BLASTX nr result

ID: Coptis23_contig00006866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006866
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160609.1| PREDICTED: 26S proteasome non-ATPase regulat...   150   1e-34
ref|XP_004141249.1| PREDICTED: 26S proteasome non-ATPase regulat...   150   1e-34
gb|AFK36477.1| unknown [Medicago truncatula]                          150   1e-34
ref|XP_003544454.1| PREDICTED: 26S proteasome non-ATPase regulat...   150   1e-34
ref|XP_003542979.1| PREDICTED: 26S proteasome non-ATPase regulat...   150   1e-34

>ref|XP_004160609.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like
           [Cucumis sativus]
          Length = 309

 Score =  150 bits (378), Expect = 1e-34
 Identities = 84/118 (71%), Positives = 84/118 (71%)
 Frame = +2

Query: 2   QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQXXXXXXXXXXXXXXXXX 181
           QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQ                 
Sbjct: 130 QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPR-------------- 175

Query: 182 XXXXXXXXXXXXXXXXXQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM 355
                            QTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM
Sbjct: 176 -----------------QTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM 216


>ref|XP_004141249.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like
           [Cucumis sativus] gi|449498695|ref|XP_004160608.1|
           PREDICTED: 26S proteasome non-ATPase regulatory subunit
           14-like [Cucumis sativus]
          Length = 309

 Score =  150 bits (378), Expect = 1e-34
 Identities = 84/118 (71%), Positives = 84/118 (71%)
 Frame = +2

Query: 2   QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQXXXXXXXXXXXXXXXXX 181
           QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQ                 
Sbjct: 130 QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPR-------------- 175

Query: 182 XXXXXXXXXXXXXXXXXQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM 355
                            QTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM
Sbjct: 176 -----------------QTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM 216


>gb|AFK36477.1| unknown [Medicago truncatula]
          Length = 313

 Score =  150 bits (378), Expect = 1e-34
 Identities = 84/118 (71%), Positives = 84/118 (71%)
 Frame = +2

Query: 2   QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQXXXXXXXXXXXXXXXXX 181
           QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQ                 
Sbjct: 134 QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPR-------------- 179

Query: 182 XXXXXXXXXXXXXXXXXQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM 355
                            QTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM
Sbjct: 180 -----------------QTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM 220


>ref|XP_003544454.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like
           [Glycine max] gi|356564198|ref|XP_003550343.1|
           PREDICTED: 26S proteasome non-ATPase regulatory subunit
           14-like [Glycine max]
          Length = 312

 Score =  150 bits (378), Expect = 1e-34
 Identities = 84/118 (71%), Positives = 84/118 (71%)
 Frame = +2

Query: 2   QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQXXXXXXXXXXXXXXXXX 181
           QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQ                 
Sbjct: 133 QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPR-------------- 178

Query: 182 XXXXXXXXXXXXXXXXXQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM 355
                            QTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM
Sbjct: 179 -----------------QTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM 219


>ref|XP_003542979.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like
           [Glycine max]
          Length = 309

 Score =  150 bits (378), Expect = 1e-34
 Identities = 84/118 (71%), Positives = 84/118 (71%)
 Frame = +2

Query: 2   QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQXXXXXXXXXXXXXXXXX 181
           QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQ                 
Sbjct: 130 QQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPR-------------- 175

Query: 182 XXXXXXXXXXXXXXXXXQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM 355
                            QTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM
Sbjct: 176 -----------------QTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKM 216


Top