BLASTX nr result

ID: Coptis23_contig00006881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006881
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533789.1| short chain alcohol dehydrogenase, putative ...   415   e-114
ref|XP_002265892.1| PREDICTED: sex determination protein tassels...   411   e-112
ref|XP_002308240.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110
ref|XP_002323034.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
ref|XP_003522142.1| PREDICTED: sex determination protein tassels...   395   e-107

>ref|XP_002533789.1| short chain alcohol dehydrogenase, putative [Ricinus communis]
           gi|223526278|gb|EEF28591.1| short chain alcohol
           dehydrogenase, putative [Ricinus communis]
          Length = 303

 Score =  415 bits (1067), Expect = e-114
 Identities = 214/307 (69%), Positives = 243/307 (79%)
 Frame = +2

Query: 47  MPAQVMVEKPLQGIHGLSRENNSPHYRRLEXXXXXXXXXXXXXXXXXXRLFIRHGAKVVI 226
           MPAQVM E+ L GIH L+RENN P  RRLE                  RLF +HGAKVVI
Sbjct: 1   MPAQVMPEQTLHGIHVLARENNPPSPRRLEGKVAIVTGGARGIGEATVRLFAKHGAKVVI 60

Query: 227 ADVNDSIGIALANALQPWAMFVHCDVSIEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQS 406
           ADV D+ G  LAN+L P+  FVHCDVS E+D+ NLI++T+S YG+LDI +NNAG+LGNQ 
Sbjct: 61  ADVEDTPGTILANSLSPFVTFVHCDVSQEEDIENLINSTVSHYGRLDILFNNAGLLGNQP 120

Query: 407 KHKSIIDFDVEEFDRVMNVNVKGVALGMKHAARVMMAKRTGCIISTASVAGVMGGLGPHA 586
           K+KSI++FDV+EFDRVM VNVKGVALG+KHAARVM+ +  GCIISTASVAGVMGGLGPHA
Sbjct: 121 KNKSILEFDVDEFDRVMRVNVKGVALGIKHAARVMIPRGVGCIISTASVAGVMGGLGPHA 180

Query: 587 YTASKNAIVGLTKNAACELGRYGIRVNCISPFGVATPMLINAWKKPXXXXXXXXXCMQVG 766
           YTASK+AIVGLTKN ACELGRYGIRVNCISPFGVAT ML+NAW+           CM   
Sbjct: 181 YTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWRS--SDDQEDDECMNF- 237

Query: 767 RGSPYQEEVEKMEEFVRSLANLKGPTLRPKDIAEAALYLASDESRYVSGHNLVVDGGVTT 946
            G P ++EVEKMEEFVR LANLKG TLR KDIAEAALYLASDES+YVSGHNLVVDGG+TT
Sbjct: 238 -GLPCEQEVEKMEEFVRGLANLKGTTLRGKDIAEAALYLASDESKYVSGHNLVVDGGITT 296

Query: 947 SRNCVGL 967
           SRNC+GL
Sbjct: 297 SRNCIGL 303


>ref|XP_002265892.1| PREDICTED: sex determination protein tasselseed-2-like [Vitis
           vinifera]
          Length = 303

 Score =  411 bits (1057), Expect = e-112
 Identities = 212/308 (68%), Positives = 242/308 (78%), Gaps = 1/308 (0%)
 Frame = +2

Query: 47  MPAQVMVEKPLQGIHGLSRENNS-PHYRRLEXXXXXXXXXXXXXXXXXXRLFIRHGAKVV 223
           MP  +M EK  QG+H L REN+S P Y RLE                  RLF RHGAKVV
Sbjct: 1   MPVPIMPEKSFQGLHVLGRENSSYPFYNRLEGKIAVVTGGARGIGEATVRLFARHGAKVV 60

Query: 224 IADVNDSIGIALANALQPWAMFVHCDVSIEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQ 403
           IADV D++G ALA++L P   FVHCDVS+E+D+ N+I++T+SRYG+LDI +NNAGVLGNQ
Sbjct: 61  IADVEDTLGAALASSLAPSVTFVHCDVSLEEDIENVINSTVSRYGRLDILFNNAGVLGNQ 120

Query: 404 SKHKSIIDFDVEEFDRVMNVNVKGVALGMKHAARVMMAKRTGCIISTASVAGVMGGLGPH 583
           SKHKSIIDFD++EFD+VM VNV+G+ALG+KHAARVM+ +  GCIISTASVAGVMGGLGPH
Sbjct: 121 SKHKSIIDFDIDEFDQVMRVNVRGMALGIKHAARVMVPRGMGCIISTASVAGVMGGLGPH 180

Query: 584 AYTASKNAIVGLTKNAACELGRYGIRVNCISPFGVATPMLINAWKKPXXXXXXXXXCMQV 763
           AYTASK+AIVGLTKN ACELGRYGIRVNCISPFGVAT ML+NAW+           CM  
Sbjct: 181 AYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWRS---SDEEEEDCMNF 237

Query: 764 GRGSPYQEEVEKMEEFVRSLANLKGPTLRPKDIAEAALYLASDESRYVSGHNLVVDGGVT 943
             G P + EVEKMEEFV  LANLKG  LR KDIAEAALYLASDES+YVSGHNLVVDGG+T
Sbjct: 238 --GIPCEREVEKMEEFVSGLANLKGHILRAKDIAEAALYLASDESKYVSGHNLVVDGGIT 295

Query: 944 TSRNCVGL 967
           TSRNCVGL
Sbjct: 296 TSRNCVGL 303


>ref|XP_002308240.1| predicted protein [Populus trichocarpa] gi|222854216|gb|EEE91763.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  402 bits (1032), Expect = e-110
 Identities = 209/311 (67%), Positives = 242/311 (77%), Gaps = 4/311 (1%)
 Frame = +2

Query: 47  MPAQVMVEKPLQGIHGLSRE----NNSPHYRRLEXXXXXXXXXXXXXXXXXXRLFIRHGA 214
           MP QVM EK LQ IH + RE    N++    RLE                  RLF R GA
Sbjct: 1   MPGQVMQEKTLQSIHVMGREKSTENSTRSPGRLEGRVAIVTGGARGIGEATVRLFARQGA 60

Query: 215 KVVIADVNDSIGIALANALQPWAMFVHCDVSIEKDMVNLIHTTISRYGQLDIFYNNAGVL 394
           KVVIADV D++G +L N+L P   FVHCDVS+EKD+ NLI++TIS+YG+LDI +NNAGVL
Sbjct: 61  KVVIADVEDALGTSLVNSLAPSVSFVHCDVSLEKDIENLINSTISQYGKLDILFNNAGVL 120

Query: 395 GNQSKHKSIIDFDVEEFDRVMNVNVKGVALGMKHAARVMMAKRTGCIISTASVAGVMGGL 574
           GNQSK+KSI+DFDV+EFDRVM+VNV+G+ALG+KHAARVM+ +  GCIISTASVAGVMGGL
Sbjct: 121 GNQSKNKSIVDFDVDEFDRVMHVNVRGMALGIKHAARVMIPRGGGCIISTASVAGVMGGL 180

Query: 575 GPHAYTASKNAIVGLTKNAACELGRYGIRVNCISPFGVATPMLINAWKKPXXXXXXXXXC 754
           GPHAYTASK+AIVGLTKN ACELGRYGIRVNCISPFGVAT ML+NAW+            
Sbjct: 181 GPHAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWRSSGEEED----- 235

Query: 755 MQVGRGSPYQEEVEKMEEFVRSLANLKGPTLRPKDIAEAALYLASDESRYVSGHNLVVDG 934
             +  G P ++EVEKME+FVR LANLKGPTLR +DIAEAALYLASDES+YVSGHNLVVDG
Sbjct: 236 -SLNFGLPSEKEVEKMEDFVRGLANLKGPTLRARDIAEAALYLASDESKYVSGHNLVVDG 294

Query: 935 GVTTSRNCVGL 967
           G+TTS NCVGL
Sbjct: 295 GITTSTNCVGL 305


>ref|XP_002323034.1| predicted protein [Populus trichocarpa] gi|222867664|gb|EEF04795.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  401 bits (1030), Expect = e-109
 Identities = 210/311 (67%), Positives = 240/311 (77%), Gaps = 4/311 (1%)
 Frame = +2

Query: 47  MPAQVMVEKPLQGIHGLSREN---NSP-HYRRLEXXXXXXXXXXXXXXXXXXRLFIRHGA 214
           MP QVM EK LQ  +   RE    NSP    RLE                  RLF RHGA
Sbjct: 1   MPCQVMQEKTLQSFYAAGREKSTENSPCSPGRLEGRVAVVTGGARGIGEATVRLFARHGA 60

Query: 215 KVVIADVNDSIGIALANALQPWAMFVHCDVSIEKDMVNLIHTTISRYGQLDIFYNNAGVL 394
           KVVIADV D++G  LAN+L P   FVHCDVS+E+D+ NLI++T+S YG+LD+ +NNAGVL
Sbjct: 61  KVVIADVEDTLGTLLANSLAPSVSFVHCDVSLEEDIENLINSTVSHYGKLDVLFNNAGVL 120

Query: 395 GNQSKHKSIIDFDVEEFDRVMNVNVKGVALGMKHAARVMMAKRTGCIISTASVAGVMGGL 574
           GNQSK+KSI++FD EEFDRVM VNV+GVALG+KHAARVM+ +  GCIISTASVAGVMGGL
Sbjct: 121 GNQSKNKSIVNFDAEEFDRVMQVNVRGVALGIKHAARVMIPRGVGCIISTASVAGVMGGL 180

Query: 575 GPHAYTASKNAIVGLTKNAACELGRYGIRVNCISPFGVATPMLINAWKKPXXXXXXXXXC 754
           GPHAYTASK+AIVGLTKN ACELGRYGIRVNCISPFGVAT ML+NAW+           C
Sbjct: 181 GPHAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWRS----GDEEEDC 236

Query: 755 MQVGRGSPYQEEVEKMEEFVRSLANLKGPTLRPKDIAEAALYLASDESRYVSGHNLVVDG 934
           +    G P ++EVEKME+FVR LANLKGPTLR +DIAEAALYLASDES+YVSGHNLVVDG
Sbjct: 237 LNF--GLPCEKEVEKMEDFVRGLANLKGPTLRARDIAEAALYLASDESKYVSGHNLVVDG 294

Query: 935 GVTTSRNCVGL 967
           G+TTSRNCVGL
Sbjct: 295 GITTSRNCVGL 305


>ref|XP_003522142.1| PREDICTED: sex determination protein tasselseed-2-like isoform 1
           [Glycine max]
          Length = 311

 Score =  395 bits (1014), Expect = e-107
 Identities = 208/308 (67%), Positives = 241/308 (78%), Gaps = 3/308 (0%)
 Frame = +2

Query: 53  AQVMVEKPLQGIHGLSRENN-SPHYRRLEXXXXXXXXXXXXXXXXXXRLFIRHGAKVVIA 229
           A+VM EKPL G+  LSRE++ S   RRLE                  R+F ++GA+VVIA
Sbjct: 4   AEVMPEKPLHGVPILSRESSFSSSPRRLEGKVAIVTGGARGIGEATVRVFAKNGARVVIA 63

Query: 230 DVNDSIGIALANALQPWAMFVHCDVSIEKDMVNLIHTTISRYGQLDIFYNNAGVLGNQSK 409
           DV D++G  LA  L P A +VHCDVS E+++ NL+ +T+SRYGQLDI +NNAGVLGNQSK
Sbjct: 64  DVEDALGTMLAETLAPSATYVHCDVSKEEEVENLVRSTVSRYGQLDIMFNNAGVLGNQSK 123

Query: 410 HKSIIDFDVEEFDRVMNVNVKGVALGMKHAARVMMAKRTGCIISTASVAGVMGGLGPHAY 589
           +KSII+FD EEFD+VM+VNVKG+ALG+KHAARVM+ K  GCIISTASVAGVMGGLGPHAY
Sbjct: 124 NKSIINFDPEEFDKVMSVNVKGMALGIKHAARVMIPKGIGCIISTASVAGVMGGLGPHAY 183

Query: 590 TASKNAIVGLTKNAACELGRYGIRVNCISPFGVATPMLINAWKKPXXXXXXXXXCMQ--V 763
           TASK+AIVGLTKN ACELGRYGIRVNCISPFGVAT ML+NAWK             +  +
Sbjct: 184 TASKHAIVGLTKNTACELGRYGIRVNCISPFGVATNMLVNAWKSGGGDDDDDDQGDEGII 243

Query: 764 GRGSPYQEEVEKMEEFVRSLANLKGPTLRPKDIAEAALYLASDESRYVSGHNLVVDGGVT 943
             G PYQEEVEKME FVR LANL+G TLR KDIAEAALYLASDES+YVSGHNLVVDGGVT
Sbjct: 244 NFGLPYQEEVEKMEGFVRGLANLQGATLRAKDIAEAALYLASDESKYVSGHNLVVDGGVT 303

Query: 944 TSRNCVGL 967
           +SRNC+GL
Sbjct: 304 SSRNCIGL 311


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