BLASTX nr result

ID: Coptis23_contig00006863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006863
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283434.1| PREDICTED: oxysterol-binding protein-related...    92   2e-40
ref|NP_001140508.1| uncharacterized protein LOC100272570 [Zea ma...    89   2e-39
ref|XP_002468105.1| hypothetical protein SORBIDRAFT_01g039660 [S...    89   2e-39
gb|AFW88832.1| putative oxysterol binding domain family protein ...    89   2e-39
ref|XP_002882612.1| oxysterol-binding family protein [Arabidopsi...    91   3e-39

>ref|XP_002283434.1| PREDICTED: oxysterol-binding protein-related protein 3C [Vitis
           vinifera] gi|297746058|emb|CBI16114.3| unnamed protein
           product [Vitis vinifera]
          Length = 456

 Score = 92.4 bits (228), Expect(3) = 2e-40
 Identities = 42/51 (82%), Positives = 49/51 (96%)
 Frame = +1

Query: 385 QGRWKEEDRNSYWKIMQKYIGSDVTSLVSLPVLICEPMTNLQKMAEIMEYS 537
           +GRWKEE+R+SYWK+MQKYIGSDVTS+V+LPVLI EPMT LQKMAE+MEYS
Sbjct: 58  RGRWKEEERDSYWKMMQKYIGSDVTSMVTLPVLIFEPMTMLQKMAELMEYS 108



 Score = 88.6 bits (218), Expect(3) = 2e-40
 Identities = 36/44 (81%), Positives = 43/44 (97%)
 Frame = +2

Query: 611 LLDRADECEDPYMQMVYASSWAVSVFYAFRRAWKPFNPILGETY 742
           LLD+ADECEDPYM++VYASSWA+SV+YA++R WKPFNPILGETY
Sbjct: 110 LLDKADECEDPYMRLVYASSWAISVYYAYQRTWKPFNPILGETY 153



 Score = 32.3 bits (72), Expect(3) = 2e-40
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +3

Query: 210 MQKSVTGMLSYEGLEVINP 266
           M +SV G+L YEG+EVINP
Sbjct: 27  MHRSVNGLLGYEGVEVINP 45


>ref|NP_001140508.1| uncharacterized protein LOC100272570 [Zea mays]
           gi|194699766|gb|ACF83967.1| unknown [Zea mays]
           gi|413956184|gb|AFW88833.1| putative oxysterol binding
           domain family protein [Zea mays]
          Length = 466

 Score = 89.4 bits (220), Expect(3) = 2e-39
 Identities = 40/50 (80%), Positives = 47/50 (94%)
 Frame = +1

Query: 385 QGRWKEEDRNSYWKIMQKYIGSDVTSLVSLPVLICEPMTNLQKMAEIMEY 534
           +GRWK+EDR+SYWK+M KYIGSDVTSLV+LPV+I EPMT LQKMAE+MEY
Sbjct: 63  RGRWKQEDRDSYWKMMHKYIGSDVTSLVTLPVIIFEPMTMLQKMAELMEY 112



 Score = 87.4 bits (215), Expect(3) = 2e-39
 Identities = 36/44 (81%), Positives = 43/44 (97%)
 Frame = +2

Query: 611 LLDRADECEDPYMQMVYASSWAVSVFYAFRRAWKPFNPILGETY 742
           LLD+ADECEDPYM+MVYAS+WAVSV++A++R WKPFNPILGETY
Sbjct: 115 LLDKADECEDPYMRMVYASTWAVSVYFAYQRTWKPFNPILGETY 158



 Score = 33.1 bits (74), Expect(3) = 2e-39
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 210 MQKSVTGMLSYEGLEVINP 266
           + KSV G+L YEGLEVINP
Sbjct: 32  VHKSVNGLLGYEGLEVINP 50


>ref|XP_002468105.1| hypothetical protein SORBIDRAFT_01g039660 [Sorghum bicolor]
           gi|241921959|gb|EER95103.1| hypothetical protein
           SORBIDRAFT_01g039660 [Sorghum bicolor]
          Length = 461

 Score = 89.4 bits (220), Expect(3) = 2e-39
 Identities = 40/50 (80%), Positives = 47/50 (94%)
 Frame = +1

Query: 385 QGRWKEEDRNSYWKIMQKYIGSDVTSLVSLPVLICEPMTNLQKMAEIMEY 534
           +GRWK+EDR+SYWK+M KYIGSDVTSLV+LPV+I EPMT LQKMAE+MEY
Sbjct: 63  RGRWKQEDRDSYWKMMHKYIGSDVTSLVTLPVIIFEPMTMLQKMAELMEY 112



 Score = 87.4 bits (215), Expect(3) = 2e-39
 Identities = 36/44 (81%), Positives = 43/44 (97%)
 Frame = +2

Query: 611 LLDRADECEDPYMQMVYASSWAVSVFYAFRRAWKPFNPILGETY 742
           LLD+ADECEDPYM+MVYAS+WAVSV++A++R WKPFNPILGETY
Sbjct: 115 LLDKADECEDPYMRMVYASTWAVSVYFAYQRTWKPFNPILGETY 158



 Score = 33.1 bits (74), Expect(3) = 2e-39
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 210 MQKSVTGMLSYEGLEVINP 266
           + KSV G+L YEGLEVINP
Sbjct: 32  VHKSVNGLLGYEGLEVINP 50


>gb|AFW88832.1| putative oxysterol binding domain family protein [Zea mays]
          Length = 234

 Score = 89.4 bits (220), Expect(3) = 2e-39
 Identities = 40/50 (80%), Positives = 47/50 (94%)
 Frame = +1

Query: 385 QGRWKEEDRNSYWKIMQKYIGSDVTSLVSLPVLICEPMTNLQKMAEIMEY 534
           +GRWK+EDR+SYWK+M KYIGSDVTSLV+LPV+I EPMT LQKMAE+MEY
Sbjct: 63  RGRWKQEDRDSYWKMMHKYIGSDVTSLVTLPVIIFEPMTMLQKMAELMEY 112



 Score = 87.4 bits (215), Expect(3) = 2e-39
 Identities = 36/44 (81%), Positives = 43/44 (97%)
 Frame = +2

Query: 611 LLDRADECEDPYMQMVYASSWAVSVFYAFRRAWKPFNPILGETY 742
           LLD+ADECEDPYM+MVYAS+WAVSV++A++R WKPFNPILGETY
Sbjct: 115 LLDKADECEDPYMRMVYASTWAVSVYFAYQRTWKPFNPILGETY 158



 Score = 33.1 bits (74), Expect(3) = 2e-39
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 210 MQKSVTGMLSYEGLEVINP 266
           + KSV G+L YEGLEVINP
Sbjct: 32  VHKSVNGLLGYEGLEVINP 50


>ref|XP_002882612.1| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328452|gb|EFH58871.1| oxysterol-binding family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 456

 Score = 90.5 bits (223), Expect(3) = 3e-39
 Identities = 40/51 (78%), Positives = 48/51 (94%)
 Frame = +1

Query: 385 QGRWKEEDRNSYWKIMQKYIGSDVTSLVSLPVLICEPMTNLQKMAEIMEYS 537
           +GRWK+EDR+ YWK+MQKYIGSDVTS+V+LPV+I EPMT LQKMAE+MEYS
Sbjct: 61  RGRWKQEDRDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYS 111



 Score = 85.9 bits (211), Expect(3) = 3e-39
 Identities = 37/44 (84%), Positives = 41/44 (93%)
 Frame = +2

Query: 611 LLDRADECEDPYMQMVYASSWAVSVFYAFRRAWKPFNPILGETY 742
           LLD ADE EDPYM+MVYASSWA+SV+YAF+R WKPFNPILGETY
Sbjct: 113 LLDMADETEDPYMRMVYASSWAISVYYAFQRTWKPFNPILGETY 156



 Score = 32.7 bits (73), Expect(3) = 3e-39
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 210 MQKSVTGMLSYEGLEVINP 266
           M KSV G++ YEGLEVINP
Sbjct: 30  MTKSVNGLVPYEGLEVINP 48


Top