 177

Query: 1624 LGDKLVKRRCRISYKAALPPDPGATQAEITNALVKVALMESRIIVVHTYSNSG 1782
            LGDKL +RRCRISYKAALPPDP A ++++ + LVK+  MESR+IV+HT+S +G
Sbjct: 178  LGDKLAERRCRISYKAALPPDPTANRSDVQDELVKILRMESRVIVLHTFSRTG 230


>ref|XP_002313575.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222849983|gb|EEE87530.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 900

 Score =  178 bits (452), Expect(3) = e-120
 Identities = 86/147 (58%), Positives = 109/147 (74%)
 Frame = +3

Query: 1782 MVFDITKHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHTPPSEKKKS 1961
            +VFD+ K L M++ G+VWI T+WLSTV+DS SPL P    S+QGVL LRPHTP S++K  
Sbjct: 234  LVFDVAKALGMMENGFVWIVTSWLSTVIDSASPL-PTTANSIQGVLALRPHTPDSKRKGD 292

Query: 1962 FFSRWRQLSNGTIGLNHYGLYA*DIIWIIANAVKAFFEKGGTISFSNGSNLHKAVGGALN 2141
            F SRW QLSNG+IGLN YGLYA D +W++A A+K+FF++G TISF+N S L    GG LN
Sbjct: 293  FMSRWNQLSNGSIGLNPYGLYAYDTVWLLARALKSFFDQGNTISFTNDSRLGGIGGGYLN 352

Query: 2142 LAAMIVFDGGK*LLDDILQNSLLGSVG 2222
            L A+ +FDGG  LL +ILQ S+ G  G
Sbjct: 353  LGALSIFDGGSQLLKNILQTSMTGLTG 379



 Score =  159 bits (403), Expect(3) = e-120
 Identities = 81/119 (68%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
 Frame = +3

Query: 1098 WLLALSILSFGEFSNGASRPA-VVNIGAIFTLGTINGQVSKIAMEAAVNDVNYDPSFLGG 1274
            WLL+  IL    FS GA  P   VN+GAIFT  +ING+V+KIAMEAA +D+N DPS LGG
Sbjct: 5    WLLSFWILCTSSFSQGALSPGGTVNVGAIFTFSSINGRVAKIAMEAAEDDINSDPSLLGG 64

Query: 1275 SKLNITVHDSNFSGFLSIIGGLQFMETDTVAIIGPQASVMAHVLSHVVNELQVLLLSFT 1451
             KL+I +HDSNFSGFL IIG LQF+ETDTVA+IGPQ +VMAHVLSH+ NELQV  LSFT
Sbjct: 65   RKLSINMHDSNFSGFLGIIGALQFLETDTVAVIGPQTAVMAHVLSHLANELQVPFLSFT 123



 Score =  145 bits (366), Expect(3) = e-120
 Identities = 66/113 (58%), Positives = 90/113 (79%)
 Frame = +1

Query: 1444 LSHAATYPTLYALQYPFFLKISPSDAFQMTAIADIVTHYGWGEVIVIYTDDDHGRNGISA 1623
            LS  A  PTL  LQ+P+F++ +P+D FQMTAIADIV++YGW EV  ++ DDD  RNGI+ 
Sbjct: 120  LSFTALDPTLSPLQFPYFIQTAPNDLFQMTAIADIVSYYGWSEVTAVFNDDDQNRNGITV 179

Query: 1624 LGDKLVKRRCRISYKAALPPDPGATQAEITNALVKVALMESRIIVVHTYSNSG 1782
            LGDKL +RRC+ISYKAALPP+P AT+++I + L K+  MESR+IV++T+S +G
Sbjct: 180  LGDKLAERRCKISYKAALPPEPKATRSDIQDELAKILGMESRVIVLNTFSKTG 232


>ref|XP_003545055.1| PREDICTED: glutamate receptor 3.2-like [Glycine max]
          Length = 915

 Score =  171 bits (433), Expect(3) = e-113
 Identities = 82/147 (55%), Positives = 107/147 (72%)
 Frame = +3

Query: 1782 MVFDITKHLRMIDTGYVWIATTWLSTVLDSKSPLSPNVGRSLQGVLTLRPHTPPSEKKKS 1961
            +VF++ + L M+  GYVWIAT WLSTVLDS + L  N   S+QGV+T RPHTP S KK++
Sbjct: 237  LVFEVAQKLGMMSKGYVWIATAWLSTVLDSTTSLPSNTCNSIQGVITFRPHTPHSRKKQA 296

Query: 1962 FFSRWRQLSNGTIGLNHYGLYA*DIIWIIANAVKAFFEKGGTISFSNGSNLHKAVGGALN 2141
            F SRW+ +SNG+IGLN YGLYA D +W+IA A+K FF++ GTISFSN +NL       L+
Sbjct: 297  FISRWKHISNGSIGLNPYGLYAYDSVWMIAEALKLFFDRNGTISFSNNTNLSGTREETLD 356

Query: 2142 LAAMIVFDGGK*LLDDILQNSLLGSVG 2222
              A+ VFDGGK LLD+IL+ ++ G  G
Sbjct: 357  FGALSVFDGGKELLDNILRINMTGLTG 383



 Score =  145 bits (365), Expect(3) = e-113
 Identities = 64/113 (56%), Positives = 89/113 (78%)
 Frame = +1

Query: 1444 LSHAATYPTLYALQYPFFLKISPSDAFQMTAIADIVTHYGWGEVIVIYTDDDHGRNGISA 1623
            LS  A  PTL  LQYP+FL+ +PSD F M A+AD+++++GW EVI +++DDD  RNGI+ 
Sbjct: 123  LSSTALDPTLTPLQYPYFLQTAPSDHFHMNAVADLISYFGWREVIAVFSDDDQSRNGITV 182

Query: 1624 LGDKLVKRRCRISYKAALPPDPGATQAEITNALVKVALMESRIIVVHTYSNSG 1782
            LGDKL +RRC++SYKAALPPDP AT + +T  LVK+  MESR+IV++T++ +G
Sbjct: 183  LGDKLAERRCKLSYKAALPPDPTATPSHVTGQLVKIKSMESRVIVLNTFAQTG 235



 Score =  144 bits (362), Expect(3) = e-113
 Identities = 82/127 (64%), Positives = 97/127 (76%), Gaps = 4/127 (3%)
 Frame = +3

Query: 1083 MNPFWW--LLALSILSFGEFSNGASR--PAVVNIGAIFTLGTINGQVSKIAMEAAVNDVN 1250
            MN  +W  LL +++L+     +GASR    VV IGAIFTL TING+VSKIA++AA  DVN
Sbjct: 1    MNHRFWMNLLCVALLTL-ILLHGASRGHDDVVKIGAIFTLKTINGRVSKIAIQAAEKDVN 59

Query: 1251 YDPSFLGGSKLNITVHDSNFSGFLSIIGGLQFMETDTVAIIGPQASVMAHVLSHVVNELQ 1430
             DP  LGG KL+IT+HDSNFSGFL  IG L+F+ TDTVAIIGPQ+SVMAHVLSH+ NEL 
Sbjct: 60   SDPRILGGRKLSITIHDSNFSGFLGFIGALKFLVTDTVAIIGPQSSVMAHVLSHLANELH 119

Query: 1431 VLLLSFT 1451
            V LLS T
Sbjct: 120  VPLLSST 126


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