BLASTX nr result

ID: Coptis23_contig00006869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006869
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158496.1| PREDICTED: actin-related protein 2-like [Cuc...   439   e-121
ref|XP_004138627.1| PREDICTED: actin-related protein 2-like [Cuc...   439   e-121
ref|XP_002298643.1| predicted protein [Populus trichocarpa] gi|2...   438   e-121
ref|XP_002272485.1| PREDICTED: actin-related protein 2 [Vitis vi...   437   e-120
ref|XP_003553955.1| PREDICTED: actin-related protein 2-like [Gly...   434   e-119

>ref|XP_004158496.1| PREDICTED: actin-related protein 2-like [Cucumis sativus]
          Length = 390

 Score =  439 bits (1128), Expect = e-121
 Identities = 214/220 (97%), Positives = 218/220 (99%)
 Frame = -1

Query: 794 YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYISYDYKREYQ 615
           YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNR+ADFETVREIKEKLCYISYDYKREYQ
Sbjct: 171 YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRSADFETVREIKEKLCYISYDYKREYQ 230

Query: 614 LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFHCIQEMDID 435
           LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVF CIQEMDID
Sbjct: 231 LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDID 290

Query: 434 NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEAVLKGNKDGLKKLRLRIEDPPRRKH 255
           NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLE VLKGN+DGLKKLRLRIEDPPRRKH
Sbjct: 291 NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNRDGLKKLRLRIEDPPRRKH 350

Query: 254 MVYLGGAVLAGIMKDAPEFWISRQDYLEEGVGCLSKCGQA 135
           MVYLGGAVLAGIMKDAPEFWISR+DYLEEG+GCLSKCGQA
Sbjct: 351 MVYLGGAVLAGIMKDAPEFWISREDYLEEGLGCLSKCGQA 390


>ref|XP_004138627.1| PREDICTED: actin-related protein 2-like [Cucumis sativus]
          Length = 389

 Score =  439 bits (1128), Expect = e-121
 Identities = 214/220 (97%), Positives = 218/220 (99%)
 Frame = -1

Query: 794 YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYISYDYKREYQ 615
           YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNR+ADFETVREIKEKLCYISYDYKREYQ
Sbjct: 170 YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRSADFETVREIKEKLCYISYDYKREYQ 229

Query: 614 LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFHCIQEMDID 435
           LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVF CIQEMDID
Sbjct: 230 LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDID 289

Query: 434 NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEAVLKGNKDGLKKLRLRIEDPPRRKH 255
           NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLE VLKGN+DGLKKLRLRIEDPPRRKH
Sbjct: 290 NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNRDGLKKLRLRIEDPPRRKH 349

Query: 254 MVYLGGAVLAGIMKDAPEFWISRQDYLEEGVGCLSKCGQA 135
           MVYLGGAVLAGIMKDAPEFWISR+DYLEEG+GCLSKCGQA
Sbjct: 350 MVYLGGAVLAGIMKDAPEFWISREDYLEEGLGCLSKCGQA 389


>ref|XP_002298643.1| predicted protein [Populus trichocarpa] gi|222845901|gb|EEE83448.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  438 bits (1127), Expect = e-121
 Identities = 214/220 (97%), Positives = 217/220 (98%)
 Frame = -1

Query: 794 YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYISYDYKREYQ 615
           YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYISYDYKREYQ
Sbjct: 170 YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYISYDYKREYQ 229

Query: 614 LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFHCIQEMDID 435
           LGLETTILVKNYTLPDGR+IKVGTERFQAPEALFTPELIDVEGDGMADMVF CIQEMDID
Sbjct: 230 LGLETTILVKNYTLPDGRIIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDID 289

Query: 434 NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEAVLKGNKDGLKKLRLRIEDPPRRKH 255
           NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYL+AVLKGNKDGLKKLRLRIEDPPRRKH
Sbjct: 290 NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLDAVLKGNKDGLKKLRLRIEDPPRRKH 349

Query: 254 MVYLGGAVLAGIMKDAPEFWISRQDYLEEGVGCLSKCGQA 135
           MVYLGGAVLAGIMKDAPEFWISR DYLEEG+ CLSKCGQA
Sbjct: 350 MVYLGGAVLAGIMKDAPEFWISRDDYLEEGMACLSKCGQA 389


>ref|XP_002272485.1| PREDICTED: actin-related protein 2 [Vitis vinifera]
           gi|296082315|emb|CBI21320.3| unnamed protein product
           [Vitis vinifera]
          Length = 389

 Score =  437 bits (1125), Expect = e-120
 Identities = 215/220 (97%), Positives = 215/220 (97%)
 Frame = -1

Query: 794 YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYISYDYKREYQ 615
           YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYISYDYKREYQ
Sbjct: 170 YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYISYDYKREYQ 229

Query: 614 LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFHCIQEMDID 435
           LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVF CIQEMDID
Sbjct: 230 LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDID 289

Query: 434 NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEAVLKGNKDGLKKLRLRIEDPPRRKH 255
           NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLE VLKGNKDGLKKLRLRIEDPPRRKH
Sbjct: 290 NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKH 349

Query: 254 MVYLGGAVLAGIMKDAPEFWISRQDYLEEGVGCLSKCGQA 135
           MVYLGGAVLAGIMKDAPEFWISRQDYLEEG  CLSKCG A
Sbjct: 350 MVYLGGAVLAGIMKDAPEFWISRQDYLEEGTACLSKCGAA 389


>ref|XP_003553955.1| PREDICTED: actin-related protein 2-like [Glycine max]
          Length = 389

 Score =  434 bits (1116), Expect = e-119
 Identities = 210/220 (95%), Positives = 217/220 (98%)
 Frame = -1

Query: 794 YSFPHLTKRMNVAGRHITSYLVDLLSRRGYAMNRTADFETVREIKEKLCYISYDYKREYQ 615
           YSFPHLTKRMNVAGRHITSYLVDLLSRRGYA+NRTADFETVREIKEKLCYISYDYKREYQ
Sbjct: 170 YSFPHLTKRMNVAGRHITSYLVDLLSRRGYALNRTADFETVREIKEKLCYISYDYKREYQ 229

Query: 614 LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFHCIQEMDID 435
           LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVF CIQEMDID
Sbjct: 230 LGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDID 289

Query: 434 NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEAVLKGNKDGLKKLRLRIEDPPRRKH 255
           NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYL+ VLKGN+DGLKKLRLRIEDPPRRKH
Sbjct: 290 NRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLDVVLKGNRDGLKKLRLRIEDPPRRKH 349

Query: 254 MVYLGGAVLAGIMKDAPEFWISRQDYLEEGVGCLSKCGQA 135
           MVYLGGAVLAGIMKDAPEFWI+R+DYLEEG+ CLS+CGQA
Sbjct: 350 MVYLGGAVLAGIMKDAPEFWINREDYLEEGIACLSRCGQA 389


Top