BLASTX nr result

ID: Coptis23_contig00006877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006877
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305966.1| predicted protein [Populus trichocarpa] gi|2...   227   9e-58
ref|XP_002537268.1| endo-1,3(4)-beta-glucanase, putative [Ricinu...   225   3e-57
dbj|BAJ95724.1| predicted protein [Hordeum vulgare subsp. vulgare]    223   2e-56
dbj|BAJ90217.1| predicted protein [Hordeum vulgare subsp. vulgare]    223   2e-56
ref|XP_003578062.1| PREDICTED: putative endo-1,3(4)-beta-glucana...   221   4e-56

>ref|XP_002305966.1| predicted protein [Populus trichocarpa] gi|222848930|gb|EEE86477.1|
           predicted protein [Populus trichocarpa]
          Length = 690

 Score =  227 bits (578), Expect = 9e-58
 Identities = 102/125 (81%), Positives = 116/125 (92%)
 Frame = -3

Query: 377 MGLSYGDTHLVAIGSTLAALEIQAAQTWWHVREGEGIYEDEFSKENRVVGVLWSTKRDSG 198
           MGL+YGDTHLVA GS LAALEI AAQTWWHV+EG+ +Y ++F+ ENR+VGVLW++KRDSG
Sbjct: 513 MGLAYGDTHLVATGSMLAALEIHAAQTWWHVKEGDKLYTEDFTGENRLVGVLWASKRDSG 572

Query: 197 LWFAPPAWKECRLGIQLLPLLPITENLFSDTGFARELVNWTLPALGREGVGEGWKGFVYA 18
           LWFAPPAWKECRLGIQLLPLLPI+E LFSD GF R+LVNWTLPALGREGVGEGWKGFVYA
Sbjct: 573 LWFAPPAWKECRLGIQLLPLLPISEVLFSDVGFVRKLVNWTLPALGREGVGEGWKGFVYA 632

Query: 17  LQGVY 3
           L+G+Y
Sbjct: 633 LEGIY 637


>ref|XP_002537268.1| endo-1,3(4)-beta-glucanase, putative [Ricinus communis]
           gi|223516901|gb|EEF25115.1| endo-1,3(4)-beta-glucanase,
           putative [Ricinus communis]
          Length = 235

 Score =  225 bits (574), Expect = 3e-57
 Identities = 101/125 (80%), Positives = 113/125 (90%)
 Frame = -3

Query: 377 MGLSYGDTHLVAIGSTLAALEIQAAQTWWHVREGEGIYEDEFSKENRVVGVLWSTKRDSG 198
           MGL+YGDTHLVA GS L A+EI AAQTWWHVREG+ +YE++F++ENRVVGVLW+ KRDSG
Sbjct: 58  MGLAYGDTHLVATGSMLTAMEIHAAQTWWHVREGDNLYEEDFTRENRVVGVLWNNKRDSG 117

Query: 197 LWFAPPAWKECRLGIQLLPLLPITENLFSDTGFARELVNWTLPALGREGVGEGWKGFVYA 18
           LWFAPP WKECRLGIQLLPLLPI+E LFSD GF RELVNWTLPAL R GVGEGWKGFVYA
Sbjct: 118 LWFAPPDWKECRLGIQLLPLLPISEILFSDVGFVRELVNWTLPALARGGVGEGWKGFVYA 177

Query: 17  LQGVY 3
           L+G+Y
Sbjct: 178 LEGIY 182


>dbj|BAJ95724.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 313

 Score =  223 bits (567), Expect = 2e-56
 Identities = 99/125 (79%), Positives = 112/125 (89%)
 Frame = -3

Query: 377 MGLSYGDTHLVAIGSTLAALEIQAAQTWWHVREGEGIYEDEFSKENRVVGVLWSTKRDSG 198
           +GLSYGDTHLV++G+TL A E+ AAQTWWHVREGEGIYED+FS  NRVVGVLW+ KRDSG
Sbjct: 137 LGLSYGDTHLVSVGATLTAFEMLAAQTWWHVREGEGIYEDDFSSNNRVVGVLWANKRDSG 196

Query: 197 LWFAPPAWKECRLGIQLLPLLPITENLFSDTGFARELVNWTLPALGREGVGEGWKGFVYA 18
           LWFAPP WKECRLGIQLLPLLPI+E LF D GF ++LV+WT PAL R+GVGEGWKGFVYA
Sbjct: 197 LWFAPPEWKECRLGIQLLPLLPISEALFPDIGFVKDLVSWTTPALARDGVGEGWKGFVYA 256

Query: 17  LQGVY 3
           L+GVY
Sbjct: 257 LEGVY 261


>dbj|BAJ90217.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  223 bits (567), Expect = 2e-56
 Identities = 99/125 (79%), Positives = 112/125 (89%)
 Frame = -3

Query: 377 MGLSYGDTHLVAIGSTLAALEIQAAQTWWHVREGEGIYEDEFSKENRVVGVLWSTKRDSG 198
           +GLSYGDTHLV++G+TL A E+ AAQTWWHVREGEGIYED+FS  NRVVGVLW+ KRDSG
Sbjct: 515 LGLSYGDTHLVSVGATLTAFEMLAAQTWWHVREGEGIYEDDFSSNNRVVGVLWANKRDSG 574

Query: 197 LWFAPPAWKECRLGIQLLPLLPITENLFSDTGFARELVNWTLPALGREGVGEGWKGFVYA 18
           LWFAPP WKECRLGIQLLPLLPI+E LF D GF ++LV+WT PAL R+GVGEGWKGFVYA
Sbjct: 575 LWFAPPEWKECRLGIQLLPLLPISEALFPDIGFVKDLVSWTTPALARDGVGEGWKGFVYA 634

Query: 17  LQGVY 3
           L+GVY
Sbjct: 635 LEGVY 639


>ref|XP_003578062.1| PREDICTED: putative endo-1,3(4)-beta-glucanase 2-like [Brachypodium
           distachyon]
          Length = 685

 Score =  221 bits (564), Expect = 4e-56
 Identities = 99/125 (79%), Positives = 112/125 (89%)
 Frame = -3

Query: 377 MGLSYGDTHLVAIGSTLAALEIQAAQTWWHVREGEGIYEDEFSKENRVVGVLWSTKRDSG 198
           +GLSYGDTHLV+ G+TL ALE+ AAQTWWHVREGEGIYED+FS  NRVVGVLW+ KRDSG
Sbjct: 512 LGLSYGDTHLVSAGATLTALEMLAAQTWWHVREGEGIYEDDFSGNNRVVGVLWANKRDSG 571

Query: 197 LWFAPPAWKECRLGIQLLPLLPITENLFSDTGFARELVNWTLPALGREGVGEGWKGFVYA 18
           LWFAPP WKECRLGIQLLPLLPI+E LF D GF ++LV+WT PAL R+GVGEGWKGFVYA
Sbjct: 572 LWFAPPEWKECRLGIQLLPLLPISEALFPDIGFVKDLVSWTAPALARDGVGEGWKGFVYA 631

Query: 17  LQGVY 3
           L+G+Y
Sbjct: 632 LEGIY 636


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