BLASTX nr result

ID: Coptis23_contig00006886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006886
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284185.1| PREDICTED: uncharacterized protein LOC100264...   159   6e-53
ref|XP_003523823.1| PREDICTED: uncharacterized protein LOC100787...   143   2e-48
ref|XP_002301044.1| predicted protein [Populus trichocarpa] gi|2...   145   7e-47
ref|XP_002307386.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-45
ref|XP_004142611.1| PREDICTED: uncharacterized protein LOC101215...   127   7e-40

>ref|XP_002284185.1| PREDICTED: uncharacterized protein LOC100264413 [Vitis vinifera]
          Length = 332

 Score =  159 bits (403), Expect(2) = 6e-53
 Identities = 75/102 (73%), Positives = 87/102 (85%)
 Frame = -2

Query: 308 LGRSSNRIGRAANSPVLWAKTKSMECDMSEPTSPKVSCSGQIKVRSKTDSCKNWQSVMEE 129
           L +SS R G  A SP+LWAKTK M  ++SEPTSPKV+C+GQIKVR KT SCKNWQSVMEE
Sbjct: 59  LKKSSTRNGGQA-SPLLWAKTKPMGTEISEPTSPKVTCAGQIKVRHKTSSCKNWQSVMEE 117

Query: 128 IERLHNNRKQKKRPTWVEALGLKKDVMQFLSCLRGLRFDLRC 3
           IER+HNN+K KKRPTWVEALG KK++MQFL+CLR +RFD RC
Sbjct: 118 IERIHNNKKHKKRPTWVEALGFKKEIMQFLTCLRSIRFDFRC 159



 Score = 73.9 bits (180), Expect(2) = 6e-53
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = -3

Query: 547 MRGREGKGGAPPTDLLVCFPSRTHLALMPKPICSPARPMDSTKRH 413
           M+GREGK  AP  DLLVCFPSR HL LMPKPICSPARP + +KRH
Sbjct: 1   MKGREGKA-APSADLLVCFPSRAHLTLMPKPICSPARPSEPSKRH 44


>ref|XP_003523823.1| PREDICTED: uncharacterized protein LOC100787579 [Glycine max]
          Length = 293

 Score =  143 bits (361), Expect(2) = 2e-48
 Identities = 64/100 (64%), Positives = 83/100 (83%)
 Frame = -2

Query: 302 RSSNRIGRAANSPVLWAKTKSMECDMSEPTSPKVSCSGQIKVRSKTDSCKNWQSVMEEIE 123
           +S +R G    SP+LWAKTKSM  +++EPTSPKV+C+GQIKVR KT SC++WQSVMEEIE
Sbjct: 50  KSFSRGGGGPASPLLWAKTKSMGSEITEPTSPKVTCAGQIKVRPKTTSCRSWQSVMEEIE 109

Query: 122 RLHNNRKQKKRPTWVEALGLKKDVMQFLSCLRGLRFDLRC 3
           ++H ++KQ+KR  W E LG KK++MQFL+CLR +RFDLRC
Sbjct: 110 KIHTDKKQRKRLGWAETLGFKKEIMQFLTCLRSIRFDLRC 149



 Score = 75.1 bits (183), Expect(2) = 2e-48
 Identities = 34/47 (72%), Positives = 37/47 (78%)
 Frame = -3

Query: 547 MRGREGKGGAPPTDLLVCFPSRTHLALMPKPICSPARPMDSTKRHNR 407
           M+ REGK  AP  DLLVCFPSR HL LMPKPICSPARP +  KRH+R
Sbjct: 2   MKLREGKALAPSADLLVCFPSRAHLTLMPKPICSPARPAEPNKRHHR 48


>ref|XP_002301044.1| predicted protein [Populus trichocarpa] gi|222842770|gb|EEE80317.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  145 bits (365), Expect(2) = 7e-47
 Identities = 64/102 (62%), Positives = 83/102 (81%)
 Frame = -2

Query: 308 LGRSSNRIGRAANSPVLWAKTKSMECDMSEPTSPKVSCSGQIKVRSKTDSCKNWQSVMEE 129
           L +SS R G +  SP+LW KT+ M+ ++SEPTSPKV+C+GQIKVR K  SCKNWQSVMEE
Sbjct: 58  LKKSSPRGGGSRASPLLWTKTRQMDSELSEPTSPKVTCAGQIKVRHKASSCKNWQSVMEE 117

Query: 128 IERLHNNRKQKKRPTWVEALGLKKDVMQFLSCLRGLRFDLRC 3
           IER+H ++K  K+ TW+++LG KKD+MQFL+CLR +RFD RC
Sbjct: 118 IERIHISKKSTKKSTWLDSLGFKKDIMQFLTCLRNIRFDFRC 159



 Score = 68.2 bits (165), Expect(2) = 7e-47
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = -3

Query: 547 MRGREGKGGAPPTDLLVCFPSRTHLALMPKPICSPARPMDSTKRH 413
           M+GRE +  AP  DLLVCFPSR HL LMPKPICSPARP++ +K H
Sbjct: 1   MKGRESRR-APSADLLVCFPSRAHLTLMPKPICSPARPLEPSKPH 44


>ref|XP_002307386.1| predicted protein [Populus trichocarpa] gi|222856835|gb|EEE94382.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  142 bits (358), Expect(2) = 3e-45
 Identities = 64/102 (62%), Positives = 80/102 (78%)
 Frame = -2

Query: 308 LGRSSNRIGRAANSPVLWAKTKSMECDMSEPTSPKVSCSGQIKVRSKTDSCKNWQSVMEE 129
           L +SS R      SP+LWAK K M  ++SEPTSPKV+C+GQIKVR K  SCKNWQSVMEE
Sbjct: 58  LKKSSTRGVGIRASPLLWAKAKQMGSEVSEPTSPKVTCAGQIKVRHKESSCKNWQSVMEE 117

Query: 128 IERLHNNRKQKKRPTWVEALGLKKDVMQFLSCLRGLRFDLRC 3
           IE++HN+RK  K+ TW+++LG KKD+M FL+CLR +RFD RC
Sbjct: 118 IEKIHNSRKHTKKSTWIDSLGFKKDIMHFLTCLRNIRFDFRC 159



 Score = 65.5 bits (158), Expect(2) = 3e-45
 Identities = 33/48 (68%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
 Frame = -3

Query: 547 MRGREGKGGAPPTDLLVCFPSRTHLALMPKPICSPARPMDSTK-RHNR 407
           M+GRE +  AP  DLLVCFPSR HL LMPKPICSPARP +++K R NR
Sbjct: 1   MKGREIRR-APSADLLVCFPSRAHLTLMPKPICSPARPSETSKPRQNR 47


>ref|XP_004142611.1| PREDICTED: uncharacterized protein LOC101215043 [Cucumis sativus]
          Length = 182

 Score =  127 bits (318), Expect(2) = 7e-40
 Identities = 59/101 (58%), Positives = 81/101 (80%), Gaps = 1/101 (0%)
 Frame = -2

Query: 302 RSSNRIGRAANSPVLWAKTKSMECDMSEPTSPKVSCSGQIKVRSKTDSCKNWQSVMEEIE 123
           R  +R  ++A SPV+WAK K+M  ++SEP+SPKV+C+GQIK+R K  + K+WQSVMEEIE
Sbjct: 60  RRYHRRRKSAESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIE 117

Query: 122 RLHNNRK-QKKRPTWVEALGLKKDVMQFLSCLRGLRFDLRC 3
           R+HN RK +++R  W+E+ G KKD+MQFL+CLR +RFD RC
Sbjct: 118 RIHNRRKLRRRRFNWIESFGFKKDIMQFLTCLRTMRFDFRC 158



 Score = 62.8 bits (151), Expect(2) = 7e-40
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -3

Query: 538 REGKGGAPPTDLLVCFPSRTHLALMPKPICSPARPMDSTK 419
           RE   G P +DLLVCFPSR+HLALMP P+CSPAR  DS+K
Sbjct: 15  REKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSK 54


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