BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006857
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534116.1| protein farnesyltransferase alpha subunit, p...   429   e-118
ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geran...   422   e-116
ref|XP_002310440.1| predicted protein [Populus trichocarpa] gi|2...   420   e-115
ref|NP_001240249.1| uncharacterized protein LOC100790130 [Glycin...   419   e-115
gb|ACU24085.1| unknown [Glycine max]                                  414   e-113

>ref|XP_002534116.1| protein farnesyltransferase alpha subunit, putative [Ricinus
            communis] gi|223525828|gb|EEF28267.1| protein
            farnesyltransferase alpha subunit, putative [Ricinus
            communis]
          Length = 333

 Score =  429 bits (1102), Expect = e-118
 Identities = 202/332 (60%), Positives = 251/332 (75%)
 Frame = -1

Query: 1080 IPLSQRAEWSDVNPVPQDDGPNPVVPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 901
            +PLSQR EWSDV PV QDDGPNPVVPIA                                
Sbjct: 13   VPLSQRPEWSDVIPVQQDDGPNPVVPIAYKPEFEETMNYFRAIYLSDERSPRALQ----- 67

Query: 900  XXXXXXXXXXLTTEAIHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQI 721
                      LT   I  N GNYTVWHFRRLVLE L  +L++EL ++E +AK N+KNYQI
Sbjct: 68   ----------LTHLVILLNPGNYTVWHFRRLVLEALNAELYEELDYIERVAKKNTKNYQI 117

Query: 720  WHHRRWVAEKLGTEVTGLELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKL 541
            WHHRRWVAEKLGT+    EL+FT+ ILSLDAKNYHAWSHRQWVLQALGGWE ELDYC +L
Sbjct: 118  WHHRRWVAEKLGTDAAAKELQFTRKILSLDAKNYHAWSHRQWVLQALGGWEDELDYCRQL 177

Query: 540  LEEDVFNNSAWNQRHFVVTRSPLLGGLEAMRDSEVKYTIEAILSNPENESPWRYLRGLYK 361
            LE DVFNNSAWNQR+F++TRSPLLGGL+A+R+SE+K+T+EAIL+NPENESPWRYLRGLY+
Sbjct: 178  LEHDVFNNSAWNQRYFIITRSPLLGGLKAVRESEMKFTVEAILANPENESPWRYLRGLYQ 237

Query: 360  GDTLSFTHDPEISSMLLKVLKNKSNYVFALSLLLDLVCLGFEPSEELIHAVEPLRTSHPD 181
            GDT S+ +DP++SS+ LKVL  K+N++FALS+LLDL+C GF+ ++E+  +V+ LRTS+ D
Sbjct: 238  GDTQSWINDPQVSSVCLKVLSAKTNHIFALSMLLDLLCHGFQANQEIRDSVDALRTSNCD 297

Query: 180  PPDVNVARTICSVLETVDPMRSNYWTWRRSNI 85
            PP+ ++A+ +CS+LE VDPMR+NYW WR+S +
Sbjct: 298  PPEPDLAKAVCSLLEHVDPMRANYWIWRKSKL 329


>ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geranylgeranyltransferase
            type-1 subunit alpha [Vitis vinifera]
            gi|297743768|emb|CBI36651.3| unnamed protein product
            [Vitis vinifera]
          Length = 331

 Score =  422 bits (1085), Expect = e-116
 Identities = 201/331 (60%), Positives = 239/331 (72%)
 Frame = -1

Query: 1077 PLSQRAEWSDVNPVPQDDGPNPVVPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 898
            PLSQR EWSDV PVPQDDGPNPVVPIA                                 
Sbjct: 11   PLSQRPEWSDVTPVPQDDGPNPVVPIAYKDDFTETMDYFRAVYFADERSLRSLH------ 64

Query: 897  XXXXXXXXXLTTEAIHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQIW 718
                     +T EAIH NAGNYTVWHFRRL+L  L  DLH+EL+F++ +A  N KNYQIW
Sbjct: 65   ---------VTAEAIHMNAGNYTVWHFRRLILGALNADLHEELNFIKKVANGNPKNYQIW 115

Query: 717  HHRRWVAEKLGTEVTGLELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHKLL 538
            HHRRWVAEKLG++ T  EL+FTK ILSLDAKNYHAWSHRQWVLQ LGGWE ELDYC +LL
Sbjct: 116  HHRRWVAEKLGSDATSKELDFTKKILSLDAKNYHAWSHRQWVLQELGGWEDELDYCKQLL 175

Query: 537  EEDVFNNSAWNQRHFVVTRSPLLGGLEAMRDSEVKYTIEAILSNPENESPWRYLRGLYKG 358
            E+D+FNNSAWNQR+FV+T+SP LGGLEAMR+SEV YT+ AI++ PENESPWRYLRGLYK 
Sbjct: 176  EDDIFNNSAWNQRYFVITKSPFLGGLEAMRESEVNYTVGAIIAKPENESPWRYLRGLYKD 235

Query: 357  DTLSFTHDPEISSMLLKVLKNKSNYVFALSLLLDLVCLGFEPSEELIHAVEPLRTSHPDP 178
            D  S+ +DP++SS+ L VL  K N VFALS LLDL+C GF+PS++ I+AV+ L+T   D 
Sbjct: 236  DAQSWVNDPQVSSVCLTVLSAKRNTVFALSTLLDLLCHGFQPSQDFINAVDALKTPDLDQ 295

Query: 177  PDVNVARTICSVLETVDPMRSNYWTWRRSNI 85
             D N+A  +CSVL  +DPMR NYW WR++ +
Sbjct: 296  SDSNLATAVCSVLGHMDPMRVNYWAWRKNKL 326


>ref|XP_002310440.1| predicted protein [Populus trichocarpa] gi|222853343|gb|EEE90890.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  420 bits (1079), Expect = e-115
 Identities = 202/335 (60%), Positives = 243/335 (72%)
 Frame = -1

Query: 1083 RIPLSQRAEWSDVNPVPQDDGPNPVVPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 904
            ++ LSQ  EW+DV P+PQDDGPNPVVPI                                
Sbjct: 7    KLRLSQDPEWADVTPIPQDDGPNPVVPI---------------DYKPDFIETMGYFRAVY 51

Query: 903  XXXXXXXXXXXLTTEAIHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQ 724
                       LT +AI  N GNYTVWHFRRL+L+ LG+DL++EL+F+  I++ N KNYQ
Sbjct: 52   KANEFSPRALQLTHQAILLNPGNYTVWHFRRLILDALGIDLNEELNFMSGISESNPKNYQ 111

Query: 723  IWHHRRWVAEKLGTEVTGLELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHK 544
            IWHHRRW+AEKLGT+    ELEFT+ +LSLDAKNYHAWSHRQWVLQALGGWE ELDYCH+
Sbjct: 112  IWHHRRWIAEKLGTDAASKELEFTRRMLSLDAKNYHAWSHRQWVLQALGGWENELDYCHQ 171

Query: 543  LLEEDVFNNSAWNQRHFVVTRSPLLGGLEAMRDSEVKYTIEAILSNPENESPWRYLRGLY 364
            LLE+DVFNNSAWNQR+FVVTRSP LGGLEA R+SEVKYTIE IL NP NESPWRYLRGLY
Sbjct: 172  LLEKDVFNNSAWNQRYFVVTRSPFLGGLEATRESEVKYTIETILGNPGNESPWRYLRGLY 231

Query: 363  KGDTLSFTHDPEISSMLLKVLKNKSNYVFALSLLLDLVCLGFEPSEELIHAVEPLRTSHP 184
            K D  S+  DP++SS+ LKVL  ++N+VFALS LLDL+  GF+ ++E   AV+ LR S+ 
Sbjct: 232  KNDPKSWISDPQVSSVCLKVLSAEANHVFALSTLLDLLSHGFQANQEFRDAVDSLRPSNS 291

Query: 183  DPPDVNVARTICSVLETVDPMRSNYWTWRRSNIAS 79
            DP D ++A+TICS+L  VDPMR NYWTWR+S + S
Sbjct: 292  DPADSDIAKTICSILRHVDPMRVNYWTWRKSKLPS 326


>ref|NP_001240249.1| uncharacterized protein LOC100790130 [Glycine max]
            gi|255641545|gb|ACU21046.1| unknown [Glycine max]
          Length = 346

 Score =  419 bits (1078), Expect = e-115
 Identities = 200/344 (58%), Positives = 249/344 (72%), Gaps = 11/344 (3%)
 Frame = -1

Query: 1083 RIPLSQRAEWSDVNPVPQDDGPNPVVPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 904
            R+PL +R EWSDV PVPQ+DGPNPVVPI                                
Sbjct: 14   RVPLRERVEWSDVTPVPQNDGPNPVVPIQYTEEFSEVMDYFRAVYLTDERSPRALA---- 69

Query: 903  XXXXXXXXXXXLTTEAIHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQ 724
                       LT EA+ FN+GNYTVWHFRRL+LE+L VDL+DEL FVE +A  NSKNYQ
Sbjct: 70   -----------LTAEAVQFNSGNYTVWHFRRLLLESLKVDLNDELEFVERMAAGNSKNYQ 118

Query: 723  IWHHRRWVAEKLGTEVTGLELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHK 544
            +WHHRRWVAEKLG E    ELEFTK ILS+DAK+YHAWSHRQW LQ LGGWE EL+YC +
Sbjct: 119  MWHHRRWVAEKLGPEARNNELEFTKKILSVDAKHYHAWSHRQWALQTLGGWEDELNYCTE 178

Query: 543  LLEEDVFNNSAWNQRHFVVTRSPLLGGLEAMRDSEVKYTIEAILSNPENESPWRYLRGLY 364
            LL+ED+FNNSAWNQR+FV+TRSP LGGL+AMR+SEV YTIEAI++ PENES WRYLRGLY
Sbjct: 179  LLKEDIFNNSAWNQRYFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRGLY 238

Query: 363  KGDTLSFTHDPEISSMLLKVLKNKSNYVFALSLLLDLVCLGFEPSEELIHAVEPLRTSHP 184
            KG+T S+ +DP++SS+ LK+L+ KSNYVFALS +LDL+C G++P+E++  A++ L+T+  
Sbjct: 239  KGETTSWVNDPQVSSVCLKILRTKSNYVFALSTILDLICFGYQPNEDIRDAIDALKTADM 298

Query: 183  DPPD-----------VNVARTICSVLETVDPMRSNYWTWRRSNI 85
            D  D           +N+AR ICS+L+ VDP+R+NYW WR+S +
Sbjct: 299  DKQDLDDDEKGEQQNLNIARNICSILKQVDPIRTNYWIWRKSRL 342


>gb|ACU24085.1| unknown [Glycine max]
          Length = 340

 Score =  414 bits (1065), Expect = e-113
 Identities = 200/344 (58%), Positives = 249/344 (72%), Gaps = 11/344 (3%)
 Frame = -1

Query: 1083 RIPLSQRAEWSDVNPVPQDDGPNPVVPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 904
            R+PL +RAEWSDV P+PQ+DGPNPVVPI                                
Sbjct: 8    RVPLRERAEWSDVTPLPQNDGPNPVVPIQYTEDFSQVMDYFRAVYLADERSPRALA---- 63

Query: 903  XXXXXXXXXXXLTTEAIHFNAGNYTVWHFRRLVLETLGVDLHDELSFVESIAKVNSKNYQ 724
                       LT EA+ FN+GNYTVWHFRRL+LE+L VDL+ EL FVE +A  NSKNYQ
Sbjct: 64   -----------LTAEAVQFNSGNYTVWHFRRLLLESLKVDLNAELDFVERMAAGNSKNYQ 112

Query: 723  IWHHRRWVAEKLGTEVTGLELEFTKNILSLDAKNYHAWSHRQWVLQALGGWEGELDYCHK 544
            +WHHRRWVAEKLG E    ELEFTK ILS+DAK+YHAWSHRQWVLQALGGWE EL+YC +
Sbjct: 113  MWHHRRWVAEKLGPEARKNELEFTKKILSVDAKHYHAWSHRQWVLQALGGWEDELNYCTE 172

Query: 543  LLEEDVFNNSAWNQRHFVVTRSPLLGGLEAMRDSEVKYTIEAILSNPENESPWRYLRGLY 364
            LL+ED+FNNSAWNQR+FV+TRSP LGGL+AMR+SEV YTIEAI++ PENES WRYLRGLY
Sbjct: 173  LLKEDIFNNSAWNQRYFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRGLY 232

Query: 363  KGDTLSFTHDPEISSMLLKVLKNKSNYVFALSLLLDLVCLGFEPSEELIHAVEPLRTSHP 184
            KG+T S+ +DP++SS+ LK+L+ KSNYVFALS +LDL+C G+ P+E+   A++ L+T+  
Sbjct: 233  KGETTSWVNDPQVSSVCLKILRTKSNYVFALSTILDLICFGYLPNEDFRDAIDALKTADM 292

Query: 183  D-----------PPDVNVARTICSVLETVDPMRSNYWTWRRSNI 85
            D             ++N+A+ ICS+LE VDP+R+NYW WR+S +
Sbjct: 293  DKQNLDDNEKGEQQNLNIAQNICSILEQVDPIRTNYWIWRKSRL 336